Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90543
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:1518766:1525254:1 gene:SORBI_3001G018000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCTCGGCATTGGCCTTCCGCGCGCTGCGGCCTCCACACGGCCGCCACGCTGCC
GCCCCTTCGCCGCGCCCGCGCCCGCGTGCGTGCTCGGCAACCGCCGCTGCTCCAAGGGCG
CGCTGCCGCGCGGTGGCTGCGGACGAGCGCCCCGCCGACCCCGCGTTCCCCGAGGGCCAG
AACCGCGGGATTTCCGGGGCGGTGGAGAGGCCGGAGGCGGACGTCGTTGTTATAGGCAGC
GGGCTCGGCGGTCTGTGCTGCGCCGGCCTCCTGGCGAGGTACGGCCAGGACGTGCTGGTG
CTCGAGAGCCATGACCGCCCGGGAGGCGCCGCGCACTCGTTCGATATCAAGGGATTCAGC
TTCGATTCAGGGCCATCCTTGTTCTCTGGGTTCCAGTCCAGAGGCCCCCAGGCAAATCCA
CTTGCTCAGGTCCTTGATGCGTTAGGCCAATCAGTCCCTTGCGCGTCTTATGACTCTTGG
ATGGTTTATGTACCTGAAGGACAATTCCTCTCACGGATAGGACCAACTGAATTCCTCAAG
GACCTTGAGATGTTTGTTGGTGTTGATGCTGTCCAGGAGTGGAAAAAACTTCTTGATGCA
GTTATTCCTATGTCTGCAGCTGCAATGGCTTTGCCTCCACTTTCCATTCGAGGCGATCTG
GGCATTCTATCTACAGCTGCTGGTAGATATGCTCCTTCGTTATTGAAATCATTCATACAA
ATGGGACCTCAAGGAGCTCTGGGCGCTACAAAACTGCTACGTCCATTCAAAGAAATTGTT
GATTCGCTGGGGCTGAAAAATCCCTTTGTTCGTAACTGGATCGATCTCCTGTGCTTTCTA
CTTGCTGGAGTTAAATCTGATGGTGCTCTTTCTGCAGAAATGGTTTATATGTTTGCAGAA
TGGTACAAACCAGGATGCTTGCTTGAGTATCCTCTGGGTGGAACTGGAGCGATCATAGAT
GCCCTCGTGAGTGGTATTGAAAAATTTGGTGGCAGACTTGCTCTTCGTTCTCATGTTGAA
AAGATCTTAATCGAGAATGGTCGAGCAGTTGGTGTCAAGCTACAAAGTGGACAAGTTGTC
CGTGCAAAGAAAGCGGTTGTTAGCAATGCATCTATGTGGGATACTTTGGATCTCCTACCA
CCAAATGTTGTCCCAAAATCATATGAAGATAGAGTGAAAGCAACTCCACAATGTGAATCG
TTTATGCATCTCCACCTTGGTTTTGATGCAAAGAATGCTAGAGAGGACCTTGGGATCCAT
CACATTGTGGTTGACGATTGGAGCAAAGGAGTTGATGGTGAACAAAATGTTGTGTTGATA
TCTGTTCCTAGTGTTCTTAGTAAGGACCTGGCACCACCAGGAAAACACATTCTTCATGCA
TATACTCCAGGGACGGAACCTTTCAGTTTGTGGGAGGGATTGGACAGGAAAAGTGCAGAA
TATCGAAGATTGAAGGAAGAACGTTCTGAGGTGATGTGGAAAGCTGTGGAGCTTGCTCTT
GGCCCAAAATTTAGCCGTGAAAGATGCGACGTGAAATTGGTCGGGACACCACTAACGCAC
AAGAGATTTCTCAGAAGGAATAGGGGAACCTATGGTCCAGCCATAAAAGCTGGAGAAGCC
ACTTTCCCTGGGCAAGCAACACCAATCCCCCAGCTCTTCTGCTGCGGTGACTCGACTTTT
CCAGGGATTGGAGTGCCGGCGGTCGCGGCCAGCGGTGCAATCGTCGCGAACACGCTGGTT
CCGGTGTCGCAGCATTCAGAGCTTCTTGATGCTGTTGGAATTTGA

