Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90466
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:278106:282181:1 gene:SORBI_3001G003100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCACCATCCCCACCACAGATTCCGGCCTCCTCCTCGGTTCCTCCGCTCTCCTCCGG
AGGACTAGGAGGGCCGCCTCGTCCGCCAGGCTTCCCGCCGCCGCCCGCCGTCGCCCGCAG
CTCCTCGTGCGCGCCTCCGCCAAGGAGATCGCCTTCGACCAGGGCTCCAGAGCCTCCCTT
CAGGCCGGCGTCGAGAAGCTCGCCGCCGCGGTCGGCGTCACCCTCGGACCCAGAGGAAGG
AATGTTGTCCTGGATGAGTTTGGAACCCCCAAAGTGGTCAATGATGGAGTTACCATTGCT
CGTGCTATTGAGCTCGCAGATCCCATGGAGAATGCTGGTGCTGCATTGATTCGTGAAGTT
GCTAGCAAGACGAATGACTCGGCTGGTGACGGAACCACTACCGCCTCTGTTCTCGCTAGG
GAAATCATAAAATTGGGTATGTTGAGCATTACTTCAGGGGCAAATCCAGTGTCAGTTAAG
AAGGGCATTGATAAGACTGTTCAGAAATTGGTGGAGGAACTTGAGAAGAAGTCCAGGCCT
GTCAAGGGTAGCGGGGATATTAAAGCTGTTGCTGCCATATCAGCTGGAAATGATGAATTT
GTTGGGACTATGATTGCTGAAGCTATTGACAAGGTTGGCCCTGATGGTGTCCTCTCAATC
GAGTCATCATCATCATTTGAGACGACAGTTGAAGTTGAAGAAGGGATGGAGCTTGACAGA
GGATATATCTCCCCTCAGTTTGTCACCAATCCTGAAAAATCTACTGTTGAGTTTGAAAAT
GCTCGGATTCTTGTCACTGATCAGAAGATATCATCGATAAAAGAAATCATTCCTCTGTTG
GAGCAGACAACACAGTTAAGAGCACCACTTCTTATAATTGCAGAGGATGTAAGTGGCGAG
GCGCTGGCAACATTAGTTGTAAACAAGCTTAGAGGAATTCTAAATGTGGCTGCAATCAAA
GCTCCTGGCTTTGGTGAGAGGCGTAAAGCTCTTCTTCAGGACATTGCCATTGTTACAGGT
GCTGAATATCAATCCAAAGATCTTGGTCTACTAGTTGAGAATACAACAGTAGAGCAGCTT
GGCATAGCTCGGAAAGTTACAATCTCAAGTTCCTCGACTACCATTATAGCAGATGCTGCT
AGCAAAGATGATATCCAGGCCAGAATTGCTCAGCTGAAGAGAGAGCTTTCTCAGACGGAC
TCGGCTTATGACTCTGAGAAGTTGGCAGAGAGAATTGCAAAGCTTTCTGGTGGAGTTGCT
GTGATCAAGGTTGGAGCCTCAACCGAGGCGGAGCTTGAGGACCGCAAGCTCCGCATAGAG
GACGCAAAGAATGCAACTTTTGCAGCTATAGAGGAAGGTATTGTTCCAGGAGGTGGTGCA
GCCTATGTTCATCTCTCAACATTTGTACCGGCTATCAAGGAGACGTTGGATGATCCTGAA
GAGCGGCTTGGTGCCGATATCATTCAGAAGGCTTTGGTGGCACCTGCAGCGTTGATAGCA
CATAATGCTGGGGTGGAAGGTGAGGTGATTGTGGATAAAATCAGGGAAAGCGAATGGGAG
TTTGGTTATAACGCCATGGCGGACAAGCACGAGAACCTGGTGGAGGCTGGTGTGATCGAC
CCTGCGAAAGTGACAAGGTGTGCCCTGCAGAACGCCGCCTCGGTGGCTGGAATGGTGCTG
ACTACCCAGGCAATCGTTGTGGAGAAGCCCCAGAAGGCTCCTGCAGCTGCAGCGGCACCC
TAG

Peptide Sequence

PEP ID

EER90466
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:278106:282181:1 gene:SORBI_3001G003100 transcript:EER90466 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATIPTTDSGLLLGSSALLRRTRRAASSARLPAAARRRPQLLVRASAKEIAFDQGSRASL
QAGVEKLAAAVGVTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELADPMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKLGMLSITSGANPVSVKKGIDKTVQKLVEELEKKSRP
VKGSGDIKAVAAISAGNDEFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMELDR
GYISPQFVTNPEKSTVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVSGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQSKDLGLLVENTTVEQL
GIARKVTISSSSTTIIADAASKDDIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVA
VIKVGASTEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTFVPAIKETLDDPE
ERLGADIIQKALVAPAALIAHNAGVEGEVIVDKIRESEWEFGYNAMADKHENLVEAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVEKPQKAPAAAAAP

