Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90222
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:57273792:57277651:-1 gene:SORBI_3010G230000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCCCCCCTCCTCGCCCGCGCCCCTCTTCCTGGTCGTCCTCTTCCTCCTCGGCTCG
CTGCTCCTGCAGGCGCGCGCCGACGACCCCTACAGGTTCTACACCTGGAACGTCACCTTC
GGCGACATCTACCCGCTCGGCGTCAAGCAGGAGGGGATACTGATCAACGGCCAGTTCCCG
GGGCCGCAGATCGACGCCGTCACCAACGACAACATCATCGTCAACGTCTTCAACAACCTG
CCGGTCCCCTTCCTCCTCTCCTGGCAAGGAATTCAGCAGCGGAGGAGCTCATGGCAAGAC
GGCGTGTATGGTACCAACTGCCCCATCCCTCCGGGTGGCAATTTCACTTACAACATGCAG
TTCAAGGACCAAATCGGGACCTACTACTACTTCCCTTCCCTTCTATTTCACAAGGCAGCC
GGTGGTTATGGTGGCATCAGGGTTCTTAGCCGGCCGAGGATCCCTGTCCCATTTGACCCA
CCTGCCGGTGATTTCACCATATTAGCTGGTGACTGGTTCAAGCTCAATCACACTGACCTG
AAAGGCATTTTGGATAGTGGTAATGACCTGCCGTTGCCTGATGGCCTTCTTATTAATGGC
CAAGGCTGGAATGGCAACAGATTTACAGTAGACCAAGGGAAAACATATCGTTTTCGGGTG
TCGAATGTGGGCATTGCAACGTCAGTGAATATAAGGATTCAAGGCCATTCCATGCTCCTG
GTAGAGGTGGAGGGGTCTCACACCATGCAGAGCACATACACATCCATCGACATCCATCTA
GGCCAATCATACTCGTTCCTTGTTACTGCTGATCAGCCACCTGCAGACTACTCCATAATT
ATCTCCACTCGTTTTACCACCCCTGTCCTCACCACCACTGCCATCCTCCACTACAGCAAT
TCAAATGGTGCTGCAACAGTACCACCTCCCGCAGCGCCTACAGTTGAGATCGATTTTTCT
CTCAACCAGGCTAGATCGATTCGGTGGAATCTGACAGCGAGTGGACCAAGGCCAAATCCT
CAAGGTTCTTACCACTATGGCCTCGTCAACACCACAAGGACCATCATACTCGCTAACTCA
CGGGCAACCATCAACGGCAAGCTGAGATACGCAGTCAACAGCATCTCCTTCATCCCGGCT
GACACCCCTCTTAAAGTTGCTGATTTCTACAAGATCCCAGGGGTTTTCACGCTGGGCAGC
ATGCCCGACAACCCAACCGGTGGCGGTGCTTACCTCCAGACATCTGTCATGGCGGCCAAC
ATGCGGGACTATGTTGAGATCGTCTTTCAAAATACAGAGAACTTCGTGCAGTCGTGGCAC
ATTGACGGTTACGCGTTCTGGGTCGTCGGGATGGATGGAGGACAGTGGACACCGGCTAGT
CGTCAGGGATACAACCTTAGAGACGCCATTGCTCGGTACACATTGCAGGTGTACCCTCAG
TCATGGACAGCTATCTACATGCCGCTGGACAACGTGGGGATGTGGAACGTGAGGTCGGAG
AGCTGGGCCAGGCAGTACCTCGGCCAGCAGTTCTACCTCCGCGTCTACTCGCCAGCGAAC
TCGTGGCGGGACGAGAACCCGATCCCCAAGAACGCACTGCTCTGCGGCCGGGCCTCTGGC
CGCCGGACGAGGCCTCTCTGA

Peptide Sequence

PEP ID

EER90222
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:57273792:57277651:-1 gene:SORBI_3010G230000 transcript:EER90222 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEPPSSPAPLFLVVLFLLGSLLLQARADDPYRFYTWNVTFGDIYPLGVKQEGILINGQFP
GPQIDAVTNDNIIVNVFNNLPVPFLLSWQGIQQRRSSWQDGVYGTNCPIPPGGNFTYNMQ
FKDQIGTYYYFPSLLFHKAAGGYGGIRVLSRPRIPVPFDPPAGDFTILAGDWFKLNHTDL
KGILDSGNDLPLPDGLLINGQGWNGNRFTVDQGKTYRFRVSNVGIATSVNIRIQGHSMLL
VEVEGSHTMQSTYTSIDIHLGQSYSFLVTADQPPADYSIIISTRFTTPVLTTTAILHYSN
SNGAATVPPPAAPTVEIDFSLNQARSIRWNLTASGPRPNPQGSYHYGLVNTTRTIILANS
RATINGKLRYAVNSISFIPADTPLKVADFYKIPGVFTLGSMPDNPTGGGAYLQTSVMAAN
MRDYVEIVFQNTENFVQSWHIDGYAFWVVGMDGGQWTPASRQGYNLRDAIARYTLQVYPQ
SWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASG
RRTRPL

