Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90163
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:56100666:56104151:-1 gene:SORBI_3010G218200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTCCACTTCATCTCCTCTTCCCCTCTCCGTCCCCGATTCCTCCTCCTCCCTAGCCCA
CCCTCCAATCTTCGCTTCCTCGCCATGAGCGCCGCCCCCTCGAGCTCCTCGTCCCGTTCG
GTGCGCGGTGTGGCGGTGCCGGTGCCTTCCCTCAGCGCCGGCGAGGCCTGCGCAGTGGCA
GACGAGGCCTTCCAGAGGTACACGTCGCCGAGCTTGAGGAGAGGCGGCGCCGGGGTGGCC
GTCGTGTGGTTCAGGAATGACCTCCGAGTTCTTGATAACGAGGCGCTTCTGCGTGCGTGG
TCCGCTTCCGAGGCGGTCCTGCCGGTGTACTGCGTCGACCCACGGGTCTTTGCGGGTAGC
ACGCATTACTTTGGGTTCCCCAAGACGGGAGCATTGAGGGCGCAGTTCTTGATAGAGTGT
TTAGGAGACCTGAAGCAGATTCTGAGGAAAAAGGGCCTCGATTTGCTAGTCCGGCATGGC
AAGCCTGAAGAGATCCTTCCATCAATTGCAAAGGCTGTCAGTGCACACACAATTTATGCT
CATAAGGAAACCTGTAGCGAAGAGCTCCTTGTCGAACGCCTCGTTAGCAAAGGCTTGGAA
CAAGTTCAGATTGCTCAAGGAGGTGCATCTGTCCCGAAGAAGCCTCTGAACCCCAGGTTG
CAGCTCATCTGGGGAGCAACAATGTACCACATCGATGACCTCCCGTTCCCAGTTAGCAAC
TTGCCAGACGTGTACACCCAGTTCAGAAAGGCAGTTGAATCGAAGTCCTCAGTTAGGAAC
TGCACCAAGTTGCCACCGTCGCTTGGTCCGCTCCCTAGTTCCAGCATAGATGAGATTGGA
GGATGGGGGGCAATACCAACACTGGAGTCATTAGGCCTGAGTGTTACAAAGTCTGAGAAA
GGAATGCATTTCATAGGAGGAGAGAATGCAGCTCTTGGAAGAGTACATGAGTACTTCTGG
AAGAAGGATCAGTTGAAAGACTACAAGGTGACTAGGAATGGCATGTTAGGTCCAGACTAC
TCCACAAAGTTCTCTCCTTGGCTTGCTTCTGGCAGTCTTTCACCACGTTATATTTGCGAA
GAGGTGAAGAGATATGAGAAGCAAAGAGTGGCAAATGATTCTACATATTGGGTTTTGTTT
GAGTTGATATGGAGAGACTACTTCAGATTTCTATCAGCAAAATATGGGAACACCATATTT
CATCTGGGAGGTCCGAGGAAAGTAGTATCAAAGTGGAGTCAGGACCAAGCACTGTTTGAA
TCATGGAGAGATGGTCGAACTGGATATCCTCTTATTGATGCCAATATGAGGGAGCTTTCA
GCCACCGGTTTCATGTCCAACCGTGGTCGTCAGATTGTCTGCTCATTTCTTGTCCGAGAT
ATGGGTATTGATTGGCGAATGGGAGCCGAATGGTTCGAGACATGCTTATTGGATTATGAC
CCAGCTTCAAATTATGGCAATTGGACGTATGGAGCCGGAGTTGGCAATGATCCAAGGGAA
GATCGATACTTCAGTATCCCGAAGCAAGCAAAGTCATATGATCCTGAAGGTGAATACGTT
GCATACTGGTTACCAGAACTTCGGTCACTTGCAAAGGAAAGGAGAAATTTCCCAGGGGCC
TCATACATCAGGCAGATAGTACAACTGAAGTTTGATGGTGGAAATCAGAAGAAGGATCAG
CAATTCAACCGGCAGAGAAGACCAAACAATATGTACAGAAGACAAGTAAAATAG

Peptide Sequence

PEP ID

EER90163
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:56100666:56104151:-1 gene:SORBI_3010G218200 transcript:EER90163 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLHFISSSPLRPRFLLLPSPPSNLRFLAMSAAPSSSSSRSVRGVAVPVPSLSAGEACAVA
DEAFQRYTSPSLRRGGAGVAVVWFRNDLRVLDNEALLRAWSASEAVLPVYCVDPRVFAGS
THYFGFPKTGALRAQFLIECLGDLKQILRKKGLDLLVRHGKPEEILPSIAKAVSAHTIYA
HKETCSEELLVERLVSKGLEQVQIAQGGASVPKKPLNPRLQLIWGATMYHIDDLPFPVSN
LPDVYTQFRKAVESKSSVRNCTKLPPSLGPLPSSSIDEIGGWGAIPTLESLGLSVTKSEK
GMHFIGGENAALGRVHEYFWKKDQLKDYKVTRNGMLGPDYSTKFSPWLASGSLSPRYICE
EVKRYEKQRVANDSTYWVLFELIWRDYFRFLSAKYGNTIFHLGGPRKVVSKWSQDQALFE
SWRDGRTGYPLIDANMRELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYD
PASNYGNWTYGAGVGNDPREDRYFSIPKQAKSYDPEGEYVAYWLPELRSLAKERRNFPGA
SYIRQIVQLKFDGGNQKKDQQFNRQRRPNNMYRRQVK

