Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90654
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:2981544:2987118:1 gene:SORBI_3001G040100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGGTGATCGAGAAGATTCAGGAGGCCGCGGGGAATGGCCGGACGGCGTTCTCGTTC
GAGTACTTCCCTCCCAAGACGGAGGAGGGGGTCGAGAACCTGTTCGAGCGGATGGACCGC
ATGGTGGCGCACGGCCCCTCCTTCTGCGACATCACCTGGGGCGCCGGGGGATCCACCGCC
GACCTTACCCTCGAAATCGCCAACCGCATGCAGAACATGGTGTGTGTGGAAACTATGATG
CACCTGACATGTACAAACATGCCAGTAGAGAAGATTGACCATGCCTTGGAAACTATCAAA
TCCAATGGGATTCAAAATGTTTTGGCCCTTCGAGGGGATCCTCCACATGGACAAGACAAA
TTTGTGCAAGTTGAAGGCGGATTTGCTTGTGCTCTTGATTTGGTGCAGCATATTAGAGCC
AAGTATGGTGATTATTTTGGCATAACTGTAGCTGGTTATCCAGAGGCACACCCTGATGCG
ATACAAGGCGAGGGAGGTGCTACATTGGAAGCATATAGCAATGATCTTGCGTATTTGAAG
AGAAAGGTTGATGCTGGTGCTGACCTTATTGTTACACAACTTTTCTATGATACTGACATC
TTCCTCAAGTTTGTGAATGACTGCCGCCAAATTGGTATTACTTGTCCCATTGTTCCTGGC
ATAATGCCAATAAATAACTACAAAGGTTTCCTGCGCATGACTGGGTTCTGCAAAACTAAG
ATACCTTCTGAGATCACTGCTGCACTGGATCCTATTAAAGACAATGAGGAGGCTGTTAAA
CAATATGGGATTCACCTTGGAACTGAGATGTGCAAGAAAATTCTTGCTACTGGCATTAAG
ACTTTGCACCTTTACACACTAAACATGGACAAGTCTGCTATAGGAATTTTGATGAATCTT
GGATTAATTGAGGAGTCCAAGGTTTCAAGGCCATTACCTTGGAGGCCGGCAACTAATGTT
TTCCGTGTTAAAGAGGATGTTCGACCTATATTCTGGGCCAACAGACCAAAGAGCTATCTT
AAAAGGACATTAGGTTGGGATCAGTATCCCCATGGACGGTGGGGTGATTCTCGAAACCCA
TCATATGGAGCACTTACTGACCACCAGTTCACAAGACCACGTGGACGTGGTAAAAAGCTC
CAAGAGGAATGGGCTGTTCCACTTAAATCTGTGGAGGACATTAGTGAGCGCTTTACAAAC
TTCTGTCAAGGGAAACTCACAAGCAGCCCATGGTCAGAATTGGATGGTCTTCAACCAGAG
ACAAAGATTATTGATGACCAGTTGGTGAAGATTAACCAGAAGGGTTTCCTTACCATTAAC
AGCCAACCTGCTGTAAATGGAGAGAAATCCGACTCGCCTACTGTCGGTTGGGGTGGTCCT
GGAGGCTACGTTTATCAGAAGGCCTACCTCGAATTCTTCTGCGCAAAAGAGAAGTTGGAC
CAACTAATTGAGAAGATCAAAGCATTCCCTTCTCTCACTTACATTGCTGTGAACAAGGAT
GGAGAATCATTCTCCAATATTGCACCGAACGCCGTGAATGCTGTCACATGGGGTGTTTTC
CCTGGCAAGGAGATTATCCAGCCTACAGTTGTTGATCCAGCAAGTTTTATGGTTTGGAAG
GACGAAGCATTTGAAATCTGGACACGGGGGTGGGCTTGCCTGTTCCCTGAGGGCGACTCA
TCTAGGGAGCTACTAGAGAAGGTTCAGAAGAGCTACTACCTGGTCAGCCTCGTCGACAAC
GACTACGTCCAGGGGGATTTGTTTGCTGCCTTCAAGATCTGA

Peptide Sequence

PEP ID

EER90654
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:2981544:2987118:1 gene:SORBI_3001G040100 transcript:EER90654 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKVIEKIQEAAGNGRTAFSFEYFPPKTEEGVENLFERMDRMVAHGPSFCDITWGAGGSTA
DLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDK
FVQVEGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQGEGGATLEAYSNDLAYLK
RKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK
IPSEITAALDPIKDNEEAVKQYGIHLGTEMCKKILATGIKTLHLYTLNMDKSAIGILMNL
GLIEESKVSRPLPWRPATNVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHGRWGDSRNP
SYGALTDHQFTRPRGRGKKLQEEWAVPLKSVEDISERFTNFCQGKLTSSPWSELDGLQPE
TKIIDDQLVKINQKGFLTINSQPAVNGEKSDSPTVGWGGPGGYVYQKAYLEFFCAKEKLD
QLIEKIKAFPSLTYIAVNKDGESFSNIAPNAVNAVTWGVFPGKEIIQPTVVDPASFMVWK
DEAFEIWTRGWACLFPEGDSSRELLEKVQKSYYLVSLVDNDYVQGDLFAAFKI

