Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90506
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:940000:945188:1 gene:SORBI_3001G010700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGGCGACAGCACCAACCTCGACGCGGCGATAGAGTCGCTCCTCAATGTCGAGAAG
CAGATGAGGCTGGCCGGCGATGTCGCCGGCACGCGGAAGGCCGTCATCGACATCGTCGAG
CTCTGCTACAAGGCCGGCGCGTGGAAGACGCTCAACGACCAGATCGTTCTCCTCTCCAAG
AGGAGAGGCCAGCTTAAGCAGGCCATTACTGCCATGGTTCAAAAAGCAATGGACTACATT
GATTTGACACCAGACACTGACACACGCATCGAGCTAATCAAAACACTGAGCAGTGTCTCT
GCTGGCAAAATTTATGTTGAGATAGAGAGAGCAAGATTGATCAGAAGACTTGCTAAAATC
AAAGAGGAGCAGGGACAGATTGACGAGGCTGCCGATTTGATGCAAGAAGTTGCTGTCGAA
ACATTTGGCTCCATGGCCAAGACGGAAAAAATTGCTTTTATTCTTGAGCAGGTCCGGCTA
TGCCTGGATCGGCAAGATTATGTCAGAGCACAAATTTTATCAAGGAAAATTAGTACTAGA
GTATTTGAAGCAGATCCATCGAAGGAAAAAAAGAAACCAAAGGAAGGGGACAATATTGTT
CAGGATGCTCCTGCAGACATTCCATCCCTACTAGAATTGAAGCGCGTCTACTATGAACTC
ATGATTCGATATTACATGCACAACAATGATTACCTGGAAATCTGCCGCTGTTACAAGGCG
ATTTATGATATTCCAGCGATAAAAGAGGATCCAACAAAGTGGATACCGATTCTTCGGAAG
ATCTGTTGGTACTTGGTGCTAGCACCCCATGATCCTATGCAATCTAGCCTTCTCAATGCT
ACTCTCGAGGACAAAAACCTTTCGGAGATTCCCAATTTCAGGCTATTGCTGAAGCAGCTG
GTTACCATGGAGGTCATCCAGTGGACAACTTTGTGGGAGTTCGCCAAGCACGAATACGAG
AACGAGAAGAATCTTCTCGGAGGAGCTTTGGGTGCCAAAGCTGCAGAAGATTTGAAGCTG
AGGATTATCGAACATAATATCTTGGTCGTGTCCAAATACTATTCGAGGATTACCCTCAAG
AGGCTTGCAGATCTTCTTTGCCTGAGTTTGCAGGAGGCAGAGAAGCATCTTTCAGACATG
GTGAACTCAAAAGCTTTGATTGCGAAGATTGACAGGCCGATGGGAGTTGTCAGTTTCCAG
ACGACTAAAGATTGTAACGGTGTACTTAACTCATGGGCTACCAACCTCGAGAAGCTTCTC
GACCTGGTCGAGAAAAGCTGTCACCAGATTCACAAGGAAACCATGATCCATAAGGCGGTG
TTGAAAGCTTGA

Peptide Sequence

PEP ID

EER90506
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:940000:945188:1 gene:SORBI_3001G010700 transcript:EER90506 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEGDSTNLDAAIESLLNVEKQMRLAGDVAGTRKAVIDIVELCYKAGAWKTLNDQIVLLSK
RRGQLKQAITAMVQKAMDYIDLTPDTDTRIELIKTLSSVSAGKIYVEIERARLIRRLAKI
KEEQGQIDEAADLMQEVAVETFGSMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISTR
VFEADPSKEKKKPKEGDNIVQDAPADIPSLLELKRVYYELMIRYYMHNNDYLEICRCYKA
IYDIPAIKEDPTKWIPILRKICWYLVLAPHDPMQSSLLNATLEDKNLSEIPNFRLLLKQL
VTMEVIQWTTLWEFAKHEYENEKNLLGGALGAKAAEDLKLRIIEHNILVVSKYYSRITLK
RLADLLCLSLQEAEKHLSDMVNSKALIAKIDRPMGVVSFQTTKDCNGVLNSWATNLEKLL
DLVEKSCHQIHKETMIHKAVLKA

