Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90848
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:6320646:6326795:1 gene:SORBI_3001G082000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGAGCTCCGGCGATGAAGGGCGCGTGGTGGTGGACCTCCGCTCCGCGGCGGAGTCG
GCGGCTGCCGACGAGGAGGCGCACGCCACGCCTCTCCACGAGATCGAGTCCCTATGCATG
CGCTGCGGCGAGAACGGCATCACGAGGCTTCTGCTGACGCTGATCCCGCACTTCCGAGAG
GTGGTTCTGATGGCCTTCGAATGCCCACATTGTGGTGAGAGGAACAATGAGATTCAGTTT
GCTGGACAGCTCCAACCTAAGGGATGTTGCTATAGCTTGAAGGTTCCGTTGGGGCAGAGT
GACATACTGAATCGTCAGGTTGTGAAGTCTGATTCAGCGACTATCAAGATTCCAGAGCTG
GACTTTGAGATTCCTCCCGAAGCTCAACGTGGAACACTTTCTACTGTGGAAGGGATTATT
ATGCGGGCTGTGGATGAGCTGCAGGCACTTCAAGATGAACGAAAGAAAGTGGATCCTCAG
AAGGCTGAAGCTATCGATCAATTTTTACTGAAGTTGAGATCTCTTGGGTCAGGAGAGGCT
GCATTCACCTTTATTCTTGATGACCCTGCAGGAAATAGCTTTATCGAGAACCCGCATGCT
CCATCATCAGATCCTTTACTATCTGTGAGATTCTACGAAAGGACTCGTGAACAACAAGCA
GCACTTGGTTTTCTGGCTGAACCACCAACAGAACAACCTGGAGAGGCTGTTTTGCCTGCT
TCAGCTGTGGAATCCAATTCTGATGGGTTGCAAAGCGTGCCCCATGGCTCAGTTGGAGCT
GTTGCAGGTCGTCGCGCTATAGCTCAGGGAAACCCTGACGAAGTTGCTGCAGCATTGTGT
AGATACTCAGCACCAGAAGAGGTTGATACTTTACCATCAACATGTGGGGCCTGTGGAACA
GAATGTGTCACGCGATTCTTTGCTACAAAAATCCCATATTTCCGGGAGGTTATTGTTATG
GCAACAACATGTGACATGTGTGGTTATCGCAATTCAGAGCTGAAGCCTGGGGGTGAAATT
CCAGCTAAGGGAAAGAAAATTACACTGCGTGTTCAAAACGCACGAGACCTTACTCGCGAT
GTCATAAAGTCAGATTCAGCTAGCGTGAAAGTACCTGAACTTGAGTTGGAGCTTTCAAGT
GGAACGTTGGGTGGTATGGTCACAACTGTTGAAGGTTTAATTGTGAAAATATGTGAGGCT
CTGGAGAGAATACATGGATTCCAATTGGGCGATAGCACACTGGAATGGAAAAAGAAGAAA
TGGGAGGATTTTAAGGAGAGATTATCCAAGCTTCTGAGTTTACAAGAGCCCTGGACTCTA
ATAATTGATGATGGATTGGCGGCTTCGTTTGTAGCCCCGGCTACTGATTCTTTAGAAGAT
GACAGCCAGCTAACCATGGAGGAGTATCAGAGGAGTTGGGAGCAGAATGAGGAACTTGGC
CTGAATGACATGGATACGTCCTCTGCAGACGCGGCTTACAACACGACCAGCACATGA

Peptide Sequence

PEP ID

EER90848
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:6320646:6326795:1 gene:SORBI_3001G082000 transcript:EER90848 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASSGDEGRVVVDLRSAAESAAADEEAHATPLHEIESLCMRCGENGITRLLLTLIPHFRE
VVLMAFECPHCGERNNEIQFAGQLQPKGCCYSLKVPLGQSDILNRQVVKSDSATIKIPEL
DFEIPPEAQRGTLSTVEGIIMRAVDELQALQDERKKVDPQKAEAIDQFLLKLRSLGSGEA
AFTFILDDPAGNSFIENPHAPSSDPLLSVRFYERTREQQAALGFLAEPPTEQPGEAVLPA
SAVESNSDGLQSVPHGSVGAVAGRRAIAQGNPDEVAAALCRYSAPEEVDTLPSTCGACGT
ECVTRFFATKIPYFREVIVMATTCDMCGYRNSELKPGGEIPAKGKKITLRVQNARDLTRD
VIKSDSASVKVPELELELSSGTLGGMVTTVEGLIVKICEALERIHGFQLGDSTLEWKKKK
WEDFKERLSKLLSLQEPWTLIIDDGLAASFVAPATDSLEDDSQLTMEEYQRSWEQNEELG
LNDMDTSSADAAYNTTST

