Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90402
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:60294432:60299347:-1 gene:SORBI_3010G268300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTAGTGACATTGATGAACTTGTTGCGGGCGTGCTGGCGACCATCGAACCGGCATGCC
CGAACAGGCTCAGATGTTACCGGTAGGCAGGATGGACTTCTATGGTACAAGGACGCCGGG
CAGCATGTCAATGGGGAGTTCTCCATGGCTGTTGTTCAGGCCAATAACTTACTTGAGGAC
CAGTGTCAGATCGAGTCGGGCCCACTGAGTTTTCTAGATTCTGGACCATATGGCACTTTC
GTTGGCGTTTACGATGGACATGGTGGTCCAGAGACGGCCTGCTATATCAATGAGCATCTC
TTCCAGAATCTGAAAAGATTTGCATCTGAGCAGAATGCAATGTCTGCTGATGTACTGAAG
AAGGCGTATGAAGCTACAGAAGATGGATTCTTCTCTGTTGTTACCAAACAATGGCCTATA
AAGCCTCAGATAGCAGCTGTCGGCTCATGCTGCCTGGTCGGTGTAATTTGTGGCGGCGTG
CTTTATGTTGCCAATGTTGGGGATTCCCGTGCCGTTTTAGGAAGACATGTTAAGGCCACT
GGAGAAGTTTTGGCTGTCCAACTGTCAGCAGAGCATAATGTAAGTATTGAGTCAGTCAGA
AAAGAACTGCAGTCAATGCACCCAGAAGATAGGCACATTGTTGTTCTCAAGCACAATGTT
TGGCGTGTAAAAGGATTGATTCAGGTTTGTAGATCAATTGGTGATGCTTATCTCAAAAAG
CAAGAGTTCAACAGGGAACCCCTATATGCAAAATTCCGCCTCCGTGAACCTTTTAACAAG
CCAATACTAAGTTCAGAACCATCAATATGTGTGCAACCACTACAACCACACGACCAGTTT
CTCATATTTGCATCTGATGGACTTTGGGAGCACTTAACCAACCAAGAGGCTGTTGATATT
GTTCACAGTAGCCCCCGCAGTGGCTGTGCTAGGAGGCTGATAAGAGCCGCACTGCAAGAG
GCAGCCAAGAAAAGAGAGATGAGATACTCGGACCTCAAGAAGATCGATCGCGGTGTTCGC
CGTCACTTCCACGACGACATAACAGTCATAGTAGTGTTCCTTGACTCCAGCCTCGTAAGT
AGGGCGAGCACGCACCGAGGTCCCACTCTTTCCCTGCGAGGTGGTGGCGCCAGCGCTGGC
CTGCGCAGCAACACGCTTGCACCTACGTGA

Peptide Sequence

PEP ID

EER90402
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:60294432:60299347:-1 gene:SORBI_3010G268300 transcript:EER90402 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLVTLMNLLRACWRPSNRHARTGSDVTGRQDGLLWYKDAGQHVNGEFSMAVVQANNLLED
QCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINEHLFQNLKRFASEQNAMSADVLK
KAYEATEDGFFSVVTKQWPIKPQIAAVGSCCLVGVICGGVLYVANVGDSRAVLGRHVKAT
GEVLAVQLSAEHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLKK
QEFNREPLYAKFRLREPFNKPILSSEPSICVQPLQPHDQFLIFASDGLWEHLTNQEAVDI
VHSSPRSGCARRLIRAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVS
RASTHRGPTLSLRGGGASAGLRSNTLAPT

