Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90542
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:1503221:1511448:1 gene:SORBI_3001G017700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAAGCCGACATCGCTTCGAGGTATGAGATCCCTCGGACCGCTCAGTTCCTTCGCGAC
TGCGCCTACAACAGGGTCGCGCTCCAGTTCCCCGACGAGATGCTCAAGGACGCCGCGGCG
GTGGCGAGGGCGCTGCGGCGGGAGCTTGCCTCCGGCGGGGCCGGTGGTGGGGTCAGGGTG
TTCGTGATGGCCGACACGGCGTACAACTCCTGCTGCGTCGACGAGGTGGGCGCGTCCCAC
ATCGATGCGCAGTGCGTCGTCCATTACGGCCACGCCTGCATGAGCCCAACATCAAATTTG
CCAGCTTACTTTGTATTCGGGAAGGCACAGTTGGATATCCACGCATGTGCCAGCACATTG
CTTGAGTGCTCAAGAACAAGCAATAAGCGCATTCTGGTTTTATATGGACTAGAGTACGCA
TATGCATTGGATGATCTTAGACAAGCTTTCATGGAGTCATGCAAATCAAATTCTTGCAAT
CCTGAAGTCCAGTATGCAGAAGTTCTGTGTTCAGTTATGAGTCCATCATCAAGTACTACA
GAAGAAAACACAATTCCTCAGTCGAGTGGCACCTCTTGTAACAGAGATATCACAAGAAAC
AGCGATGTAGCAACATTCCTGGACAATCATTATGGCATGAAATGTTCCAGTTCTACACAA
AAGTACAGCCTTGGTGGCATTACATGGGATATTTCAGTTGATGAAAAAATGGAGGACTAT
TTGATATTTTGGATTGGACAAGATAACTCAGCATTTGCCAACATAGTCCTTACCTTCAAT
AAATGTGAAATAGTTAGATATGACGCAATAGAAAATCAACTCACAGCTGACATCTCTCAT
CTGATGAAAATTCTTAGGCGAAGATATTACCTTGTGGAGAAGGCGAAGGATGCAAATATT
ATTGGCATTTTGGTGGGAACTCTGGGTGCTGCTGGTTATCTTCATATAATCGAACAAATG
AAAGAACTGATCAAGGCTGCTGGAAAGAAATCTTATACATTGGTCATGGGCAGGCCTAAT
TCTGCAAAACTTGCGAATTTTCCAGAGTGCGAAGTTTTTATTTATGTTTCTTGTGCCCAA
ACCGCTCTGCTGGATAGCAAGGATTTTTTAGCTCCAGTTATTACACCTTTTGAAGCTGTA
CTAGCTTTTAGCAGGGGAAGAGAGTGGACTGGAGAATATCTTTTGGATTTCAAGGATTTG
ATCACTTTAGAGAAACAAGAAGTTGTGAGCACAACAGAAGAAGCACGTTTTTCTTTTATC
AAAGGTGTCTATGTGGAAGATAATTGCCCCCAAGAAAATGAGGAGCAATCAGAAACATCG
CTCGCACTGGCTGAGGTAACAGAAAAGGCACTAAGCATCCAAAACCAGCACAACGACGCT
GTCCTTTACAAAGGAGGAGCAATGTCCTCAATCGACTACCTCAAGGCACGTTCATACCGT
GGTCTAACTGGAGAATATGAAGGTCCAGTGCCTAATTCAATCTTGGTAGGCAGAACCGGC
AGGGCGGCTGGTTACAGTGATGAGAAAACCGAGAACGCACAATAA

Peptide Sequence

PEP ID

EER90542
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:1503221:1511448:1 gene:SORBI_3001G017700 transcript:EER90542 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEADIASRYEIPRTAQFLRDCAYNRVALQFPDEMLKDAAAVARALRRELASGGAGGGVRV
FVMADTAYNSCCVDEVGASHIDAQCVVHYGHACMSPTSNLPAYFVFGKAQLDIHACASTL
LECSRTSNKRILVLYGLEYAYALDDLRQAFMESCKSNSCNPEVQYAEVLCSVMSPSSSTT
EENTIPQSSGTSCNRDITRNSDVATFLDNHYGMKCSSSTQKYSLGGITWDISVDEKMEDY
LIFWIGQDNSAFANIVLTFNKCEIVRYDAIENQLTADISHLMKILRRRYYLVEKAKDANI
IGILVGTLGAAGYLHIIEQMKELIKAAGKKSYTLVMGRPNSAKLANFPECEVFIYVSCAQ
TALLDSKDFLAPVITPFEAVLAFSRGREWTGEYLLDFKDLITLEKQEVVSTTEEARFSFI
KGVYVEDNCPQENEEQSETSLALAEVTEKALSIQNQHNDAVLYKGGAMSSIDYLKARSYR
GLTGEYEGPVPNSILVGRTGRAAGYSDEKTENAQ

