Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90494
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:746917:749421:1 gene:SORBI_3001G007900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCCGGCGGCCGAAAGCGTCCGGCCCCGTTCGCCGGCTTCTCCCCCTTTGCTCGCTCC
CTCATCTTCTCCGCCAGCACCTCAAGCTGTCCAAAAGCGCTCCCCCTTCCCGACGCTTCC
ACCTCCGACGCCGACGCTGAAACCCCTCGCCAAGACAACATGCCGCGGCCGCCGTCCAAG
CGCGCGAAGCTGACCGAGCCCTCCAGCGACGAGGTGGAGGACCGCGGCAGCAGCGGAAGC
GAAGAGGAAAGCTTCAGCACCAGCGGCAGCGACGACGGCGAGGATTCGTCGGAGGAGCTT
GAGACGGTGCAAGCGGACTTCGCCTTCTTCGACCCCAAGCCGAGCGACTTTCATGGCGTC
AGGCTGCTGCTCAAGACGTACCTCGACTCCAAGCCCTGGGACCTCACCGGCTTCGTTGAC
CTTATCCTGGCACAGACGACAGTAGGCACGGTCGTCAAGTTGGCTGATGACGACGACGAG
GAAGGGGAAGGAAACGGTGCTGAGAAGGCCAATTCCAGTAACAACACTGACGATGATGAT
CTGTTTGGTCTCATTAGTGTGCTCAATTTGGGACGACACGCTGAGCAAAAATGCATTAAG
GACCTTAAGGAGTATCTGCTTGCTGTCTGTGCCGACAAGGGTACTAAGAAGCAGCTCAGG
TCTCTGCTCGAAGATAAAGCATCAAGTGTGGGCCTTCTGGTGTGTCGCCGCTTTGTGAAT
TTCCCTTATGAACTCGTGCCTAAGCTGTATGACGCACTCTTCGACGAGGTTTCCTGGGCA
ACAGAAGATGAGCCAACAAAAGAACTTCGGGACTCCTTCCGGTTCAAGCAGTACCTGTTG
GTTGTCAGAATGCTCGAGAGGAAAACCCCTGCAAAACATAAATCAAAGAAGAGCAAAGAT
GATGATGAACCTGTTATCTATCCAAAGTTAGAAGATGAAATTTTTCACAAGCTTAGCTCA
TGGTCTTTCACTTTTCCAATACGTTCTGAGCAGTCAGCTCAACAGGAGATGAAAGATTAC
AAAGAGATGGGCTTAGTGATGGCAATTAAAGCTGACGTAGTTCCAAAGTTCCGAAAGAAG
TTGGAAGATTTGGTGTCCGAGTAG

Peptide Sequence

PEP ID

EER90494
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:746917:749421:1 gene:SORBI_3001G007900 transcript:EER90494 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPGGRKRPAPFAGFSPFARSLIFSASTSSCPKALPLPDASTSDADAETPRQDNMPRPPSK
RAKLTEPSSDEVEDRGSSGSEEESFSTSGSDDGEDSSEELETVQADFAFFDPKPSDFHGV
RLLLKTYLDSKPWDLTGFVDLILAQTTVGTVVKLADDDDEEGEGNGAEKANSSNNTDDDD
LFGLISVLNLGRHAEQKCIKDLKEYLLAVCADKGTKKQLRSLLEDKASSVGLLVCRRFVN
FPYELVPKLYDALFDEVSWATEDEPTKELRDSFRFKQYLLVVRMLERKTPAKHKSKKSKD
DDEPVIYPKLEDEIFHKLSSWSFTFPIRSEQSAQQEMKDYKEMGLVMAIKADVVPKFRKK
LEDLVSE

Transcript Sequence

Transcript ID

EER90494
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:746917:749421:1 gene:SORBI_3001G007900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCCTCCTCCCCAGCCGCCGCCGCTCCGCCTGCCCGCGACACCTCCCCAGAGGAATGCCC
GGCGGCCGAAAGCGTCCGGCCCCGTTCGCCGGCTTCTCCCCCTTTGCTCGCTCCCTCATC
TTCTCCGCCAGCACCTCAAGCTGTCCAAAAGCGCTCCCCCTTCCCGACGCTTCCACCTCC
GACGCCGACGCTGAAACCCCTCGCCAAGACAACATGCCGCGGCCGCCGTCCAAGCGCGCG
AAGCTGACCGAGCCCTCCAGCGACGAGGTGGAGGACCGCGGCAGCAGCGGAAGCGAAGAG
GAAAGCTTCAGCACCAGCGGCAGCGACGACGGCGAGGATTCGTCGGAGGAGCTTGAGACG
GTGCAAGCGGACTTCGCCTTCTTCGACCCCAAGCCGAGCGACTTTCATGGCGTCAGGCTG
CTGCTCAAGACGTACCTCGACTCCAAGCCCTGGGACCTCACCGGCTTCGTTGACCTTATC
CTGGCACAGACGACAGTAGGCACGGTCGTCAAGTTGGCTGATGACGACGACGAGGAAGGG
GAAGGAAACGGTGCTGAGAAGGCCAATTCCAGTAACAACACTGACGATGATGATCTGTTT
GGTCTCATTAGTGTGCTCAATTTGGGACGACACGCTGAGCAAAAATGCATTAAGGACCTT
AAGGAGTATCTGCTTGCTGTCTGTGCCGACAAGGGTACTAAGAAGCAGCTCAGGTCTCTG
CTCGAAGATAAAGCATCAAGTGTGGGCCTTCTGGTGTGTCGCCGCTTTGTGAATTTCCCT
TATGAACTCGTGCCTAAGCTGTATGACGCACTCTTCGACGAGGTTTCCTGGGCAACAGAA
GATGAGCCAACAAAAGAACTTCGGGACTCCTTCCGGTTCAAGCAGTACCTGTTGGTTGTC
AGAATGCTCGAGAGGAAAACCCCTGCAAAACATAAATCAAAGAAGAGCAAAGATGATGAT
GAACCTGTTATCTATCCAAAGTTAGAAGATGAAATTTTTCACAAGCTTAGCTCATGGTCT
TTCACTTTTCCAATACGTTCTGAGCAGTCAGCTCAACAGGAGATGAAAGATTACAAAGAG
ATGGGCTTAGTGATGGCAATTAAAGCTGACGTAGTTCCAAAGTTCCGAAAGAAGTTGGAA
GATTTGGTGTCCGAGTAGTCCTTTGCGTAACTGACCAATGTGGAATTTTGCTGCTGTCCA
CATGGTTTGAATTGATGTCAGGAACGACTGTGATTCTGACTGTGAAGCACGAATGGTGGT
ACTGTTTTTTGGTGTTGATTTGCAACAAGGATTCATCCATGAACTAATCAAATGAAGAGA
TTTTGAGTTGTTATCCTAGTACATGTTTTATTGATAAGCAACATTGTTTAGCTCATGTGG
ATTGTGAGACACTATGCACAACACCAGGTTGGGATTTCCGTTTGATACATATGTATCTTT
TT