Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90612
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:2400643:2404529:1 gene:SORBI_3001G031600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGCAGAAGAGGCAGCCGGACGAGAGCGACGGGCCCCGGCGCGCCGGCGGCGGAGGA
GGCGAGCCCGGTGGGAGCTCATCATCATCCTCCTTGCCCCAGCGCCCCGGCGAGCCGAAG
CGGCAGAGGATCGCCCTTCGCGATGTGATCACGGAGGTGATGCGGAACACCAACATCGAG
AAGTTTTTAATTGCTCTCGAGCCCCTCATCAGGAGAGTGGTAAAAGAAGAAATTGAGTCG
GCTTTTGCAAATCATGCCTCTATGATGGCAAGAAACGTCACAGACACTGTTCCATGTGCG
TCAAAGAATTTGCAGCTGCAGTTCATGACTAGACTTGCTCTTCCAATATTTACTGGATCC
AAGATTGAAGGAGAGGGCTCCTTAAGTATAACTATTGCTCTAGTTGATGCTTTGACAAGA
CAAATTGTAGCACCAGGCAAGGAGTTCCAGATAAAGGTCGAGATTGTAGTTCTGGAGGGG
GATTTTGAAAGTGGAGAAGATGATGACTGGACAGCTCAGGAATTTAACAATAACATTGTC
AAAGAAAGAGAAGGCAAAAGGCCCTTGATTTCTGGGGATGTATTCATTGCCCTCATTGAT
GGCATTGGGACAGTAGGGGAACTTTCGTTCACAGATAACTCCAGCTGGACACGGAGCCGA
AAGTTCAGGCTAGGTGCAAGAACTGAGGATGGTTCTTTCAATGGTGTAAGAGTACGGGAA
GCAAAAACTGAATCATTTGTGGTTAAGGATCATCGAGGAGAATTGTACAAGAAGCACCAC
CCACCATTTCTTGAAGATGAAGTCTGGCGCCTGGAGAAAATTGGCAAGGAAGGTGCTTTT
CACAAGCGTTTGAACAGGGAGAGCATTTGCACTGTCAAAGATTTTCTCACATTATTAAAT
CTTGATGCTTCTAGACTTCGAAAGATATTAGGTGGTGGCATGTCAACAAAGATGTGGGAG
GCCACTGTGGAACATGCAAAAACATGTGTTCTAACTGACAAAGTGCATCACTACTATCCT
GACAGTTTAAACAAAGTTGGTGTTGTATTCAATGTAGTTGGAGAAGTAAGAGGGTTAATA
TCTGATAAATATGTTGCTGTTGATGACCTTACTGAAAAGGAGAAGGCCGAAGCACGTGCA
GCAGTGAAGCAAGCATATGAACACTGGAAGGATGTATTTACATGTGACAATGAAACGCTT
GTGGCAAACCCTTCAGATCCATTCAATATGAGATCTCCATCGTGGCGTGAAAATCAATAT
AACCACTTTCCCACACAAGTTTCTACTGATGGTTTTAGTTTGAGCCATTCGACCGTACCA
TCACCCAACATTTTCTCAATGGAGCCATCCGATGCTTTAGACCCTTGTGTACTGGAGACT
GAAGAAAGCAATGCTAATCAATTTCAGCCAGTGTTGCCCTCAGATGGGGGCCATGAAGTG
CCTCAAGGATCTCAGACGCTGGATAAGTTCTCCAACTCTTTGGTATACGATGACTGCAGC
ACCCATCCCTCATTCAGTGAGAGCTATTACAGCAGTGTAGATCCCAGCATATCCTTCGAC
ACACAAGATCTTGGAGCTGCACTGAAAGGCTTCATTGCTACCATCTCAAAGCCTAAGGCG
GCATATAGAGGATGGAGAACATTGTCTTATGTTCTAGGATGGATTTTCTATACCAAGAGA
ATCGTTGCAAAGAGAAAGAAACATGGGAAATAA

Peptide Sequence

PEP ID

EER90612
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:2400643:2404529:1 gene:SORBI_3001G031600 transcript:EER90612 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSQKRQPDESDGPRRAGGGGGEPGGSSSSSSLPQRPGEPKRQRIALRDVITEVMRNTNIE
KFLIALEPLIRRVVKEEIESAFANHASMMARNVTDTVPCASKNLQLQFMTRLALPIFTGS
KIEGEGSLSITIALVDALTRQIVAPGKEFQIKVEIVVLEGDFESGEDDDWTAQEFNNNIV
KEREGKRPLISGDVFIALIDGIGTVGELSFTDNSSWTRSRKFRLGARTEDGSFNGVRVRE
AKTESFVVKDHRGELYKKHHPPFLEDEVWRLEKIGKEGAFHKRLNRESICTVKDFLTLLN
LDASRLRKILGGGMSTKMWEATVEHAKTCVLTDKVHHYYPDSLNKVGVVFNVVGEVRGLI
SDKYVAVDDLTEKEKAEARAAVKQAYEHWKDVFTCDNETLVANPSDPFNMRSPSWRENQY
NHFPTQVSTDGFSLSHSTVPSPNIFSMEPSDALDPCVLETEESNANQFQPVLPSDGGHEV
PQGSQTLDKFSNSLVYDDCSTHPSFSESYYSSVDPSISFDTQDLGAALKGFIATISKPKA
AYRGWRTLSYVLGWIFYTKRIVAKRKKHGK

