Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90117
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:55151625:55159501:-1 gene:SORBI_3010G208400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCACCACGACCACGAGGTGCCTGGTCATCGTCGTCAGCCCCTCCTCTGCCCGCC
TGCTTCCTGCCACTTCTGCTACTCCTGGCGTCCTTCTCGGCAGCACCAACCGCAGCAGCA
GCGCGGCCGTCCTCCACCCCCAAGAAGCCAGCTGCTGCTTTCCCGGCTGCCGTCGCTCCT
CTGCACCTGCAAGCTCTGAAGCGCCACCAGCGGGCAAGCAGCAGCATCAGGGCCGGCGGC
GAGCTCTTCGTCGCCGCGGCCGCCGATGGCACGGCCAACGGCACCGCGGCGAAGAAGCCC
TTCACGGTTCACTACTTCGCGCAGGAGCTGGACCACTTCACCTTCACGCCCAACGCGTCC
ATGGTCTTCCGCCAGAAGTACCTCCTCAACGACACCTTCTGGCGGAGGCCCAGCGCCGGC
GACGGCGACGGCGCCGGGCCGCTGTTCGTGTACACCGGCAACGAGGGCGACATCGAGTGG
TTCGCCACCAACACGGGATTCATGTTCGACATCGCGCCCAAGTTCGGCGCCCTCCTCGTC
TTCATCGAGCACCGGTTCTACGGGGAGTCGAAGCCGTTCGGGAACGACTCGTACAAGTCG
GCCGAGACGCTGGGCTACCTGACGTCCACGCAGGCGCTCGCTGACTTCGCCATCCTCATC
AGGAGCCTGAAGAAGAACCTCTCCGCCGAGGCCGCTCCCGTCGTCGTCTTCGGCGGCTCA
TACGGCGGAATGTTGGCTTCTTGGTTCAGGCTCAAGTACCCCCACGTCACCATTGGGGCC
GTAGCGTCCTCCGCGCCAATCCTGCAGTTCGACTACATAACACCCTGGAGCAGCTTCTAC
GACGGTGTCTCGCAGGACTTCAAGTCTGAAAGCCTGAACTGCTTCAGTGTCATCAAGGGA
ACCTGGGATGTCCTGGATGAGAGGGGTTCCACAGACAAAGGGCTCCTGGACCTCAGCAAA
CTTTTCAGAGCCTGCAAGACAGTGAAGTACGCTTATTCAATCCGAAACTGGCTGTGGACA
GCATTCTCTTACACTGCCATGGTGGACTATCCGACCCCAGCCAATTTCCTGGAGAATCTG
CCTGCCTACCCAGTCAAGGAGATGTGCAAGATCATCGATGGGTTTCCCACAGGCGCAGAC
ATCCTGGAGAAGGCATTCGCAGCGGCAAGCTTGTACTACAACTACACAGGAGACCAGACT
TGCAATAAGATAGAGGATGGAGACGACCCGCATGGCCTCGATGGCTGGCAATGGCAGGCC
TGCACAGAGATGATCATGCCAATGACGGTCTCCAACGAGAGCATGTTCCCACCATCCTCC
TTCAGCTATGATGAAAGGTCCGATGAATGTTTCCAGAGCTGGGGGGTTCGACCGAGACCG
CATTGGATCACAACTGAATATGGTGGATATAAAATTGATAAGGTGCTCAAGAGGTTTGGG
AGCAACATCATCTTCTCTAATGGAATGCGAGACCCATGGAGTCGAGGCGGGGTTCTCAAG
AACATCTCATCCAGTATCATTGCCCTTGTCACAGAGAAAGGTGCTCATCATTTAGACTTC
AGATCTTCAACAAAGGGTGATCCAGACTGGGTTATAGAACAAAGGAGACAAGAAGTTGAC
ATCATTCAGGGATGGATTGATCAGTATCATCAGGACATGGCGGAAACATCTTCCTGA

Peptide Sequence

PEP ID

EER90117
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:55151625:55159501:-1 gene:SORBI_3010G208400 transcript:EER90117 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAPRPRGAWSSSSAPPLPACFLPLLLLLASFSAAPTAAAARPSSTPKKPAAAFPAAVAP
LHLQALKRHQRASSSIRAGGELFVAAAADGTANGTAAKKPFTVHYFAQELDHFTFTPNAS
MVFRQKYLLNDTFWRRPSAGDGDGAGPLFVYTGNEGDIEWFATNTGFMFDIAPKFGALLV
FIEHRFYGESKPFGNDSYKSAETLGYLTSTQALADFAILIRSLKKNLSAEAAPVVVFGGS
YGGMLASWFRLKYPHVTIGAVASSAPILQFDYITPWSSFYDGVSQDFKSESLNCFSVIKG
TWDVLDERGSTDKGLLDLSKLFRACKTVKYAYSIRNWLWTAFSYTAMVDYPTPANFLENL
PAYPVKEMCKIIDGFPTGADILEKAFAAASLYYNYTGDQTCNKIEDGDDPHGLDGWQWQA
CTEMIMPMTVSNESMFPPSSFSYDERSDECFQSWGVRPRPHWITTEYGGYKIDKVLKRFG
SNIIFSNGMRDPWSRGGVLKNISSSIIALVTEKGAHHLDFRSSTKGDPDWVIEQRRQEVD
IIQGWIDQYHQDMAETSS

