Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90880
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:7080112:7086656:1 gene:SORBI_3001G091400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCCCCAATAAACCCAGCCATGCTTCAGGCCGGGACGCGGTTTTCTGGTCACAAGGA
ATGAACGCATATCTTATTGATAGGCTGCTTTACCATCAAGACAATGGGAACAGGGGTGAG
TCTAAATTCTCATCGGTGGCATATGATAGCATCATCAATGGTGTCGGTGATAAGTTCGGG
GTGACAATTGACCGGAACAATATAAAAAATCGCCTCAAGTATATCAAGGAATCGTTCCAT
GAGTGTAGGAACCTCCTTGGTGAAGATAGTCGGTTTAAGTGGTGCTCAGAGACCCGAAAA
TTCAAGGCTGATCCAAATGTTTGGAGGGAGTTGATCCAGAGAAAACCGGAAGCAAAAAAA
TGGATGATGAAGACAATTGACCATTATGATAGGTTAATGCTGTTATTTGGTAAGGATAGG
GAGAAACGTCCAGATGTCGAGAATTCAAAAGGTACTGCGAAGAAAAAGGCGCGAACAGAA
CCACCAAAGGGGAGACTTCATCGTACTCCATTAAATGGCAATGAGTCAGCTGTTGATGAA
AGTTTAGATAAGAAGGTGGACAAAATTGAGATCCCTGATGCGAGTATAACAAATTTGGAA
CTTGATTTGTCAGAATTGTGCAGAACTGATAATGGCATTGTTGCCATACCTGTTCGTGCC
AATTCATATGGTAAAGGTTTGCCCTATGCTCCTGAAAATTGGCCACACTCTGGAGACATA
TGGCACTGGAAAGTTGGAAGCAGGTCTTCTGGAGCAGGCCATTGGGCTGACAGGTATCTT
ATGCCACCATCCCGTTTTCGTGACGCTACTCCTAAGAAGTTACGATTTGCAAGTAGAGTA
CAAGTTGAAGAATTTGTTAAGAGAGAATTTCCGGATGTCGATCCTAGCACATTCTTTTCT
ATGTTTATCTGGAGGATCCCTGCTGAAGGATACAGGATCCAAAAAGGCACCCAGCAAGTG
TGGCACAATGAACCTGAACCTGTGGTGGCTGATCCAGGTGGTCTCTGCAAGGCTAGGAAT
AGCTTGTGCAACCTTGAAAGAGAAGGTTTTGTTGAATCATCACCAGCACGGGCTTGTAAT
ATCTGCTGCAAAGAGCCTGGTTTCTGTCGTGAGTGCTGCTGCCTTCTCTGTAACAAAACC
ATTGACTATTCTTTTGGAGGTTACAGTTTCATAAAATGTGAGGCAGTTGTGGAAGAGAAC
TTAATATGTGGGCATTCTGCACACCTTAATTGTGCTCTTCGAAGTTACATGGCTGGAACT
GTTGGGGGAGTTTTTGCCTTGGATGTCCAATATTTATGCAGGCTCTGTGATAACAAAATC
AACTTAATGACGCATGTGGAGAAACTCATGGAAACGTGCCAATCTCTTGAATCAAGGGAT
GAAATCGAACCTATGCTGAATTTGGGCTTATGCCTCTTGCGTGGCTCAAAACAAATGAGA
GCAAGAAGCTTGGAGAACCAAATGAGATCAGCAATGGAAAAGCTGGAATGTGGATTTGAC
CTTGCTGAAGTCTGGAAATTTGAAGGTGACGAGGGCAGGGCAACACTCAGTGCAGGAGAG
AATTCCCCACCTACCAGTGGTGTGACTGTGCTTGGGGCTCACCAAGTTCCTGAAACGGGT
GCACTTACAGGGCATCCTGATCTGATAGATCCACTGGGTGATAATGACTTTGAAACAGAT
ATAGAAAATCTTCCAGTGTTCATTACTGGAGATCAGAATGTTGCGTCTGCCAAATTTGAG
GATGAGATAGATCTTGCTCTTGAAGAACTGAAGAAATCTCAGGAAATGGAATATAACTTG
GCAGAGCAGAAGCTTTACGCTCAGAAAGACCGCATCCTCTGTCTGTACAGGGAGCTTGAT
ACTGAAAGGGCTCAGCTTGCAGATCCCATGCCCTTGTCTGATGCTTCAAATTATGGCGCA
ATGCTCGCTAATGTTCTACGCCTTGTGGACCAAATCAAGCGTGATGAGGAGAAATTTAAG
TCCATGCTGAAAGTTGCTGGTGGATTTGCGAAAGCACCACCAAACGTCATCAAGGAGCTG
TTCGGGTTACCTGCTGATAAGTAG

