Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90821
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:5866980:5869676:1 gene:SORBI_3001G076200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGTCCCCGACGTCCTACCTCCTCCTGAACCCCTCAAAACCCTCCTCCTTCCGCTGG
CTCTCGGCCCCGGCCCCGCGCCTCCACGCCCGCCGGTTCCATGTCTCCTGCGATGCGCCG
CGGGGTAGCAGTGGCAGGAGTGGCGGCGGGAGGCGCGAGGCCATCCCCGCCGGCGCCAGC
AAGGCCAAGAAGCAGATTGTCTTCTTCGACGCCGCCCCTCCGGTGTCGCAGGAAGGCGGG
GCCGCCGTGGAGAAGGCGGGGGGTGAGAAGCCGACGACCAAGGTGGGCAGCGGCGGCAAC
GCGGCGCTGGCGTTATTGAGGAGGGCGACCAAGAGGACGCTCGCGGTGCTGTCCAACCTC
CCGCTCGCCATCTCCGAGATGTTCGCCATTGCCGCCCTCATGGCTCTAGGGACGGTGATT
GACCAGGGAGAGGCGCCGAGCTACTACTTCGAGAAGTTCCCCGAGGACAATCCGGTCTTC
GGCTTCATCACGTGGAGGTGGATCCTCACCCCCGGGTTCGACCACATGTTCTCCTCGCCG
GTCTTCCTCGGCCTCCTCGCGCTCCTCGCGACGTCCCTCATGGCCTGCACCTACACGACC
CAGCTCCCCATGGTCAAGGTCGCAAGAAGATGGTCGTTCACACATTCCGGAGAAAGAATA
CGGAAGCAGGAGTTTGCGGACTCTCTTCCCCGAGCATCCGTTCAGGATTTGGGAGTCATC
TTGATGGGTGCTGGATATGAGGTATTCACCAAGGGGCCATCTTTGTATGCTTTCAAAGGG
CTGGCTGGTCGGTATGCGCCTATTGGTGTGCACTTGGCAATGCTCTTCATCATGGCTGGT
GCCACGCTCAGTGCGACAGGAAGCTTTAAAGGCTCCGTGGATGTGCCTCAAGGGTTGAAC
TTTGTCATAGGAGATGTGATGAAACCTAGAGGAGTCCTGTCTGTTGCGCCAGATGTTTTC
AATACTGAAGTCCATGTCAACCGGTTCTACATGGAGTACTATGATAGTGGAGAGGTCTCA
CAATTTTACAGTGATCTCTCTCTATTCAACCTTGATGGTAAAGAAGTGATGAGAAAGACT
ATCAAAGTAAACGATCCCCTGAGATACGGAGGGATCACCATTTACCAGACAGACTGGGGA
TTTTCAGCATTGCAAGTGAAGAAAAATGGTGAGGGCCCTTTCAATTTGGCGATGGCCCCC
TTGAAACTGAATGGGGATAAGAAGCTCTTTGGTACATTCTTGCCACTTGAAGATGTGGAC
TCGTCGAATCCTAATGTCAAAGGAATATCAATGCTTGCTCGAGATTTGCAGTCTATTGTG
TTGTATGATCAAGAGGGTAAGTTTGTAGGGGTCCGCCGGCCAAGCTCGAAACTGCCTATT
GAGATCAATGGCAATGAAATACTCATTGAAGATGCTATTGGCAGCACTGGACTGGATCTT
AAGACTGATCCAGGAGTTCCTATTGTTTATGCTGGTTTTGGTGCGCTTATGTTAACGACC
TGCATTAGCTATCTTTCACACTCTCAGATATGGGCATTGCAAGATGGAAGTACAGTAGTC
GTTGGAGGGAAGACAAATCGAGCCAAACTTGAATTTTCTGAAGAGATGAACCGGCTACTT
GATAAAGTACCAGAGCTGATCAGTGCCGATGAGAATGTATTTGATACCAAATCGACTGCC
ACATGA

Peptide Sequence

PEP ID

EER90821
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:5866980:5869676:1 gene:SORBI_3001G076200 transcript:EER90821 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPSPTSYLLLNPSKPSSFRWLSAPAPRLHARRFHVSCDAPRGSSGRSGGGRREAIPAGAS
KAKKQIVFFDAAPPVSQEGGAAVEKAGGEKPTTKVGSGGNAALALLRRATKRTLAVLSNL
PLAISEMFAIAALMALGTVIDQGEAPSYYFEKFPEDNPVFGFITWRWILTPGFDHMFSSP
VFLGLLALLATSLMACTYTTQLPMVKVARRWSFTHSGERIRKQEFADSLPRASVQDLGVI
LMGAGYEVFTKGPSLYAFKGLAGRYAPIGVHLAMLFIMAGATLSATGSFKGSVDVPQGLN
FVIGDVMKPRGVLSVAPDVFNTEVHVNRFYMEYYDSGEVSQFYSDLSLFNLDGKEVMRKT
IKVNDPLRYGGITIYQTDWGFSALQVKKNGEGPFNLAMAPLKLNGDKKLFGTFLPLEDVD
SSNPNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEINGNEILIEDAIGSTGLDL
KTDPGVPIVYAGFGALMLTTCISYLSHSQIWALQDGSTVVVGGKTNRAKLEFSEEMNRLL
DKVPELISADENVFDTKSTAT