Transcript Sequence

Transcript ID

EER90222
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:57273792:57277651:-1 gene:SORBI_3010G230000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCGCAGCAGCAGCAGCAGATCCCCGTTTCCTCCCTCCTTCCGTCCCGTCCCGTCCCTTC
CCTCGCTGACACTGTTTGACCCCTGCCGCTCGTGCCGCGTCGTCCTCCTGCTCCTGCCCT
CCAGCTAATAAGGCCGAGCGGCGAGGCGATAGCAGTGCTAGCTAGTGTAGTAGCGCCGTA
CCACAGACGGGGAGAAGAATGGAGCCCCCCTCCTCGCCCGCGCCCCTCTTCCTGGTCGTC
CTCTTCCTCCTCGGCTCGCTGCTCCTGCAGGCGCGCGCCGACGACCCCTACAGGTTCTAC
ACCTGGAACGTCACCTTCGGCGACATCTACCCGCTCGGCGTCAAGCAGGAGGGGATACTG
ATCAACGGCCAGTTCCCGGGGCCGCAGATCGACGCCGTCACCAACGACAACATCATCGTC
AACGTCTTCAACAACCTGCCGGTCCCCTTCCTCCTCTCCTGGCAAGGAATTCAGCAGCGG
AGGAGCTCATGGCAAGACGGCGTGTATGGTACCAACTGCCCCATCCCTCCGGGTGGCAAT
TTCACTTACAACATGCAGTTCAAGGACCAAATCGGGACCTACTACTACTTCCCTTCCCTT
CTATTTCACAAGGCAGCCGGTGGTTATGGTGGCATCAGGGTTCTTAGCCGGCCGAGGATC
CCTGTCCCATTTGACCCACCTGCCGGTGATTTCACCATATTAGCTGGTGACTGGTTCAAG
CTCAATCACACTGACCTGAAAGGCATTTTGGATAGTGGTAATGACCTGCCGTTGCCTGAT
GGCCTTCTTATTAATGGCCAAGGCTGGAATGGCAACAGATTTACAGTAGACCAAGGGAAA
ACATATCGTTTTCGGGTGTCGAATGTGGGCATTGCAACGTCAGTGAATATAAGGATTCAA
GGCCATTCCATGCTCCTGGTAGAGGTGGAGGGGTCTCACACCATGCAGAGCACATACACA
TCCATCGACATCCATCTAGGCCAATCATACTCGTTCCTTGTTACTGCTGATCAGCCACCT
GCAGACTACTCCATAATTATCTCCACTCGTTTTACCACCCCTGTCCTCACCACCACTGCC
ATCCTCCACTACAGCAATTCAAATGGTGCTGCAACAGTACCACCTCCCGCAGCGCCTACA
GTTGAGATCGATTTTTCTCTCAACCAGGCTAGATCGATTCGGTGGAATCTGACAGCGAGT
GGACCAAGGCCAAATCCTCAAGGTTCTTACCACTATGGCCTCGTCAACACCACAAGGACC
ATCATACTCGCTAACTCACGGGCAACCATCAACGGCAAGCTGAGATACGCAGTCAACAGC
ATCTCCTTCATCCCGGCTGACACCCCTCTTAAAGTTGCTGATTTCTACAAGATCCCAGGG
GTTTTCACGCTGGGCAGCATGCCCGACAACCCAACCGGTGGCGGTGCTTACCTCCAGACA
TCTGTCATGGCGGCCAACATGCGGGACTATGTTGAGATCGTCTTTCAAAATACAGAGAAC
TTCGTGCAGTCGTGGCACATTGACGGTTACGCGTTCTGGGTCGTCGGGATGGATGGAGGA
CAGTGGACACCGGCTAGTCGTCAGGGATACAACCTTAGAGACGCCATTGCTCGGTACACA
TTGCAGGTGTACCCTCAGTCATGGACAGCTATCTACATGCCGCTGGACAACGTGGGGATG
TGGAACGTGAGGTCGGAGAGCTGGGCCAGGCAGTACCTCGGCCAGCAGTTCTACCTCCGC
GTCTACTCGCCAGCGAACTCGTGGCGGGACGAGAACCCGATCCCCAAGAACGCACTGCTC
TGCGGCCGGGCCTCTGGCCGCCGGACGAGGCCTCTCTGAAGCTGAAGCCCTGAACCCAAG
ACGGCAAGACCTTGTTTGTTTCTGGCAACGAAGGGGTGGCCGGAACTTCCAGGGATTTGT
TGAACAGAGATAATTGGGGTGTTCAGATTGCTGAACAGAGTTCCGTTTTGTGGCGCTGAT
GATCAACCAGCTCATATATTATTTAGCAATTGTAGTTAAAACATTCCCGGTGGATTTGTT
GTATGGGAAGCTTTCTCGCTTCCTCGCTCACATCATTGATGATGATAATGATAATATTCA
TAGTTACCTG