Peptide Sequence

PEP ID

EER90880
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:7080112:7086656:1 gene:SORBI_3001G091400 transcript:EER90880 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSPNKPSHASGRDAVFWSQGMNAYLIDRLLYHQDNGNRGESKFSSVAYDSIINGVGDKFG
VTIDRNNIKNRLKYIKESFHECRNLLGEDSRFKWCSETRKFKADPNVWRELIQRKPEAKK
WMMKTIDHYDRLMLLFGKDREKRPDVENSKGTAKKKARTEPPKGRLHRTPLNGNESAVDE
SLDKKVDKIEIPDASITNLELDLSELCRTDNGIVAIPVRANSYGKGLPYAPENWPHSGDI
WHWKVGSRSSGAGHWADRYLMPPSRFRDATPKKLRFASRVQVEEFVKREFPDVDPSTFFS
MFIWRIPAEGYRIQKGTQQVWHNEPEPVVADPGGLCKARNSLCNLEREGFVESSPARACN
ICCKEPGFCRECCCLLCNKTIDYSFGGYSFIKCEAVVEENLICGHSAHLNCALRSYMAGT
VGGVFALDVQYLCRLCDNKINLMTHVEKLMETCQSLESRDEIEPMLNLGLCLLRGSKQMR
ARSLENQMRSAMEKLECGFDLAEVWKFEGDEGRATLSAGENSPPTSGVTVLGAHQVPETG
ALTGHPDLIDPLGDNDFETDIENLPVFITGDQNVASAKFEDEIDLALEELKKSQEMEYNL
AEQKLYAQKDRILCLYRELDTERAQLADPMPLSDASNYGAMLANVLRLVDQIKRDEEKFK
SMLKVAGGFAKAPPNVIKELFGLPADK