Transcript Sequence

Transcript ID

EER90117
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:55151625:55159501:-1 gene:SORBI_3010G208400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGTCACCAGGCAAAATCGTGTTTTTTCATCAAAAACAAGGCGAAATCGTCCTCATCTGA
CTCTCCTCCGCGCGCCCGCCCGTGCGCCTTCCTTTTAAAAATCCCCCACCAAGAGTGACG
ACTGACGAGAGAGAGGGAGAGAGAGAGACAGAGAGGACGGCAAACAATGGCGGCACCACG
ACCACGAGGTGCCTGGTCATCGTCGTCAGCCCCTCCTCTGCCCGCCTGCTTCCTGCCACT
TCTGCTACTCCTGGCGTCCTTCTCGGCAGCACCAACCGCAGCAGCAGCGCGGCCGTCCTC
CACCCCCAAGAAGCCAGCTGCTGCTTTCCCGGCTGCCGTCGCTCCTCTGCACCTGCAAGC
TCTGAAGCGCCACCAGCGGGCAAGCAGCAGCATCAGGGCCGGCGGCGAGCTCTTCGTCGC
CGCGGCCGCCGATGGCACGGCCAACGGCACCGCGGCGAAGAAGCCCTTCACGGTTCACTA
CTTCGCGCAGGAGCTGGACCACTTCACCTTCACGCCCAACGCGTCCATGGTCTTCCGCCA
GAAGTACCTCCTCAACGACACCTTCTGGCGGAGGCCCAGCGCCGGCGACGGCGACGGCGC
CGGGCCGCTGTTCGTGTACACCGGCAACGAGGGCGACATCGAGTGGTTCGCCACCAACAC
GGGATTCATGTTCGACATCGCGCCCAAGTTCGGCGCCCTCCTCGTCTTCATCGAGCACCG
GTTCTACGGGGAGTCGAAGCCGTTCGGGAACGACTCGTACAAGTCGGCCGAGACGCTGGG
CTACCTGACGTCCACGCAGGCGCTCGCTGACTTCGCCATCCTCATCAGGAGCCTGAAGAA
GAACCTCTCCGCCGAGGCCGCTCCCGTCGTCGTCTTCGGCGGCTCATACGGCGGAATGTT
GGCTTCTTGGTTCAGGCTCAAGTACCCCCACGTCACCATTGGGGCCGTAGCGTCCTCCGC
GCCAATCCTGCAGTTCGACTACATAACACCCTGGAGCAGCTTCTACGACGGTGTCTCGCA
GGACTTCAAGTCTGAAAGCCTGAACTGCTTCAGTGTCATCAAGGGAACCTGGGATGTCCT
GGATGAGAGGGGTTCCACAGACAAAGGGCTCCTGGACCTCAGCAAACTTTTCAGAGCCTG
CAAGACAGTGAAGTACGCTTATTCAATCCGAAACTGGCTGTGGACAGCATTCTCTTACAC
TGCCATGGTGGACTATCCGACCCCAGCCAATTTCCTGGAGAATCTGCCTGCCTACCCAGT
CAAGGAGATGTGCAAGATCATCGATGGGTTTCCCACAGGCGCAGACATCCTGGAGAAGGC
ATTCGCAGCGGCAAGCTTGTACTACAACTACACAGGAGACCAGACTTGCAATAAGATAGA
GGATGGAGACGACCCGCATGGCCTCGATGGCTGGCAATGGCAGGCCTGCACAGAGATGAT
CATGCCAATGACGGTCTCCAACGAGAGCATGTTCCCACCATCCTCCTTCAGCTATGATGA
AAGGTCCGATGAATGTTTCCAGAGCTGGGGGGTTCGACCGAGACCGCATTGGATCACAAC
TGAATATGGTGGATATAAAATTGATAAGGTGCTCAAGAGGTTTGGGAGCAACATCATCTT
CTCTAATGGAATGCGAGACCCATGGAGTCGAGGCGGGGTTCTCAAGAACATCTCATCCAG
TATCATTGCCCTTGTCACAGAGAAAGGTGCTCATCATTTAGACTTCAGATCTTCAACAAA
GGGTGATCCAGACTGGGTTATAGAACAAAGGAGACAAGAAGTTGACATCATTCAGGGATG
GATTGATCAGTATCATCAGGACATGGCGGAAACATCTTCCTGACAAAGCGCCATTGCGGT
TACAGTCAGGGAAAACAAATATTTGGATCCATGGAAAAAATAAAGGCCAAAAAAGGAATT
TGTATTCTTACACATGATCAACAGGGCAAGTTAACAGAAGGTGAAAAAAATCAATAATTT
ACGCACTTAGCATCAGAAACCGCTAAATCTTACAAAAAGCAAGCCCCCCTTTATCAATTA
GAAGGGGTGGTGCAGGTTCTGGGACTCCAACCCGCACCGGAGCAGTGATTGACTGATCGT
GCAGGCCTCTGGCCAGTAGATCAAAGCAGTCTTGGCTCAGTTTCTGTTTATTAACTATAT
TGCTTCTGTTGTGCTCAGCAAGGAACAGTGGTGCTATATCGACACTTTCTCTCTGTTTCA
TGGATATAGAAGGGCTATCCATATTTCGAGAAA