Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90625
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:2620628:2626806:1 gene:SORBI_3001G034500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGAATGCAAGCAAGCACTTGCAACCTTCAAGCAATGCAGGCAATGACAGGAAGTAC
CAGGGCACGTTGGTCGCTTCTCCAGCAAAGGCCATTGCGCCTAAGTGTGTGAACCGCATC
ATGCCATCGAAGCAACTGATCTTGGGTGGGGATTCAATAGGCCATGTGGCATCATTTCTG
ATTAAAGTCGTTGCTCTTGAGGCAGTCAGAAGAGTTTCTAAAGCAAGATGCCCTTTCATT
TGGAATTCTGTTCAAGCATTGCAGATCCTTGTGTATCCTCCATTTAGTTGGATCCAAAGA
TGGGCACCACTCAAATTTCTCGTGCAGGGAATTCAGAAACTATCCATGCCACTGTTGTTT
CTGTCAGTCACAACAACAGTAAGTGAGCTGTCTTCCAAGCGCGACGATGAACCAGATAAC
AATACAGAACATTCCGAGACGCCTTCTGAAACAAATGAAGTGGCATCAACTTCTGGTACA
AGCGATGCTGCTGATGGCACAAAGGAAATCGTGCAAGAGAACTGGCTTGTGTTACTTTTC
AGGGAGCTTGAGAAGCAAGGCATCACTTTGCCCGAGAGGTTTACTGAAGATGAGTTACGC
AGATTTTATGTCGCTGCAAATGGTGACTTTTCAAGTTTACTCTCATCGGTTAAGAAGACA
ATTCGTTGGAGGGAAACATTTCACATACTTACATTGCAAGAACTTGATAAATGGTCTCAC
TTAGTCTTTTGGCATGGATTTGACACGATGCTTCGGCCTTGTTTAGTAATTCGTCTCGGA
CTTGCATGCTCCAGCATACCACCTCGTGACAGACCCCGTTTCGGGCAAGCAGTAGTTTCT
CAAATTGACCATGGTGTTGTAAATTTGACCAATGAAGAAGATTCAAGAATTACCGTTTTG
CTGGATTGCCATGGGATTTCTCCATTCAGATTTCCAATGCAAATGATGAGGTCATTTATC
ACTGTAGTTCAAGAAAATTACCCGAATCGTCTTGGTGTATTGTTTGTTATCCGCCTTCCT
CCAGTTGTCAGAGTTATTGCACAGACATTTCTTCAAGTTTTGAAACCATCAACAAAGCAG
AAGTTACGTTTCGAGGGAGATTCATACAAGAAGACATTGGCAGAGTTCTTGCAGGTTGTG
CCAGCGTTTCTGGGCGGTAAATGCAGCTGCCCACAATGTGAGAAGCCTCGTAATAGTTCA
GTGATACAGGCTGGGGAAGGGAGCAAGAGCCAGCCTCGCTTGGTCAGCGTTGATGACGGA
TCGCCTGTCACAGACTTCGACTTCGATGAAGAAGAGATCCCATCAGCCTATAGCTGCGAG
AACGCCATCAGGGCTGCAATAATTGGCCTGCTGATGATGTGCATCTTCGTTGCGTTTCTG
GCTGGGATGAACGATCCCACATCTGTTTCGCCCAGTGCCCAGTGA

Peptide Sequence

PEP ID

EER90625
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:2620628:2626806:1 gene:SORBI_3001G034500 transcript:EER90625 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MANASKHLQPSSNAGNDRKYQGTLVASPAKAIAPKCVNRIMPSKQLILGGDSIGHVASFL
IKVVALEAVRRVSKARCPFIWNSVQALQILVYPPFSWIQRWAPLKFLVQGIQKLSMPLLF
LSVTTTVSELSSKRDDEPDNNTEHSETPSETNEVASTSGTSDAADGTKEIVQENWLVLLF
RELEKQGITLPERFTEDELRRFYVAANGDFSSLLSSVKKTIRWRETFHILTLQELDKWSH
LVFWHGFDTMLRPCLVIRLGLACSSIPPRDRPRFGQAVVSQIDHGVVNLTNEEDSRITVL
LDCHGISPFRFPMQMMRSFITVVQENYPNRLGVLFVIRLPPVVRVIAQTFLQVLKPSTKQ
KLRFEGDSYKKTLAEFLQVVPAFLGGKCSCPQCEKPRNSSVIQAGEGSKSQPRLVSVDDG
SPVTDFDFDEEEIPSAYSCENAIRAAIIGLLMMCIFVAFLAGMNDPTSVSPSAQ