Transcript Sequence

Transcript ID

EER90880
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:7080112:7086656:1 gene:SORBI_3001G091400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATTAGCACAAACCCTAGCACCGCCGCATAGTTCCTCGGGCCCCCAGCGACGGAGGGGCA
GTCCCACGCTCGGCGGCGGCGTCAGCGGCTCCCCCTCCCGCCCTCGCGCCCTCGCCTCCG
TACTCCGCGCACCGGCCGGCGACCCTGTGTACGCACCTCCCTCTCCCCTCCCGCCTCTGC
TGTACCGTGGGAGCTCGGCCAGCTGCTCAGGGTGGCCGGGCCTTGGCTCCGCCGGTGTCG
GGTAGGATCAGCACAGCCGGAGCTCAAAGGCGCCTGCGAAGTTTATTAAAGAATTTTAGG
TTCAACGGAATCCCCATGTCCCCCAATAAACCCAGCCATGCTTCAGGCCGGGACGCGGTT
TTCTGGTCACAAGGAATGAACGCATATCTTATTGATAGGCTGCTTTACCATCAAGACAAT
GGGAACAGGGGTGAGTCTAAATTCTCATCGGTGGCATATGATAGCATCATCAATGGTGTC
GGTGATAAGTTCGGGGTGACAATTGACCGGAACAATATAAAAAATCGCCTCAAGTATATC
AAGGAATCGTTCCATGAGTGTAGGAACCTCCTTGGTGAAGATAGTCGGTTTAAGTGGTGC
TCAGAGACCCGAAAATTCAAGGCTGATCCAAATGTTTGGAGGGAGTTGATCCAGAGAAAA
CCGGAAGCAAAAAAATGGATGATGAAGACAATTGACCATTATGATAGGTTAATGCTGTTA
TTTGGTAAGGATAGGGAGAAACGTCCAGATGTCGAGAATTCAAAAGGTACTGCGAAGAAA
AAGGCGCGAACAGAACCACCAAAGGGGAGACTTCATCGTACTCCATTAAATGGCAATGAG
TCAGCTGTTGATGAAAGTTTAGATAAGAAGGTGGACAAAATTGAGATCCCTGATGCGAGT
ATAACAAATTTGGAACTTGATTTGTCAGAATTGTGCAGAACTGATAATGGCATTGTTGCC
ATACCTGTTCGTGCCAATTCATATGGTAAAGGTTTGCCCTATGCTCCTGAAAATTGGCCA
CACTCTGGAGACATATGGCACTGGAAAGTTGGAAGCAGGTCTTCTGGAGCAGGCCATTGG
GCTGACAGGTATCTTATGCCACCATCCCGTTTTCGTGACGCTACTCCTAAGAAGTTACGA
TTTGCAAGTAGAGTACAAGTTGAAGAATTTGTTAAGAGAGAATTTCCGGATGTCGATCCT
AGCACATTCTTTTCTATGTTTATCTGGAGGATCCCTGCTGAAGGATACAGGATCCAAAAA
GGCACCCAGCAAGTGTGGCACAATGAACCTGAACCTGTGGTGGCTGATCCAGGTGGTCTC
TGCAAGGCTAGGAATAGCTTGTGCAACCTTGAAAGAGAAGGTTTTGTTGAATCATCACCA
GCACGGGCTTGTAATATCTGCTGCAAAGAGCCTGGTTTCTGTCGTGAGTGCTGCTGCCTT
CTCTGTAACAAAACCATTGACTATTCTTTTGGAGGTTACAGTTTCATAAAATGTGAGGCA
GTTGTGGAAGAGAACTTAATATGTGGGCATTCTGCACACCTTAATTGTGCTCTTCGAAGT
TACATGGCTGGAACTGTTGGGGGAGTTTTTGCCTTGGATGTCCAATATTTATGCAGGCTC
TGTGATAACAAAATCAACTTAATGACGCATGTGGAGAAACTCATGGAAACGTGCCAATCT
CTTGAATCAAGGGATGAAATCGAACCTATGCTGAATTTGGGCTTATGCCTCTTGCGTGGC
TCAAAACAAATGAGAGCAAGAAGCTTGGAGAACCAAATGAGATCAGCAATGGAAAAGCTG
GAATGTGGATTTGACCTTGCTGAAGTCTGGAAATTTGAAGGTGACGAGGGCAGGGCAACA
CTCAGTGCAGGAGAGAATTCCCCACCTACCAGTGGTGTGACTGTGCTTGGGGCTCACCAA
GTTCCTGAAACGGGTGCACTTACAGGGCATCCTGATCTGATAGATCCACTGGGTGATAAT
GACTTTGAAACAGATATAGAAAATCTTCCAGTGTTCATTACTGGAGATCAGAATGTTGCG
TCTGCCAAATTTGAGGATGAGATAGATCTTGCTCTTGAAGAACTGAAGAAATCTCAGGAA
ATGGAATATAACTTGGCAGAGCAGAAGCTTTACGCTCAGAAAGACCGCATCCTCTGTCTG
TACAGGGAGCTTGATACTGAAAGGGCTCAGCTTGCAGATCCCATGCCCTTGTCTGATGCT
TCAAATTATGGCGCAATGCTCGCTAATGTTCTACGCCTTGTGGACCAAATCAAGCGTGAT
GAGGAGAAATTTAAGTCCATGCTGAAAGTTGCTGGTGGATTTGCGAAAGCACCACCAAAC
GTCATCAAGGAGCTGTTCGGGTTACCTGCTGATAAGTAGTTCTAATATCAGACTTGCTTG
GAACTTAGCTATCGGTAGTTTACCATAGAATCGAACTTGGCTATGCTGTTGTATGTAGTT
CTAATATCAGACTTGCTTGGAACTTAGCTATCGGTAGTTTACCATAGAATCGAACTCCTA
TGCTGTTGTAGCTGTTGTAGTTGCATGAGTTGTACATCCTACCAACGGGTTACCCCATAA
GTCTGGTTTGGACCTGCTTGTGTTAAGAGTCATTAAATGTGACGTTCTAAATGGACCGAA
TCTGAACCATATAATCTGCTGTGGATCCAG