Peptide Sequence

PEP ID

EER90543
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:1518766:1525254:1 gene:SORBI_3001G018000 transcript:EER90543 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASALAFRALRPPHGRHAAAPSPRPRPRACSATAAAPRARCRAVAADERPADPAFPEGQ
NRGISGAVERPEADVVVIGSGLGGLCCAGLLARYGQDVLVLESHDRPGGAAHSFDIKGFS
FDSGPSLFSGFQSRGPQANPLAQVLDALGQSVPCASYDSWMVYVPEGQFLSRIGPTEFLK
DLEMFVGVDAVQEWKKLLDAVIPMSAAAMALPPLSIRGDLGILSTAAGRYAPSLLKSFIQ
MGPQGALGATKLLRPFKEIVDSLGLKNPFVRNWIDLLCFLLAGVKSDGALSAEMVYMFAE
WYKPGCLLEYPLGGTGAIIDALVSGIEKFGGRLALRSHVEKILIENGRAVGVKLQSGQVV
RAKKAVVSNASMWDTLDLLPPNVVPKSYEDRVKATPQCESFMHLHLGFDAKNAREDLGIH
HIVVDDWSKGVDGEQNVVLISVPSVLSKDLAPPGKHILHAYTPGTEPFSLWEGLDRKSAE
YRRLKEERSEVMWKAVELALGPKFSRERCDVKLVGTPLTHKRFLRRNRGTYGPAIKAGEA
TFPGQATPIPQLFCCGDSTFPGIGVPAVAASGAIVANTLVPVSQHSELLDAVGI