Transcript Sequence

Transcript ID

EER90506
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:940000:945188:1 gene:SORBI_3001G010700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCCAGTACAAACTCGGAGGGAAGAGAAGAGGCCTCGGTGGCTACCCTGCCTGCCTGCCCA
ACAAAGCCCTACCTGCCTGCCCAACCTTCTTCCCCCGCAAGCAAAGCGAAGCAGCCCAGC
AGATCTCCTCGCCGCCTACCGTCTCTTCCTCCACAGCTTCCCCGGATCCGGCCATGGAGG
GCGACAGCACCAACCTCGACGCGGCGATAGAGTCGCTCCTCAATGTCGAGAAGCAGATGA
GGCTGGCCGGCGATGTCGCCGGCACGCGGAAGGCCGTCATCGACATCGTCGAGCTCTGCT
ACAAGGCCGGCGCGTGGAAGACGCTCAACGACCAGATCGTTCTCCTCTCCAAGAGGAGAG
GCCAGCTTAAGCAGGCCATTACTGCCATGGTTCAAAAAGCAATGGACTACATTGATTTGA
CACCAGACACTGACACACGCATCGAGCTAATCAAAACACTGAGCAGTGTCTCTGCTGGCA
AAATTTATGTTGAGATAGAGAGAGCAAGATTGATCAGAAGACTTGCTAAAATCAAAGAGG
AGCAGGGACAGATTGACGAGGCTGCCGATTTGATGCAAGAAGTTGCTGTCGAAACATTTG
GCTCCATGGCCAAGACGGAAAAAATTGCTTTTATTCTTGAGCAGGTCCGGCTATGCCTGG
ATCGGCAAGATTATGTCAGAGCACAAATTTTATCAAGGAAAATTAGTACTAGAGTATTTG
AAGCAGATCCATCGAAGGAAAAAAAGAAACCAAAGGAAGGGGACAATATTGTTCAGGATG
CTCCTGCAGACATTCCATCCCTACTAGAATTGAAGCGCGTCTACTATGAACTCATGATTC
GATATTACATGCACAACAATGATTACCTGGAAATCTGCCGCTGTTACAAGGCGATTTATG
ATATTCCAGCGATAAAAGAGGATCCAACAAAGTGGATACCGATTCTTCGGAAGATCTGTT
GGTACTTGGTGCTAGCACCCCATGATCCTATGCAATCTAGCCTTCTCAATGCTACTCTCG
AGGACAAAAACCTTTCGGAGATTCCCAATTTCAGGCTATTGCTGAAGCAGCTGGTTACCA
TGGAGGTCATCCAGTGGACAACTTTGTGGGAGTTCGCCAAGCACGAATACGAGAACGAGA
AGAATCTTCTCGGAGGAGCTTTGGGTGCCAAAGCTGCAGAAGATTTGAAGCTGAGGATTA
TCGAACATAATATCTTGGTCGTGTCCAAATACTATTCGAGGATTACCCTCAAGAGGCTTG
CAGATCTTCTTTGCCTGAGTTTGCAGGAGGCAGAGAAGCATCTTTCAGACATGGTGAACT
CAAAAGCTTTGATTGCGAAGATTGACAGGCCGATGGGAGTTGTCAGTTTCCAGACGACTA
AAGATTGTAACGGTGTACTTAACTCATGGGCTACCAACCTCGAGAAGCTTCTCGACCTGG
TCGAGAAAAGCTGTCACCAGATTCACAAGGAAACCATGATCCATAAGGCGGTGTTGAAAG
CTTGAGTGTTTGTGTTTGCCCATTTTGGTTTAGGTCTCCCTGGTAGCCCTGCCGTGGTGT
TAAGATAGTGTAACGGCAGGACTCTGAATTGAGACTATTTCAGATTAACCGGTGGTGTCA
AGTGGAAGATCATTTAAGATGAACCAGTGTTCTGTCAAATGAATTACACATGGACAGGAT
AATAATTCTCTGTATCTCAAGAAACCAGTCGCCGTAGAGTAATTCTGGATTCGTGTCCTG
ATGGGAGATTTTGGTTGAATTCGTTGGTCCTTGGTGGCACTTGTTACGGGTCACACATTC
TATAACAAACTAACATTGTTTGTTT