Transcript Sequence

Transcript ID

EER90821
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:5866980:5869676:1 gene:SORBI_3001G076200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTCTTCTCTTTTTCCACGGGAGAGTGGGATGACGAAGCCAGCGCGCGACGCCGCATCAC
TCCCTCGCCGCTCGCGCGCCCGGGCTCCTCCTTCCTGCCACGCCCTCGACGATGCCGTCC
CCGACGTCCTACCTCCTCCTGAACCCCTCAAAACCCTCCTCCTTCCGCTGGCTCTCGGCC
CCGGCCCCGCGCCTCCACGCCCGCCGGTTCCATGTCTCCTGCGATGCGCCGCGGGGTAGC
AGTGGCAGGAGTGGCGGCGGGAGGCGCGAGGCCATCCCCGCCGGCGCCAGCAAGGCCAAG
AAGCAGATTGTCTTCTTCGACGCCGCCCCTCCGGTGTCGCAGGAAGGCGGGGCCGCCGTG
GAGAAGGCGGGGGGTGAGAAGCCGACGACCAAGGTGGGCAGCGGCGGCAACGCGGCGCTG
GCGTTATTGAGGAGGGCGACCAAGAGGACGCTCGCGGTGCTGTCCAACCTCCCGCTCGCC
ATCTCCGAGATGTTCGCCATTGCCGCCCTCATGGCTCTAGGGACGGTGATTGACCAGGGA
GAGGCGCCGAGCTACTACTTCGAGAAGTTCCCCGAGGACAATCCGGTCTTCGGCTTCATC
ACGTGGAGGTGGATCCTCACCCCCGGGTTCGACCACATGTTCTCCTCGCCGGTCTTCCTC
GGCCTCCTCGCGCTCCTCGCGACGTCCCTCATGGCCTGCACCTACACGACCCAGCTCCCC
ATGGTCAAGGTCGCAAGAAGATGGTCGTTCACACATTCCGGAGAAAGAATACGGAAGCAG
GAGTTTGCGGACTCTCTTCCCCGAGCATCCGTTCAGGATTTGGGAGTCATCTTGATGGGT
GCTGGATATGAGGTATTCACCAAGGGGCCATCTTTGTATGCTTTCAAAGGGCTGGCTGGT
CGGTATGCGCCTATTGGTGTGCACTTGGCAATGCTCTTCATCATGGCTGGTGCCACGCTC
AGTGCGACAGGAAGCTTTAAAGGCTCCGTGGATGTGCCTCAAGGGTTGAACTTTGTCATA
GGAGATGTGATGAAACCTAGAGGAGTCCTGTCTGTTGCGCCAGATGTTTTCAATACTGAA
GTCCATGTCAACCGGTTCTACATGGAGTACTATGATAGTGGAGAGGTCTCACAATTTTAC
AGTGATCTCTCTCTATTCAACCTTGATGGTAAAGAAGTGATGAGAAAGACTATCAAAGTA
AACGATCCCCTGAGATACGGAGGGATCACCATTTACCAGACAGACTGGGGATTTTCAGCA
TTGCAAGTGAAGAAAAATGGTGAGGGCCCTTTCAATTTGGCGATGGCCCCCTTGAAACTG
AATGGGGATAAGAAGCTCTTTGGTACATTCTTGCCACTTGAAGATGTGGACTCGTCGAAT
CCTAATGTCAAAGGAATATCAATGCTTGCTCGAGATTTGCAGTCTATTGTGTTGTATGAT
CAAGAGGGTAAGTTTGTAGGGGTCCGCCGGCCAAGCTCGAAACTGCCTATTGAGATCAAT
GGCAATGAAATACTCATTGAAGATGCTATTGGCAGCACTGGACTGGATCTTAAGACTGAT
CCAGGAGTTCCTATTGTTTATGCTGGTTTTGGTGCGCTTATGTTAACGACCTGCATTAGC
TATCTTTCACACTCTCAGATATGGGCATTGCAAGATGGAAGTACAGTAGTCGTTGGAGGG
AAGACAAATCGAGCCAAACTTGAATTTTCTGAAGAGATGAACCGGCTACTTGATAAAGTA
CCAGAGCTGATCAGTGCCGATGAGAATGTATTTGATACCAAATCGACTGCCACATGAAAC
CTTTTTTTGTGTTTTTGTTTGGGGTTGCTGAAGATACAGTAGCTCTGTTCAGGAGAAAAC
AGAAGTTTGAATTCGCAAAACATGGCCTTCAAGAATAGAAAAACTCTTACAGTGTTTCAG
TAGAATGTAGATCACGCTTCAATTGAACTCTCTGTACATCTTCGAATGAGAAGATCACTG
TAAAAACAAAACTGATAGCTTGTTATGTTACCAATTTACCATACTTTAGAGCAAAATAAA
ACTGTAACCTTTGGTT