Transcript Sequence

Transcript ID

EER90466
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:278106:282181:1 gene:SORBI_3001G003100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTAATAATATCATCCATCTTCTGTTTTTCCCCTATTAATAGGAGCCCAGATTCATATTT
TTTATCCAAAATTGTCAACGATCTTCCACCCAGATTGAAAGGGATGCCTCGTTGGAATGT
TCTAGAAAGAAGGCCGGCCCCTCGAGAAGCCTCCGGGTCGTTCCCCTGCCTCTGCCTACT
ACTAGTAGTGGAGGGGCATGGTCTCACGCTACTCGCTAACTACTCGCCGCAGCCAGGCAG
ACGAGACAGACAGATCCCCTTCCCCTGCCGCCGCCGCCGACCCCCAAATCAAAACCCTAG
CTAGACCCCAAGACACGCAGAAGCAGAAGCAGAAGCAGGCATGGCCACCATCCCCACCAC
AGATTCCGGCCTCCTCCTCGGTTCCTCCGCTCTCCTCCGGAGGACTAGGAGGGCCGCCTC
GTCCGCCAGGCTTCCCGCCGCCGCCCGCCGTCGCCCGCAGCTCCTCGTGCGCGCCTCCGC
CAAGGAGATCGCCTTCGACCAGGGCTCCAGAGCCTCCCTTCAGGCCGGCGTCGAGAAGCT
CGCCGCCGCGGTCGGCGTCACCCTCGGACCCAGAGGAAGGAATGTTGTCCTGGATGAGTT
TGGAACCCCCAAAGTGGTCAATGATGGAGTTACCATTGCTCGTGCTATTGAGCTCGCAGA
TCCCATGGAGAATGCTGGTGCTGCATTGATTCGTGAAGTTGCTAGCAAGACGAATGACTC
GGCTGGTGACGGAACCACTACCGCCTCTGTTCTCGCTAGGGAAATCATAAAATTGGGTAT
GTTGAGCATTACTTCAGGGGCAAATCCAGTGTCAGTTAAGAAGGGCATTGATAAGACTGT
TCAGAAATTGGTGGAGGAACTTGAGAAGAAGTCCAGGCCTGTCAAGGGTAGCGGGGATAT
TAAAGCTGTTGCTGCCATATCAGCTGGAAATGATGAATTTGTTGGGACTATGATTGCTGA
AGCTATTGACAAGGTTGGCCCTGATGGTGTCCTCTCAATCGAGTCATCATCATCATTTGA
GACGACAGTTGAAGTTGAAGAAGGGATGGAGCTTGACAGAGGATATATCTCCCCTCAGTT
TGTCACCAATCCTGAAAAATCTACTGTTGAGTTTGAAAATGCTCGGATTCTTGTCACTGA
TCAGAAGATATCATCGATAAAAGAAATCATTCCTCTGTTGGAGCAGACAACACAGTTAAG
AGCACCACTTCTTATAATTGCAGAGGATGTAAGTGGCGAGGCGCTGGCAACATTAGTTGT
AAACAAGCTTAGAGGAATTCTAAATGTGGCTGCAATCAAAGCTCCTGGCTTTGGTGAGAG
GCGTAAAGCTCTTCTTCAGGACATTGCCATTGTTACAGGTGCTGAATATCAATCCAAAGA
TCTTGGTCTACTAGTTGAGAATACAACAGTAGAGCAGCTTGGCATAGCTCGGAAAGTTAC
AATCTCAAGTTCCTCGACTACCATTATAGCAGATGCTGCTAGCAAAGATGATATCCAGGC
CAGAATTGCTCAGCTGAAGAGAGAGCTTTCTCAGACGGACTCGGCTTATGACTCTGAGAA
GTTGGCAGAGAGAATTGCAAAGCTTTCTGGTGGAGTTGCTGTGATCAAGGTTGGAGCCTC
AACCGAGGCGGAGCTTGAGGACCGCAAGCTCCGCATAGAGGACGCAAAGAATGCAACTTT
TGCAGCTATAGAGGAAGGTATTGTTCCAGGAGGTGGTGCAGCCTATGTTCATCTCTCAAC
ATTTGTACCGGCTATCAAGGAGACGTTGGATGATCCTGAAGAGCGGCTTGGTGCCGATAT
CATTCAGAAGGCTTTGGTGGCACCTGCAGCGTTGATAGCACATAATGCTGGGGTGGAAGG
TGAGGTGATTGTGGATAAAATCAGGGAAAGCGAATGGGAGTTTGGTTATAACGCCATGGC
GGACAAGCACGAGAACCTGGTGGAGGCTGGTGTGATCGACCCTGCGAAAGTGACAAGGTG
TGCCCTGCAGAACGCCGCCTCGGTGGCTGGAATGGTGCTGACTACCCAGGCAATCGTTGT
GGAGAAGCCCCAGAAGGCTCCTGCAGCTGCAGCGGCACCCTAGGATTCTTCCACACCATG
TAATACTTACTAGGCACGGAACAGGCACTAGCGTGCAAAAAAGAAGAAAAAAAAATGTGG
TGATCCTTAGAGTGACAAGGGAGAGAAAACTGATAAACTATTTTTTTTGTCATGCGTGGG
CAAGAATAAATTGAATCAATGTGGGATCCATGGGGCGAATTGCTATGCGCTGTTTTGGTT
GGTACTCAACTGCTCGTAGTGAACGAATTGCAGAGACAGGATTGATTGTGCTTGCTCTTG
CAAAGTGCGGAGAGGAATTGGACTCGGGTTTTGCTCTGCGTTGGACCGTTGGTGCAG