Transcript Sequence

Transcript ID

EER90402
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:60294432:60299347:-1 gene:SORBI_3010G268300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACACGCCTTGGCTTCGCGCCACTCGCGGCCGCGGATCCCCACCGCCGTCCGTCGGTCGT
GATCCCCTCGCCGCCGCCGCCGCCGCCGCTTCAGCTAACCCTCGCCGCCCGTCGTCCCCG
ACTCCGGCCGGTCGCGCTCGCGCACCCACTCAAGTTTCCCATCCCGTGCTCCCCCTTCAC
CGCGTCGCCTCGTGTGGGTCGGGTTATAGGGTCGGGCGAGAGCGCGCCACCCGACCCGTT
TCGTGGCTGCTCCGGCTCCTTTTCCCCTTTTCCTCTGCTATTTTCTCTCTCCCCCTTCGT
CCAGACCCAGAAGGAGAGGGAGACAGAGAGGAGACGAGGAGCAGCAGCGTGGCGACGCCC
AAATCGAGCGACCTGATCGAGGCCCCTCGCCCCTACTCGCTTAATCCCAATCCGAGCCCG
CCAATTGGGCGTCCCGCCCACGCAAAGGTGCGATTTTTCCCCTCCTCCCTCCCGCTGCCT
GCCTGCCTCCCGTCTTGGAGGTTGGAGCCGCGTGCCCCAGCCGCCAGGATCGTTGACAGG
CACCCTCCCTCTTGATCCGAATCAGCGGGTTTGTCCTATTAGCTTTCGGTGCTTGCTTGC
GTGCCGTGGTATCGTTCCAATTTTGTGGTTTTTTTGTTCGTGGGCTAAGAAAAATCATGT
CTTGTTTCTCCAATTAACGGGGTGGGTGCCTGTCATGTTCGGGAAGCGCGTGAGCGTTTC
AGAGGAGAGAGGAGGAAGGGCGGAGGCTTTTCGGCGAAATTAATGTGTGAATTGCGGTGT
CCAATTTTATCTTTCGTTTCCTCTTTCGTGATGCAGTTCATCCGCGTCGCGGAGGAATAA
GGATAAGGAACCCAGAGAGAACTTAGCAATTTACCTGGCGAGGGGAGGAGGCTTTACGTA
ATTATAGTTCCTGGGGGGATTGGCTTTGGTTGTCATTTACATGCCTATACTAGATATAGT
TTCTTCTGCTTAGAATTCTGCATTTGTCATTGGATTCTCAGTATTTTTAAGTCCAGTGCT
AGCTTTGAACAATTGTTGGAAGGACATGTCATGATTATTTGCACTTCTACTCTACTGCTA
TTAAGAAGGGGATTCCTGGGGTCTAAGGGGTTTAGGGAACAGTTATGGCAACATTGATAT
AATACCTGTAGTGTTATTTGCTAACTGTCATGAAATAAAAGAAATAACGTTATCCACTTA
TCATTGAATCGTGCTTTCAGGTTGAAAGTCAATGGACTTCTCAGTTCTCAACAACGTTAA
TAAGCCATAGCTGTGTTTGGCTCATTTCTAGTTGTTTTTGTTGCAGGACACTGGGAAGAA
AACTACTGGCGTGCTGACAAATCCAACTGCGGTTTTCTTGGACTACAGATGAAGCGGGCT
CGAAGGCGTGTGTGCAAGAGATGACTGATGAGGGATGCTAGTGACATTGATGAACTTGTT
GCGGGCGTGCTGGCGACCATCGAACCGGCATGCCCGAACAGGCTCAGATGTTACCGGTAG
GCAGGATGGACTTCTATGGTACAAGGACGCCGGGCAGCATGTCAATGGGGAGTTCTCCAT
GGCTGTTGTTCAGGCCAATAACTTACTTGAGGACCAGTGTCAGATCGAGTCGGGCCCACT
GAGTTTTCTAGATTCTGGACCATATGGCACTTTCGTTGGCGTTTACGATGGACATGGTGG
TCCAGAGACGGCCTGCTATATCAATGAGCATCTCTTCCAGAATCTGAAAAGATTTGCATC
TGAGCAGAATGCAATGTCTGCTGATGTACTGAAGAAGGCGTATGAAGCTACAGAAGATGG
ATTCTTCTCTGTTGTTACCAAACAATGGCCTATAAAGCCTCAGATAGCAGCTGTCGGCTC
ATGCTGCCTGGTCGGTGTAATTTGTGGCGGCGTGCTTTATGTTGCCAATGTTGGGGATTC
CCGTGCCGTTTTAGGAAGACATGTTAAGGCCACTGGAGAAGTTTTGGCTGTCCAACTGTC
AGCAGAGCATAATGTAAGTATTGAGTCAGTCAGAAAAGAACTGCAGTCAATGCACCCAGA
AGATAGGCACATTGTTGTTCTCAAGCACAATGTTTGGCGTGTAAAAGGATTGATTCAGGT
TTGTAGATCAATTGGTGATGCTTATCTCAAAAAGCAAGAGTTCAACAGGGAACCCCTATA
TGCAAAATTCCGCCTCCGTGAACCTTTTAACAAGCCAATACTAAGTTCAGAACCATCAAT
ATGTGTGCAACCACTACAACCACACGACCAGTTTCTCATATTTGCATCTGATGGACTTTG
GGAGCACTTAACCAACCAAGAGGCTGTTGATATTGTTCACAGTAGCCCCCGCAGTGGCTG
TGCTAGGAGGCTGATAAGAGCCGCACTGCAAGAGGCAGCCAAGAAAAGAGAGATGAGATA
CTCGGACCTCAAGAAGATCGATCGCGGTGTTCGCCGTCACTTCCACGACGACATAACAGT
CATAGTAGTGTTCCTTGACTCCAGCCTCGTAAGTAGGGCGAGCACGCACCGAGGTCCCAC
TCTTTCCCTGCGAGGTGGTGGCGCCAGCGCTGGCCTGCGCAGCAACACGCTTGCACCTAC
GTGACTGTAAAGTGCCTGGTGGAGAGGAGGCTACAGCCCTGACTGGAGGAGGTTTTCTTT
CCTCGTGTCGACTGTGTTATATATGTACTTGTACCGGCCAAGATCATCCATCCCCCCTCA
ATGGTGTAAAGGAGAGGCGCGGAAGCTCCTCCCCAGTGTCTTTGAATGCCCTAAATGGTG
TCAAGGTGTGGACTCAAGTTGATAGCTCGTCGCTGTTCTTCTGATGATGCTCTGTGGAAA
GCTCAAATCCTTTCCACCTGAAAAACAAGTAATATGTCTTCCAGTGCTGGAATTAACCCT
AGTGCATATATATATATATGAAATAATAATAAGCCAAAAGGAGGAGTAACTTATTTAACT
GATGCTGTAAGGTGTATGGTATGTTTTGTATGTGTACTGTTTTTTACTGCTACTGCATCT
ACTGTTGTTAATTGACCGCTGGTAAAGTGAAATCAGTGATTTGGTCTCACTATTATCAGT
TGTTCCCAGTATTACTGATTTGACTGTTCCTCCTCATAAAGCATGCAATTCTAGTAGTGT
TAT