Transcript Sequence

Transcript ID

EER90625
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:2620628:2626806:1 gene:SORBI_3001G034500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAGCGACCACGGACGAACCACCACCCCCACGCGTAGCACGAGAAGGACCTGTCTGTTCT
GTTCTTCCGCCCCCACCCACGGCACGGATCTCTCTCTCTTCTTCTCGTCGTGCCCCGCGG
CCGCGGGAGTGTTCGTGTTCCTCACTCCTCCCGCTTCCTTCCCCGACACTCCCTCAGATC
CGCGCCCGTTTTCCCGATCCACGCGACGCGAGGGGGCATTCCAGCCCTAAAGCGGCCGGT
GAGCTGGCCTCCTTCCGCCGACGCGGACCACCTGGAGGGAATTTATCCTGGAGCCGTCTT
CCTCCTCGCCTCCTCTCGCGGCGCGGCGCGGAGGCGGGAGACACTCGGAGGTCCAGCTGT
GTTTGGATTGATTTCTTCGTCTGTGGGTAAGGAAGCACGGTTGGATCGCTCGGATGGTGG
ATTGTTCTACCTACGAGTGTTTTTTTTTGGCTCTATATATATGATCTTAGTATGTATATG
CAGTGACTAATCAACGATCGAATCTAGTTCAGTATTGCTGGGATGAATACTCCAGTCCAT
CCATCCATCCATCCATGCGGTTAGCTAAGCATTTGTTTGATGGATGGTGACTGGTGGGTT
TGTAATAATAGCTGTTATTTTCCAAATAGACTGGGTCTCAACCAACTGAAACCCCATTCC
CCTTGTTAAGTCCGCCCTTGCATGTGCTTGACAGCTTGAGGGGGTATGCAGCGATGTTTG
GGTTGTGTCAACCGCTATGCTTATACTAGGACATCGAAACTGCTCTGTTAGGCCTGAAAT
CGAAACCTTATATTACTTGTTTCTTTTGGTCATCGTAGTTAGGTATATTCAGTATGTTCT
TCCTGGGTTACCACTTCAGTTGTTGATATGCATTGCCTCTGCTTATTGCTACACATTTCT
TATGTTGACATAAATTTCCTCTGATAATCTTTTTGCAGTGGCTAGAGGCACCTGGTTTCT
TTTTGCTGAAGCTGGTGGTACATGTGAACAGCAGGGCCTGTCTTCTGTCTCTGCTTTTGC
TTCTAAGCAATGGCGAATGCAAGCAAGCACTTGCAACCTTCAAGCAATGCAGGCAATGAC
AGGAAGTACCAGGGCACGTTGGTCGCTTCTCCAGCAAAGGCCATTGCGCCTAAGTGTGTG
AACCGCATCATGCCATCGAAGCAACTGATCTTGGGTGGGGATTCAATAGGCCATGTGGCA
TCATTTCTGATTAAAGTCGTTGCTCTTGAGGCAGTCAGAAGAGTTTCTAAAGCAAGATGC
CCTTTCATTTGGAATTCTGTTCAAGCATTGCAGATCCTTGTGTATCCTCCATTTAGTTGG
ATCCAAAGATGGGCACCACTCAAATTTCTCGTGCAGGGAATTCAGAAACTATCCATGCCA
CTGTTGTTTCTGTCAGTCACAACAACAGTAAGTGAGCTGTCTTCCAAGCGCGACGATGAA
CCAGATAACAATACAGAACATTCCGAGACGCCTTCTGAAACAAATGAAGTGGCATCAACT
TCTGGTACAAGCGATGCTGCTGATGGCACAAAGGAAATCGTGCAAGAGAACTGGCTTGTG
TTACTTTTCAGGGAGCTTGAGAAGCAAGGCATCACTTTGCCCGAGAGGTTTACTGAAGAT
GAGTTACGCAGATTTTATGTCGCTGCAAATGGTGACTTTTCAAGTTTACTCTCATCGGTT
AAGAAGACAATTCGTTGGAGGGAAACATTTCACATACTTACATTGCAAGAACTTGATAAA
TGGTCTCACTTAGTCTTTTGGCATGGATTTGACACGATGCTTCGGCCTTGTTTAGTAATT
CGTCTCGGACTTGCATGCTCCAGCATACCACCTCGTGACAGACCCCGTTTCGGGCAAGCA
GTAGTTTCTCAAATTGACCATGGTGTTGTAAATTTGACCAATGAAGAAGATTCAAGAATT
ACCGTTTTGCTGGATTGCCATGGGATTTCTCCATTCAGATTTCCAATGCAAATGATGAGG
TCATTTATCACTGTAGTTCAAGAAAATTACCCGAATCGTCTTGGTGTATTGTTTGTTATC
CGCCTTCCTCCAGTTGTCAGAGTTATTGCACAGACATTTCTTCAAGTTTTGAAACCATCA
ACAAAGCAGAAGTTACGTTTCGAGGGAGATTCATACAAGAAGACATTGGCAGAGTTCTTG
CAGGTTGTGCCAGCGTTTCTGGGCGGTAAATGCAGCTGCCCACAATGTGAGAAGCCTCGT
AATAGTTCAGTGATACAGGCTGGGGAAGGGAGCAAGAGCCAGCCTCGCTTGGTCAGCGTT
GATGACGGATCGCCTGTCACAGACTTCGACTTCGATGAAGAAGAGATCCCATCAGCCTAT
AGCTGCGAGAACGCCATCAGGGCTGCAATAATTGGCCTGCTGATGATGTGCATCTTCGTT
GCGTTTCTGGCTGGGATGAACGATCCCACATCTGTTTCGCCCAGTGCCCAGTGAGAGCTA
TGGAATCGCCTACTCTCCTATAGACTATTAGATCTTAGATTGTCAGTTCCGAGTAATAGA
GTATATATATGTGTTGCTGCTAGGATGCTAGGGTGTTGTTTTCCTTGGCAACTTCTTCTC
GGTTGTCGTCAGACCGCCATGATAGTGCTGTGTCTCAATATGAGCGCAGATGAATAATAT
CCTGTGTGTGGCAAATGTTGGATCACAGTTCAGTTTGAGCCCGTCGATGTCTCTCTTAAC
GGGTTTTCTGTATTAGGGCAATGTGATTTCTCGTTAGTGTAAGTCAAAGTTGAATGGTTT
CAGCTCTTTATATAGATTATT