Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90650
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:2932598:2937249:1 gene:SORBI_3001G039300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACACAAGCTAAGCCTGCCCCTGGTGGCAAGAGGAACTGGAGCAGTAGTGGGACTGCC
GCTGGAAGGAAGAACAAGGATAGAGGAGATGACAAAGCAAAAGGAACCAGGGTTGCTGGT
TGGAACAAGGGCGACAAGAAGAAAGAAGACAGAGGGCGCCAAGTAAGCGTGGGATCGACG
AGGGGACGGAGTGAGGGAGTGCCCCGGGTTGGTATGAAGAGGGCTGTGTCTGGGCTTGAC
AGGAGGAAAAGGAAGATCGATGACGACTCGTGGGATGGTGGTGGCGGTGGTGGCAAGAAT
GTTTCGTCTTCCAAATCAAGGTTTTCCAGAAAGACTGCTTCCACGATAAGCCACCGAAAG
GTTTCTCCTGGAAAAGATGACAGATTGAAGTCTCAGAGTTTGTATGAGGATGACTACCGT
GCAGGGAAAAGGAGTACCAGCAAAGTTTCTGATATTAGTAGAGGGATCAAGAGTCGACTG
GTGAACTCTGTAGCATCCAAAGGGAAGAAGTTCGATGCAACCAAAGAAGTCAGGCGTACA
AAGAAGGGTGGTGCTAAAGAAGTTGATTTGGATGAGGAAGCTGCTGATAGCAACAAGTCA
GATGACTCGGGTCTTATTACTGAAGAAGAGAAGCCTCGCCCTCGCCTAACTCGAGTACTG
GACCGGACTGGGAAGAAAATAAAGCCTGCTAAGAAGGTTGTAGTTCCTGACATTGAGGAA
CCTGCTCCTCCTAAGAAGAGAAAGCGAATGAAGCTAGATCCTTATGATACTTCGAACAAA
AGGATTGAAGATTCTCCTATCCAGGATGTTTCCAGTGCAGCGAAGGTTCTCGTGAATTGT
ACACCTGAAGAAGAGACTGAAATGTCAATAAATGCAAAATTTCGTGCTATACAGCCAAGT
TCCTCAATCCTTTCATATGTGGAAGATAATTTACTAGGTCGTAGGCGTTTAAATGAGATA
AAAAATGCTGGCTACAATGTCAAGATTTCTTCTCCTCTGGATAATGTTCCTTTCTCAACC
AGCACAGAACGTGAACGCATAGAAGAAAGTGAGTTCAGAAATAAGCTGGAGTTCTTTGCT
GCTGCAAAGATCTCTTCCTCATTCCCCGCTCCAACGCTCCCAGAGATAGCATTTGCAGGT
GTATCAAATGTTGGTAAATCCTCACTCCTCAATTCACTTACAAGACAGTGGGGTGTTGTG
CGAACATCAGATAAGCCTGGACTTACTCAGACAATAAATTTCTTTCGACTTGCATCAAAG
TTATGTCTTGTTGATTTACCTGGATATGGTTTTGCTTATGCAAAGGACGAAGTTAAGGAG
TCGTGGGAGGAGCTTGTGAAGGAATATGTTTCGACCAGAGTTGGCCTAGAAAGAGTGTGC
CTTCTTGTTCACACTAAACGAGGAATGAAACCATTGGACTATGAGCTTGTAGATTTAATG
GAAAGGCACAAGACGCCATACCAGATTGTACTGACAAAGACTGATTTAGTTTTCCCAATA
GATGTCGCTCGCCGTGCCATGGAAATCCAAGAGAGCCTGAAGAGGAACAAGTCAGTGGTA
AACCCAGTGATGATGGTGAGCTCTAAAACAGGAGCTGGCATCCGCAACCTGAGAGGGGTG
CTGGGAAAGTTAGCTCGCTTCATCAAACCGTAG

Peptide Sequence

PEP ID

EER90650
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:2932598:2937249:1 gene:SORBI_3001G039300 transcript:EER90650 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTQAKPAPGGKRNWSSSGTAAGRKNKDRGDDKAKGTRVAGWNKGDKKKEDRGRQVSVGST
RGRSEGVPRVGMKRAVSGLDRRKRKIDDDSWDGGGGGGKNVSSSKSRFSRKTASTISHRK
VSPGKDDRLKSQSLYEDDYRAGKRSTSKVSDISRGIKSRLVNSVASKGKKFDATKEVRRT
KKGGAKEVDLDEEAADSNKSDDSGLITEEEKPRPRLTRVLDRTGKKIKPAKKVVVPDIEE
PAPPKKRKRMKLDPYDTSNKRIEDSPIQDVSSAAKVLVNCTPEEETEMSINAKFRAIQPS
SSILSYVEDNLLGRRRLNEIKNAGYNVKISSPLDNVPFSTSTERERIEESEFRNKLEFFA
AAKISSSFPAPTLPEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTINFFRLASK
LCLVDLPGYGFAYAKDEVKESWEELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLM
ERHKTPYQIVLTKTDLVFPIDVARRAMEIQESLKRNKSVVNPVMMVSSKTGAGIRNLRGV
LGKLARFIKP

