Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER90031
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:52919010:52921032:-1 gene:SORBI_3010G188900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAATGGCGCCGCCTCTTCCTCCCTCGCCACCACTCCCTCTCCTCCGGCGCCCAGGCC
AGCTTCGCTGTCGTCGCCGGTGAGATCTCTGCCCTCCTCACCGCCCGACGTTTTCGGGTT
TCCGTTAACCGGGCGGAGCAGTTCATACGCTCCAATGCCGTCGGGGCGTCCGGCGTCCCC
GAGATGTACCACTTGTTGGCCGCCGCTGGCCCACGTGAGCAGTGCCTTTACCTCAGCGGC
ACGGCCTCCGTGCTGGTCGAGGCATCGGCGCGCGCGGACCTCCCCGACGGTGCGCTGCTG
CTGATCGACCTGCTCATCCACACGCCCATGTTGCCGCGGCCGTCGGCGATCTCCTGCGGC
CACCTCATAACGAAGCTCCTCTCCCTCGGACGCCGCGCGGATGCGCGCCGCGTGTTGGAG
ACCCTCGCCGATCGCAAGCGCGACTGGGCGGTCGCCACGGTTTGGAGAGCCGGGAGAGCG
GCCGAGGCCGTCAAGGTGTTCGGCGAAATGGCGGACACGGCCGCGGCGCCAAAACATTCC
AGGTACCGGTACCTTACCAAGAATATGATGAATGACTGCCTGATGAAGGGAGATCTGGAG
GCTGCTTCAGAGTTGCAGACCCAGATGGTGCTGGTGGGCTTGAAGGTACCCAAGCAACAG
CGGCGAATGCTTCGGATGCTGGAAAAATTCCGGCAGTGCCCACACAAAATCCCCCGGAAT
GTGCTCATTGAAATCTGCATCATGGCGGACAGCGTCGATGGTGCCATCCGTTGGCTCCAT
CACATGGGCAATGATGACATGGCACCTCCCAATGCTCACTCCTACAACCTAGTACTCGCC
GGGCTCTGGAAGGCTGGTAGGGGCGGCGATGCTGTTGAGATGTTCGACGAGATGGCAGAC
ATGTCCCTGGCGCCAAATAATTTCACATATACTGTCATGATCGATGGCCACTTGAAGAGG
CTGAGTCATGTTCTGGCCTCAAAGAAGAACGAGAGTGGAGATCTGGAGGCTGCGCTCGTG
CTGCGGGCTCAGATGGTGCAGGATGGCTTCAAGCCAGACGAATACACTTACTATTTGCTG
ATGGCTGAACTCTGCTTGGCTGAACGGCTGGGAGACGTTACAGCTCTGTTCCATGAGATG
CTGATACAAGGGACGACACTACACAAGATCGTTCATGGAAGCCTGTTCAAGTTCCTCTTC
AGAATCAACGAAGATCAGCTACTGGGCATTGTTGAAAAATCTGCAAAGGATAGTGCTGCT
GCAGCGGATAATGGTTGCATTACCTTGTTAAAGGAGCTTTGCAGGATTCAGAAAGTTTCA
CTCGCGGAGAAGGTGCTGCGGACATTTGTGGGAGCAGGGTTGGTCCCGACGACAGAGATG
TACAACATTCTCGTTGATGGGTATTGCAAGATCAAGGAACTCCAAGGGGCATTCTCGTTG
TGTCGCCAGATGGAATCACATGGTCAGCTTGTACCTAATGAAGCCACCTACGAGGCTCTG
CTGCTGGCCGTGCTCAACAACATGAGCATCATCTATTGGGAGGACGTTCTGGAGTTGTTT
GAGAAAAATGGAGTTAGTACTGACGCACTGAACTCCGGCAGTTCGGCTACACATGGATTC
AAGTATAGGTCTAGTCTGATACCTAGAATGTTTAACAAACTGGTGAGCAAGCTATTTTAG

Peptide Sequence

PEP ID

EER90031
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:52919010:52921032:-1 gene:SORBI_3010G188900 transcript:EER90031 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEWRRLFLPRHHSLSSGAQASFAVVAGEISALLTARRFRVSVNRAEQFIRSNAVGASGVP
EMYHLLAAAGPREQCLYLSGTASVLVEASARADLPDGALLLIDLLIHTPMLPRPSAISCG
HLITKLLSLGRRADARRVLETLADRKRDWAVATVWRAGRAAEAVKVFGEMADTAAAPKHS
RYRYLTKNMMNDCLMKGDLEAASELQTQMVLVGLKVPKQQRRMLRMLEKFRQCPHKIPRN
VLIEICIMADSVDGAIRWLHHMGNDDMAPPNAHSYNLVLAGLWKAGRGGDAVEMFDEMAD
MSLAPNNFTYTVMIDGHLKRLSHVLASKKNESGDLEAALVLRAQMVQDGFKPDEYTYYLL
MAELCLAERLGDVTALFHEMLIQGTTLHKIVHGSLFKFLFRINEDQLLGIVEKSAKDSAA
AADNGCITLLKELCRIQKVSLAEKVLRTFVGAGLVPTTEMYNILVDGYCKIKELQGAFSL
CRQMESHGQLVPNEATYEALLLAVLNNMSIIYWEDVLELFEKNGVSTDALNSGSSATHGF
KYRSSLIPRMFNKLVSKLF