Transcript Sequence

Transcript ID

EER90542
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:1503221:1511448:1 gene:SORBI_3001G017700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCCATAAATGCGACTAAAGATTTAATATGACGAAAAATCTTGAAAATTTTTGCGAACTA
AAAAAGGCCAGGCCGAAATGATGAAGGTTGTTTGACTCAAGCTCCGGTCGATCTGGGCCG
CACTTTCACATCCAACGGCGCAAAAACACAGAACGCTGCTCAATTGCTGACGAGCACAGC
CGCGGCGGCGGCGCTCCCTCCCAAAACCCTCGGCCGCCAACCGTCTCGTTCCTCCGGCTG
CCCCACTTCTCCTCCGGCGGCGCCGCGGCGGGCAACCTCCCAAAATCACGGCCATGGAAG
CCGACATCGCTTCGAGGTATGAGATCCCTCGGACCGCTCAGTTCCTTCGCGACTGCGCCT
ACAACAGGGTCGCGCTCCAGTTCCCCGACGAGATGCTCAAGGACGCCGCGGCGGTGGCGA
GGGCGCTGCGGCGGGAGCTTGCCTCCGGCGGGGCCGGTGGTGGGGTCAGGGTGTTCGTGA
TGGCCGACACGGCGTACAACTCCTGCTGCGTCGACGAGGTGGGCGCGTCCCACATCGATG
CGCAGTGCGTCGTCCATTACGGCCACGCCTGCATGAGCCCAACATCAAATTTGCCAGCTT
ACTTTGTATTCGGGAAGGCACAGTTGGATATCCACGCATGTGCCAGCACATTGCTTGAGT
GCTCAAGAACAAGCAATAAGCGCATTCTGGTTTTATATGGACTAGAGTACGCATATGCAT
TGGATGATCTTAGACAAGCTTTCATGGAGTCATGCAAATCAAATTCTTGCAATCCTGAAG
TCCAGTATGCAGAAGTTCTGTGTTCAGTTATGAGTCCATCATCAAGTACTACAGAAGAAA
ACACAATTCCTCAGTCGAGTGGCACCTCTTGTAACAGAGATATCACAAGAAACAGCGATG
TAGCAACATTCCTGGACAATCATTATGGCATGAAATGTTCCAGTTCTACACAAAAGTACA
GCCTTGGTGGCATTACATGGGATATTTCAGTTGATGAAAAAATGGAGGACTATTTGATAT
TTTGGATTGGACAAGATAACTCAGCATTTGCCAACATAGTCCTTACCTTCAATAAATGTG
AAATAGTTAGATATGACGCAATAGAAAATCAACTCACAGCTGACATCTCTCATCTGATGA
AAATTCTTAGGCGAAGATATTACCTTGTGGAGAAGGCGAAGGATGCAAATATTATTGGCA
TTTTGGTGGGAACTCTGGGTGCTGCTGGTTATCTTCATATAATCGAACAAATGAAAGAAC
TGATCAAGGCTGCTGGAAAGAAATCTTATACATTGGTCATGGGCAGGCCTAATTCTGCAA
AACTTGCGAATTTTCCAGAGTGCGAAGTTTTTATTTATGTTTCTTGTGCCCAAACCGCTC
TGCTGGATAGCAAGGATTTTTTAGCTCCAGTTATTACACCTTTTGAAGCTGTACTAGCTT
TTAGCAGGGGAAGAGAGTGGACTGGAGAATATCTTTTGGATTTCAAGGATTTGATCACTT
TAGAGAAACAAGAAGTTGTGAGCACAACAGAAGAAGCACGTTTTTCTTTTATCAAAGGTG
TCTATGTGGAAGATAATTGCCCCCAAGAAAATGAGGAGCAATCAGAAACATCGCTCGCAC
TGGCTGAGGTAACAGAAAAGGCACTAAGCATCCAAAACCAGCACAACGACGCTGTCCTTT
ACAAAGGAGGAGCAATGTCCTCAATCGACTACCTCAAGGCACGTTCATACCGTGGTCTAA
CTGGAGAATATGAAGGTCCAGTGCCTAATTCAATCTTGGTAGGCAGAACCGGCAGGGCGG
CTGGTTACAGTGATGAGAAAACCGAGAACGCACAATAAATGTACCATCCTGCCAGTTAAC
CAGTTACTACAGGCTCCCTTGTTTTGGCGGTGAAAAACCAGGGTGCACAATGATTCAATC
TTACCCTGGATGGTTTACCAATCTTTGCCTTTTGTTTTGGAGGGGAAACAGGTTTACAAA
CAATTGTCGACATTTTTATCGACGAGAACACCTGTTTCTAGTCCCAGGGAACAATGCTTT
AGATGCTGTTCGTTCACGTGGCTGTTTTGCTGTTGGAAACTCTGTGCATAGTCGGTTTGG
ATGCGTCACAAGTTTTGCGAATTTGTGTGAGGTTATTTCTAACAACTGTGGCATGTGTTC
AGAAGATGAGATATACGTTGTACCAGACTTGTTCAAACAGTGACAGATGGATAGACCACT
GTAGTCCGTTATGTTTGTACCAGACAAAGTTTACTCTGTACATTCATATTTATTGACTAC
TACTAGGGAGCCCTTAAAGCACCATTTGGTAAAA