Transcript Sequence

Transcript ID

EER90654
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:2981544:2987118:1 gene:SORBI_3001G040100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGCCCCCTCCCTCCGCTCCTCGCCTCGGCTCGCCATTAGAGCGCGCGCGCCAAGCTAGTG
GCGAGGTTTTCGAGATGAAGGTGATCGAGAAGATTCAGGAGGCCGCGGGGAATGGCCGGA
CGGCGTTCTCGTTCGAGTACTTCCCTCCCAAGACGGAGGAGGGGGTCGAGAACCTGTTCG
AGCGGATGGACCGCATGGTGGCGCACGGCCCCTCCTTCTGCGACATCACCTGGGGCGCCG
GGGGATCCACCGCCGACCTTACCCTCGAAATCGCCAACCGCATGCAGAACATGGTGTGTG
TGGAAACTATGATGCACCTGACATGTACAAACATGCCAGTAGAGAAGATTGACCATGCCT
TGGAAACTATCAAATCCAATGGGATTCAAAATGTTTTGGCCCTTCGAGGGGATCCTCCAC
ATGGACAAGACAAATTTGTGCAAGTTGAAGGCGGATTTGCTTGTGCTCTTGATTTGGTGC
AGCATATTAGAGCCAAGTATGGTGATTATTTTGGCATAACTGTAGCTGGTTATCCAGAGG
CACACCCTGATGCGATACAAGGCGAGGGAGGTGCTACATTGGAAGCATATAGCAATGATC
TTGCGTATTTGAAGAGAAAGGTTGATGCTGGTGCTGACCTTATTGTTACACAACTTTTCT
ATGATACTGACATCTTCCTCAAGTTTGTGAATGACTGCCGCCAAATTGGTATTACTTGTC
CCATTGTTCCTGGCATAATGCCAATAAATAACTACAAAGGTTTCCTGCGCATGACTGGGT
TCTGCAAAACTAAGATACCTTCTGAGATCACTGCTGCACTGGATCCTATTAAAGACAATG
AGGAGGCTGTTAAACAATATGGGATTCACCTTGGAACTGAGATGTGCAAGAAAATTCTTG
CTACTGGCATTAAGACTTTGCACCTTTACACACTAAACATGGACAAGTCTGCTATAGGAA
TTTTGATGAATCTTGGATTAATTGAGGAGTCCAAGGTTTCAAGGCCATTACCTTGGAGGC
CGGCAACTAATGTTTTCCGTGTTAAAGAGGATGTTCGACCTATATTCTGGGCCAACAGAC
CAAAGAGCTATCTTAAAAGGACATTAGGTTGGGATCAGTATCCCCATGGACGGTGGGGTG
ATTCTCGAAACCCATCATATGGAGCACTTACTGACCACCAGTTCACAAGACCACGTGGAC
GTGGTAAAAAGCTCCAAGAGGAATGGGCTGTTCCACTTAAATCTGTGGAGGACATTAGTG
AGCGCTTTACAAACTTCTGTCAAGGGAAACTCACAAGCAGCCCATGGTCAGAATTGGATG
GTCTTCAACCAGAGACAAAGATTATTGATGACCAGTTGGTGAAGATTAACCAGAAGGGTT
TCCTTACCATTAACAGCCAACCTGCTGTAAATGGAGAGAAATCCGACTCGCCTACTGTCG
GTTGGGGTGGTCCTGGAGGCTACGTTTATCAGAAGGCCTACCTCGAATTCTTCTGCGCAA
AAGAGAAGTTGGACCAACTAATTGAGAAGATCAAAGCATTCCCTTCTCTCACTTACATTG
CTGTGAACAAGGATGGAGAATCATTCTCCAATATTGCACCGAACGCCGTGAATGCTGTCA
CATGGGGTGTTTTCCCTGGCAAGGAGATTATCCAGCCTACAGTTGTTGATCCAGCAAGTT
TTATGGTTTGGAAGGACGAAGCATTTGAAATCTGGACACGGGGGTGGGCTTGCCTGTTCC
CTGAGGGCGACTCATCTAGGGAGCTACTAGAGAAGGTTCAGAAGAGCTACTACCTGGTCA
GCCTCGTCGACAACGACTACGTCCAGGGGGATTTGTTTGCTGCCTTCAAGATCTGATGAT
GCTGTTATGCTCTGTGTTGTTGTATGGCTGAATCACAATATTCTTGCTTCCCCGACTACA
GGTCTGATCGCATGTGAAAGCTTCTGTTCATTTGAGCTCGGGGGAGTCCGCTAGTCTTAC
TTTTCCTGATTTCTTTTGGCTTACTGGAACCATACGATATATCAATAAGAAATGAGTTGT
GTTCACTTTACATTTTCTCCATGTGCAAATGGCGCAATGGGTAGTTTTAAGATGTAAAAT
TCGTCCTCCAATACAGGTTGGTATTGTATCTTAGTTAGAAGGATGCGCTGCCCGCGTTGC
GCTGTATTTGTGCTTCTGCTTGGTGGAAATAAGATTGATCCAATTCTGATGTTC