Transcript Sequence

Transcript ID

EER90650
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:2932598:2937249:1 gene:SORBI_3001G039300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTACGTTCACCTTCACCCGCGTGCGCTCTCTCTGTGCGACGACTGTCCACTGGGTTCGCT
ACCGCCGCCACCGTCGCCGTGCCCTACGCCAGGTGCAGAGGCCTTTCGTCGGTCTCTTCG
CCGGCGGCGAGCTTCCACAAGGTATTCCCACCCCTTCTCTTCCTTTCCTGCTGTGCGAAA
CCGAGAACCCAAACCCTAACTCTATTTGCCTATTTGATGCCTACTAACTTCGATTTTTTT
TTTTTTTGTAAAAATTATCGGGTGTGCATTGTACACCCATGTCCCTTTACTGGTTCTGCC
CCTGCCCTAGGTGCTACGCACGCAGTACATTTTCCAAGAGATTTTGGTGTTGAACTCACC
CATGACACAAGCTAAGCCTGCCCCTGGTGGCAAGAGGAACTGGAGCAGTAGTGGGACTGC
CGCTGGAAGGAAGAACAAGGATAGAGGAGATGACAAAGCAAAAGGAACCAGGGTTGCTGG
TTGGAACAAGGGCGACAAGAAGAAAGAAGACAGAGGGCGCCAAGTAAGCGTGGGATCGAC
GAGGGGACGGAGTGAGGGAGTGCCCCGGGTTGGTATGAAGAGGGCTGTGTCTGGGCTTGA
CAGGAGGAAAAGGAAGATCGATGACGACTCGTGGGATGGTGGTGGCGGTGGTGGCAAGAA
TGTTTCGTCTTCCAAATCAAGGTTTTCCAGAAAGACTGCTTCCACGATAAGCCACCGAAA
GGTTTCTCCTGGAAAAGATGACAGATTGAAGTCTCAGAGTTTGTATGAGGATGACTACCG
TGCAGGGAAAAGGAGTACCAGCAAAGTTTCTGATATTAGTAGAGGGATCAAGAGTCGACT
GGTGAACTCTGTAGCATCCAAAGGGAAGAAGTTCGATGCAACCAAAGAAGTCAGGCGTAC
AAAGAAGGGTGGTGCTAAAGAAGTTGATTTGGATGAGGAAGCTGCTGATAGCAACAAGTC
AGATGACTCGGGTCTTATTACTGAAGAAGAGAAGCCTCGCCCTCGCCTAACTCGAGTACT
GGACCGGACTGGGAAGAAAATAAAGCCTGCTAAGAAGGTTGTAGTTCCTGACATTGAGGA
ACCTGCTCCTCCTAAGAAGAGAAAGCGAATGAAGCTAGATCCTTATGATACTTCGAACAA
AAGGATTGAAGATTCTCCTATCCAGGATGTTTCCAGTGCAGCGAAGGTTCTCGTGAATTG
TACACCTGAAGAAGAGACTGAAATGTCAATAAATGCAAAATTTCGTGCTATACAGCCAAG
TTCCTCAATCCTTTCATATGTGGAAGATAATTTACTAGGTCGTAGGCGTTTAAATGAGAT
AAAAAATGCTGGCTACAATGTCAAGATTTCTTCTCCTCTGGATAATGTTCCTTTCTCAAC
CAGCACAGAACGTGAACGCATAGAAGAAAGTGAGTTCAGAAATAAGCTGGAGTTCTTTGC
TGCTGCAAAGATCTCTTCCTCATTCCCCGCTCCAACGCTCCCAGAGATAGCATTTGCAGG
TGTATCAAATGTTGGTAAATCCTCACTCCTCAATTCACTTACAAGACAGTGGGGTGTTGT
GCGAACATCAGATAAGCCTGGACTTACTCAGACAATAAATTTCTTTCGACTTGCATCAAA
GTTATGTCTTGTTGATTTACCTGGATATGGTTTTGCTTATGCAAAGGACGAAGTTAAGGA
GTCGTGGGAGGAGCTTGTGAAGGAATATGTTTCGACCAGAGTTGGCCTAGAAAGAGTGTG
CCTTCTTGTTCACACTAAACGAGGAATGAAACCATTGGACTATGAGCTTGTAGATTTAAT
GGAAAGGCACAAGACGCCATACCAGATTGTACTGACAAAGACTGATTTAGTTTTCCCAAT
AGATGTCGCTCGCCGTGCCATGGAAATCCAAGAGAGCCTGAAGAGGAACAAGTCAGTGGT
AAACCCAGTGATGATGGTGAGCTCTAAAACAGGAGCTGGCATCCGCAACCTGAGAGGGGT
GCTGGGAAAGTTAGCTCGCTTCATCAAACCGTAGCAAAAGCTGCAGCCAACTTTGGACTC
TGCATCAGTGGAGACCGTGGGAGGAGATTTGCATCGGGCTGTCTTAAGTAGGTGCTGTGC
TACGTCAACGCTCTAAACAGTCCACCGGCAGAAGCTTTGGCTGCATCAGTTGAGACTATC
CAGACTTGCAGCAAGCATTCCTAGGAAGGTTATGATTTGTAGCCTAGCTGTATCACAGGC
TCAGATTCAGGTAGGATTGAACTGTTCAACTTTTGAGTGGATTATGCGATGCAGGGATCA
CACTCACAGATTAATTCCATGAAATAATTGGGTTTCACCATTTGGATAGTGCCAAATTGC
ACCTTTAATCTGTTATGCATCGTTCCTTGATGTACAATACATCTTCAGTGGTGATTCATC
AGTCATTGATGTTTCATGTTC