Transcript Sequence

Transcript ID

EER90848
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:6320646:6326795:1 gene:SORBI_3001G082000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACTCGCTCCTGTTCTCGGTTCTCCCCGTTCGCTTCTCCCTTCCCCTCCCGCCGCGACGC
ATAGCCGCCAAACAAACTCCCGCAAAGCTGACGAGCACCATAGCCAAATCAACGCATAGC
GATATCCAGGAGCTTTCACAAAGCTGTCTCCGTCCACGAGTGCTCTAGCTGACACCTATC
GCCGGCGTCAATGGCGAGCTCCGGCGATGAAGGGCGCGTGGTGGTGGACCTCCGCTCCGC
GGCGGAGTCGGCGGCTGCCGACGAGGAGGCGCACGCCACGCCTCTCCACGAGATCGAGTC
CCTATGCATGCGCTGCGGCGAGAACGGCATCACGAGGCTTCTGCTGACGCTGATCCCGCA
CTTCCGAGAGGTGGTTCTGATGGCCTTCGAATGCCCACATTGTGGTGAGAGGAACAATGA
GATTCAGTTTGCTGGACAGCTCCAACCTAAGGGATGTTGCTATAGCTTGAAGGTTCCGTT
GGGGCAGAGTGACATACTGAATCGTCAGGTTGTGAAGTCTGATTCAGCGACTATCAAGAT
TCCAGAGCTGGACTTTGAGATTCCTCCCGAAGCTCAACGTGGAACACTTTCTACTGTGGA
AGGGATTATTATGCGGGCTGTGGATGAGCTGCAGGCACTTCAAGATGAACGAAAGAAAGT
GGATCCTCAGAAGGCTGAAGCTATCGATCAATTTTTACTGAAGTTGAGATCTCTTGGGTC
AGGAGAGGCTGCATTCACCTTTATTCTTGATGACCCTGCAGGAAATAGCTTTATCGAGAA
CCCGCATGCTCCATCATCAGATCCTTTACTATCTGTGAGATTCTACGAAAGGACTCGTGA
ACAACAAGCAGCACTTGGTTTTCTGGCTGAACCACCAACAGAACAACCTGGAGAGGCTGT
TTTGCCTGCTTCAGCTGTGGAATCCAATTCTGATGGGTTGCAAAGCGTGCCCCATGGCTC
AGTTGGAGCTGTTGCAGGTCGTCGCGCTATAGCTCAGGGAAACCCTGACGAAGTTGCTGC
AGCATTGTGTAGATACTCAGCACCAGAAGAGGTTGATACTTTACCATCAACATGTGGGGC
CTGTGGAACAGAATGTGTCACGCGATTCTTTGCTACAAAAATCCCATATTTCCGGGAGGT
TATTGTTATGGCAACAACATGTGACATGTGTGGTTATCGCAATTCAGAGCTGAAGCCTGG
GGGTGAAATTCCAGCTAAGGGAAAGAAAATTACACTGCGTGTTCAAAACGCACGAGACCT
TACTCGCGATGTCATAAAGTCAGATTCAGCTAGCGTGAAAGTACCTGAACTTGAGTTGGA
GCTTTCAAGTGGAACGTTGGGTGGTATGGTCACAACTGTTGAAGGTTTAATTGTGAAAAT
ATGTGAGGCTCTGGAGAGAATACATGGATTCCAATTGGGCGATAGCACACTGGAATGGAA
AAAGAAGAAATGGGAGGATTTTAAGGAGAGATTATCCAAGCTTCTGAGTTTACAAGAGCC
CTGGACTCTAATAATTGATGATGGATTGGCGGCTTCGTTTGTAGCCCCGGCTACTGATTC
TTTAGAAGATGACAGCCAGCTAACCATGGAGGAGTATCAGAGGAGTTGGGAGCAGAATGA
GGAACTTGGCCTGAATGACATGGATACGTCCTCTGCAGACGCGGCTTACAACACGACCAG
CACATGATTTTTTTTTTAAGTTTTGTTGTGCTGAATGTATTTGTTATGCTAGCTTGTATC
ATTATCTATTTACTTTGGTAAACTCCCAGTGTGTATACTAATATCAACCACTTATATTTC
TTCTGACGATAAACATCGAGCGGCAATGCGTTGAACGATGTTTAGAACATTTTATAAGTT
CTGCGGAGCACCAGCTT