Transcript Sequence

Transcript ID

EER90612
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:2400643:2404529:1 gene:SORBI_3001G031600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACATGTCCATGGAAGCGAACGCGTGGTGCGCCTCTTGTACGGCGCGGAGGTAGGTCAA
GCGGAGCCGCGGTTGCGACGCGGTGTGGTGTGGGCGAGCCGAACCAAGCGGCGATCGATC
GAAGCGAGGCGTGGCGGCCGGAGATGTCGCAGAAGAGGCAGCCGGACGAGAGCGACGGGC
CCCGGCGCGCCGGCGGCGGAGGAGGCGAGCCCGGTGGGAGCTCATCATCATCCTCCTTGC
CCCAGCGCCCCGGCGAGCCGAAGCGGCAGAGGATCGCCCTTCGCGATGTGATCACGGAGG
TGATGCGGAACACCAACATCGAGAAGTTTTTAATTGCTCTCGAGCCCCTCATCAGGAGAG
TGGTAAAAGAAGAAATTGAGTCGGCTTTTGCAAATCATGCCTCTATGATGGCAAGAAACG
TCACAGACACTGTTCCATGTGCGTCAAAGAATTTGCAGCTGCAGTTCATGACTAGACTTG
CTCTTCCAATATTTACTGGATCCAAGATTGAAGGAGAGGGCTCCTTAAGTATAACTATTG
CTCTAGTTGATGCTTTGACAAGACAAATTGTAGCACCAGGCAAGGAGTTCCAGATAAAGG
TCGAGATTGTAGTTCTGGAGGGGGATTTTGAAAGTGGAGAAGATGATGACTGGACAGCTC
AGGAATTTAACAATAACATTGTCAAAGAAAGAGAAGGCAAAAGGCCCTTGATTTCTGGGG
ATGTATTCATTGCCCTCATTGATGGCATTGGGACAGTAGGGGAACTTTCGTTCACAGATA
ACTCCAGCTGGACACGGAGCCGAAAGTTCAGGCTAGGTGCAAGAACTGAGGATGGTTCTT
TCAATGGTGTAAGAGTACGGGAAGCAAAAACTGAATCATTTGTGGTTAAGGATCATCGAG
GAGAATTGTACAAGAAGCACCACCCACCATTTCTTGAAGATGAAGTCTGGCGCCTGGAGA
AAATTGGCAAGGAAGGTGCTTTTCACAAGCGTTTGAACAGGGAGAGCATTTGCACTGTCA
AAGATTTTCTCACATTATTAAATCTTGATGCTTCTAGACTTCGAAAGATATTAGGTGGTG
GCATGTCAACAAAGATGTGGGAGGCCACTGTGGAACATGCAAAAACATGTGTTCTAACTG
ACAAAGTGCATCACTACTATCCTGACAGTTTAAACAAAGTTGGTGTTGTATTCAATGTAG
TTGGAGAAGTAAGAGGGTTAATATCTGATAAATATGTTGCTGTTGATGACCTTACTGAAA
AGGAGAAGGCCGAAGCACGTGCAGCAGTGAAGCAAGCATATGAACACTGGAAGGATGTAT
TTACATGTGACAATGAAACGCTTGTGGCAAACCCTTCAGATCCATTCAATATGAGATCTC
CATCGTGGCGTGAAAATCAATATAACCACTTTCCCACACAAGTTTCTACTGATGGTTTTA
GTTTGAGCCATTCGACCGTACCATCACCCAACATTTTCTCAATGGAGCCATCCGATGCTT
TAGACCCTTGTGTACTGGAGACTGAAGAAAGCAATGCTAATCAATTTCAGCCAGTGTTGC
CCTCAGATGGGGGCCATGAAGTGCCTCAAGGATCTCAGACGCTGGATAAGTTCTCCAACT
CTTTGGTATACGATGACTGCAGCACCCATCCCTCATTCAGTGAGAGCTATTACAGCAGTG
TAGATCCCAGCATATCCTTCGACACACAAGATCTTGGAGCTGCACTGAAAGGCTTCATTG
CTACCATCTCAAAGCCTAAGGCGGCATATAGAGGATGGAGAACATTGTCTTATGTTCTAG
GATGGATTTTCTATACCAAGAGAATCGTTGCAAAGAGAAAGAAACATGGGAAATAAGTGT
ACACATGTATGTGTAGTTAAATTGCAAAATAAGTGGAGAGATCATGTACATTAGTTTGTT
TCTTGTCACAGCTGGTAAGCTCTGCTGGTTTCTTCAGCTGTACATGAGAGCATTTTATCA
GCTAGGGTTCCCTATGCGGCTGTAAATAATCAGATGAAGTTTTGTACAGGGTGAGGGATG
CGCAAGCATTTGTGATGTTTTGGCTGGCTGGCCGAGCTTGCTTTTTTATGCGGGCCGTGT
ATTACCTATATAGTAGTATTCAGTATGCTGCTTGATTTTGCAGTATTTTGGACATTTTGA
ACCTACATGTCACTTTTTAACAAGTTTATGTAGACGGTAATGTGTATATGGACCTGGATG
ACACTTGATAAAAAGCTGGACAGCATGTGCATGACAAATTGGACTAAATTTACAATA