Transcript Sequence

Transcript ID

EER90163
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:56100666:56104151:-1 gene:SORBI_3010G218200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTACCCTGGCCTACAATATCCACAATTCCACATCCTGTTTCCACAGGCCCACATCAGGC
CACGTAGCTCCACTAGAACACGAACACGTGGCACCATTCTCCGCTCTTCCCTCCACCTTC
CCCTTCCAACTTTCCAAATCACCTCACTTCTCAAAACTCTCAACTGCCAGTCGCATCAAG
AAATGCTCCACTTCATCTCCTCTTCCCCTCTCCGTCCCCGATTCCTCCTCCTCCCTAGCC
CACCCTCCAATCTTCGCTTCCTCGCCATGAGCGCCGCCCCCTCGAGCTCCTCGTCCCGTT
CGGTGCGCGGTGTGGCGGTGCCGGTGCCTTCCCTCAGCGCCGGCGAGGCCTGCGCAGTGG
CAGACGAGGCCTTCCAGAGGTACACGTCGCCGAGCTTGAGGAGAGGCGGCGCCGGGGTGG
CCGTCGTGTGGTTCAGGAATGACCTCCGAGTTCTTGATAACGAGGCGCTTCTGCGTGCGT
GGTCCGCTTCCGAGGCGGTCCTGCCGGTGTACTGCGTCGACCCACGGGTCTTTGCGGGTA
GCACGCATTACTTTGGGTTCCCCAAGACGGGAGCATTGAGGGCGCAGTTCTTGATAGAGT
GTTTAGGAGACCTGAAGCAGATTCTGAGGAAAAAGGGCCTCGATTTGCTAGTCCGGCATG
GCAAGCCTGAAGAGATCCTTCCATCAATTGCAAAGGCTGTCAGTGCACACACAATTTATG
CTCATAAGGAAACCTGTAGCGAAGAGCTCCTTGTCGAACGCCTCGTTAGCAAAGGCTTGG
AACAAGTTCAGATTGCTCAAGGAGGTGCATCTGTCCCGAAGAAGCCTCTGAACCCCAGGT
TGCAGCTCATCTGGGGAGCAACAATGTACCACATCGATGACCTCCCGTTCCCAGTTAGCA
ACTTGCCAGACGTGTACACCCAGTTCAGAAAGGCAGTTGAATCGAAGTCCTCAGTTAGGA
ACTGCACCAAGTTGCCACCGTCGCTTGGTCCGCTCCCTAGTTCCAGCATAGATGAGATTG
GAGGATGGGGGGCAATACCAACACTGGAGTCATTAGGCCTGAGTGTTACAAAGTCTGAGA
AAGGAATGCATTTCATAGGAGGAGAGAATGCAGCTCTTGGAAGAGTACATGAGTACTTCT
GGAAGAAGGATCAGTTGAAAGACTACAAGGTGACTAGGAATGGCATGTTAGGTCCAGACT
ACTCCACAAAGTTCTCTCCTTGGCTTGCTTCTGGCAGTCTTTCACCACGTTATATTTGCG
AAGAGGTGAAGAGATATGAGAAGCAAAGAGTGGCAAATGATTCTACATATTGGGTTTTGT
TTGAGTTGATATGGAGAGACTACTTCAGATTTCTATCAGCAAAATATGGGAACACCATAT
TTCATCTGGGAGGTCCGAGGAAAGTAGTATCAAAGTGGAGTCAGGACCAAGCACTGTTTG
AATCATGGAGAGATGGTCGAACTGGATATCCTCTTATTGATGCCAATATGAGGGAGCTTT
CAGCCACCGGTTTCATGTCCAACCGTGGTCGTCAGATTGTCTGCTCATTTCTTGTCCGAG
ATATGGGTATTGATTGGCGAATGGGAGCCGAATGGTTCGAGACATGCTTATTGGATTATG
ACCCAGCTTCAAATTATGGCAATTGGACGTATGGAGCCGGAGTTGGCAATGATCCAAGGG
AAGATCGATACTTCAGTATCCCGAAGCAAGCAAAGTCATATGATCCTGAAGGTGAATACG
TTGCATACTGGTTACCAGAACTTCGGTCACTTGCAAAGGAAAGGAGAAATTTCCCAGGGG
CCTCATACATCAGGCAGATAGTACAACTGAAGTTTGATGGTGGAAATCAGAAGAAGGATC
AGCAATTCAACCGGCAGAGAAGACCAAACAATATGTACAGAAGACAAGTAAAATAGAAGG
CTCTTGATTCACTCGAAATAGAACCATCTTATCAGTAGTAGATGGAAGTAACTTTTTTAC
ATAACTGATTGTAGTGTCAACATGCACGAATTTCTCTATGGTCTTATGCAATGTTCATTG
ATGCATTCAGCTACACTTTATGTTTGTCAGCAGATCCAGCACAAAAGATCAAAAGCCCTA
AACATTCAC