Transcript Sequence

Transcript ID

EER90543
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:1518766:1525254:1 gene:SORBI_3001G018000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCTGCCCCTGCCGCAGACCGCTCGGCCGCTGGCCGCTGCCGGCCCGCAGGTGCGCGACGC
GGCCAAGCCGAGCGGAGAGCTGCCTGTCCGCCGCCGCCTCTAACGGACCTAGGCTCTGCA
GCAAGCTTCCACGGAGCTCGCCTCGACGGCGACGGCGACGGCGAGACGAGCCCAGTATAA
ATATTTAATGGGCCGGATCGACACTTTGGGCTGACTTTCTGAGCATATGGGCCTACAGCC
CAGGTTCTCTGGGCCCATGTGGCTTTGATCCATGGTGCAGTGGCATCCGCTCCGTCCTGG
TCCTGGACGAGGCAACGGCCGCCGCGAAAGGAGAATGGCCGGTGAGGTGCCACGTGTCCC
CAGCCGCGGCCTCACTCGCACTACTCCCTCTCGCCTTCCCTGCTCGTCGTCTCCCACCAG
TTGCCTTCGACTCGCCGGACGCCGTTGCCCTCCGCTTCTGCGACTCCGTCCGAGATGGCC
GCCTCGGCATTGGCCTTCCGCGCGCTGCGGCCTCCACACGGCCGCCACGCTGCCGCCCCT
TCGCCGCGCCCGCGCCCGCGTGCGTGCTCGGCAACCGCCGCTGCTCCAAGGGCGCGCTGC
CGCGCGGTGGCTGCGGACGAGCGCCCCGCCGACCCCGCGTTCCCCGAGGGCCAGAACCGC
GGGATTTCCGGGGCGGTGGAGAGGCCGGAGGCGGACGTCGTTGTTATAGGCAGCGGGCTC
GGCGGTCTGTGCTGCGCCGGCCTCCTGGCGAGGTACGGCCAGGACGTGCTGGTGCTCGAG
AGCCATGACCGCCCGGGAGGCGCCGCGCACTCGTTCGATATCAAGGGATTCAGCTTCGAT
TCAGGGCCATCCTTGTTCTCTGGGTTCCAGTCCAGAGGCCCCCAGGCAAATCCACTTGCT
CAGGTCCTTGATGCGTTAGGCCAATCAGTCCCTTGCGCGTCTTATGACTCTTGGATGGTT
TATGTACCTGAAGGACAATTCCTCTCACGGATAGGACCAACTGAATTCCTCAAGGACCTT
GAGATGTTTGTTGGTGTTGATGCTGTCCAGGAGTGGAAAAAACTTCTTGATGCAGTTATT
CCTATGTCTGCAGCTGCAATGGCTTTGCCTCCACTTTCCATTCGAGGCGATCTGGGCATT
CTATCTACAGCTGCTGGTAGATATGCTCCTTCGTTATTGAAATCATTCATACAAATGGGA
CCTCAAGGAGCTCTGGGCGCTACAAAACTGCTACGTCCATTCAAAGAAATTGTTGATTCG
CTGGGGCTGAAAAATCCCTTTGTTCGTAACTGGATCGATCTCCTGTGCTTTCTACTTGCT
GGAGTTAAATCTGATGGTGCTCTTTCTGCAGAAATGGTTTATATGTTTGCAGAATGGTAC
AAACCAGGATGCTTGCTTGAGTATCCTCTGGGTGGAACTGGAGCGATCATAGATGCCCTC
GTGAGTGGTATTGAAAAATTTGGTGGCAGACTTGCTCTTCGTTCTCATGTTGAAAAGATC
TTAATCGAGAATGGTCGAGCAGTTGGTGTCAAGCTACAAAGTGGACAAGTTGTCCGTGCA
AAGAAAGCGGTTGTTAGCAATGCATCTATGTGGGATACTTTGGATCTCCTACCACCAAAT
GTTGTCCCAAAATCATATGAAGATAGAGTGAAAGCAACTCCACAATGTGAATCGTTTATG
CATCTCCACCTTGGTTTTGATGCAAAGAATGCTAGAGAGGACCTTGGGATCCATCACATT
GTGGTTGACGATTGGAGCAAAGGAGTTGATGGTGAACAAAATGTTGTGTTGATATCTGTT
CCTAGTGTTCTTAGTAAGGACCTGGCACCACCAGGAAAACACATTCTTCATGCATATACT
CCAGGGACGGAACCTTTCAGTTTGTGGGAGGGATTGGACAGGAAAAGTGCAGAATATCGA
AGATTGAAGGAAGAACGTTCTGAGGTGATGTGGAAAGCTGTGGAGCTTGCTCTTGGCCCA
AAATTTAGCCGTGAAAGATGCGACGTGAAATTGGTCGGGACACCACTAACGCACAAGAGA
TTTCTCAGAAGGAATAGGGGAACCTATGGTCCAGCCATAAAAGCTGGAGAAGCCACTTTC
CCTGGGCAAGCAACACCAATCCCCCAGCTCTTCTGCTGCGGTGACTCGACTTTTCCAGGG
ATTGGAGTGCCGGCGGTCGCGGCCAGCGGTGCAATCGTCGCGAACACGCTGGTTCCGGTG
TCGCAGCATTCAGAGCTTCTTGATGCTGTTGGAATTTGAGTGGCAGATATGTCCTGGTAA
GTTAGATCGAATCACTACTGATAACGCCACTGCAGTCTAGAGATATCATTCTAAACTTAG
CTAATGGCCACTGAAACTGCATCAAGTACTTTATGTTGGAGCTTTTCACCGACAAAATGT
ATCGACCATCAAGGTTAAATTTTTTATCGCCCTCACATGCTGAGTCCAGCTAGGAGCCCC
TTAGAATAATGATGTTTCTACTTGTCACGGCACAGCTCATATGAGCACTTTACAGTAGCA
TATGCGAACTGAATTGTTGATGTGAGGCCCATTTGACTCGGTCAATGAATGACAGTAGCA
TGATGAGCATGAACAGAACACCTATCCCCGGTGGACCTTTTGAGTGCCGCCCTTTTTTTT
GTTAGATCATCTCCAACATATTACTTGTCCTCTATCTCCTGTTGTTAGGATGAGTAATCT
ACTGGGGCAACTTTAATCCCTCGTATAACAGTTTTTTGGTATTGGGGATGGCATAAGTAA
TGTTGGAGATACCACCACTTGTTTCCTGTTGCTATTCTTTTGGGCAAAGGCATGCGACTG
TCTGTCTGTCTGTCTCTGTTTTGTGCCTCTCTCTTGCTTACCGTAGATCGCTTCATCGAG
CTTCTCTGGTTGCAGGCTGATAAGTAGATACGTCTACATACACACAAACTCACAAAGATA
ATCAAAGATTTTCCTACGGCTGTTGGAAAGACCGCAAGAACATGGATGATGAAGACGACT
GTTACAGCATAAAGTAATTGTCATTTAACCATGGTTCATTGTGTGCAGAGCAGCGTTTTG
TAGTCAGAACTGAGACTGGGAAAATCAAAATATGGCATGATGTTGTACAGTACTGATTCA
GATATACTTTTTTTTAAAACTCGATTCAGATAATACTTACTACGGCATGAAGCTTGTGTT
ACTGTGCCCCACATTGTTAAGAGAAGAGAGATGCTGCTTTCTGACAAAGTGGTCGCCTGC
ATGCTCCTTGACTCCTTGTATTGTTCTACCGAAAGCTCTGTGGCACATGCAGGCTTTTTG
TCGACATTTTTCTG