Transcript Sequence

Transcript ID

EER90031
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:52919010:52921032:-1 gene:SORBI_3010G188900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCAACCGAACCGTTTCTGTTGAAGCTATGGAATGGCGCCGCCTCTTCCTCCCTCGCCAC
CACTCCCTCTCCTCCGGCGCCCAGGCCAGCTTCGCTGTCGTCGCCGGTGAGATCTCTGCC
CTCCTCACCGCCCGACGTTTTCGGGTTTCCGTTAACCGGGCGGAGCAGTTCATACGCTCC
AATGCCGTCGGGGCGTCCGGCGTCCCCGAGATGTACCACTTGTTGGCCGCCGCTGGCCCA
CGTGAGCAGTGCCTTTACCTCAGCGGCACGGCCTCCGTGCTGGTCGAGGCATCGGCGCGC
GCGGACCTCCCCGACGGTGCGCTGCTGCTGATCGACCTGCTCATCCACACGCCCATGTTG
CCGCGGCCGTCGGCGATCTCCTGCGGCCACCTCATAACGAAGCTCCTCTCCCTCGGACGC
CGCGCGGATGCGCGCCGCGTGTTGGAGACCCTCGCCGATCGCAAGCGCGACTGGGCGGTC
GCCACGGTTTGGAGAGCCGGGAGAGCGGCCGAGGCCGTCAAGGTGTTCGGCGAAATGGCG
GACACGGCCGCGGCGCCAAAACATTCCAGGTACCGGTACCTTACCAAGAATATGATGAAT
GACTGCCTGATGAAGGGAGATCTGGAGGCTGCTTCAGAGTTGCAGACCCAGATGGTGCTG
GTGGGCTTGAAGGTACCCAAGCAACAGCGGCGAATGCTTCGGATGCTGGAAAAATTCCGG
CAGTGCCCACACAAAATCCCCCGGAATGTGCTCATTGAAATCTGCATCATGGCGGACAGC
GTCGATGGTGCCATCCGTTGGCTCCATCACATGGGCAATGATGACATGGCACCTCCCAAT
GCTCACTCCTACAACCTAGTACTCGCCGGGCTCTGGAAGGCTGGTAGGGGCGGCGATGCT
GTTGAGATGTTCGACGAGATGGCAGACATGTCCCTGGCGCCAAATAATTTCACATATACT
GTCATGATCGATGGCCACTTGAAGAGGCTGAGTCATGTTCTGGCCTCAAAGAAGAACGAG
AGTGGAGATCTGGAGGCTGCGCTCGTGCTGCGGGCTCAGATGGTGCAGGATGGCTTCAAG
CCAGACGAATACACTTACTATTTGCTGATGGCTGAACTCTGCTTGGCTGAACGGCTGGGA
GACGTTACAGCTCTGTTCCATGAGATGCTGATACAAGGGACGACACTACACAAGATCGTT
CATGGAAGCCTGTTCAAGTTCCTCTTCAGAATCAACGAAGATCAGCTACTGGGCATTGTT
GAAAAATCTGCAAAGGATAGTGCTGCTGCAGCGGATAATGGTTGCATTACCTTGTTAAAG
GAGCTTTGCAGGATTCAGAAAGTTTCACTCGCGGAGAAGGTGCTGCGGACATTTGTGGGA
GCAGGGTTGGTCCCGACGACAGAGATGTACAACATTCTCGTTGATGGGTATTGCAAGATC
AAGGAACTCCAAGGGGCATTCTCGTTGTGTCGCCAGATGGAATCACATGGTCAGCTTGTA
CCTAATGAAGCCACCTACGAGGCTCTGCTGCTGGCCGTGCTCAACAACATGAGCATCATC
TATTGGGAGGACGTTCTGGAGTTGTTTGAGAAAAATGGAGTTAGTACTGACGCACTGAAC
TCCGGCAGTTCGGCTACACATGGATTCAAGTATAGGTCTAGTCTGATACCTAGAATGTTT
AACAAACTGGTGAGCAAGCTATTTTAGAATCTGCGAAATGGATATTTCAATTGTAGGTCT
AGAGTAACAGATGCTCGATGGTGCAGCATGTATTCTCCTAAGGACTTGTGGAAGTCAATG
GCAAGCGCCTGCCTTGTTTGCTCGATGACTACATTCAGGGCTAGTTTGAAAACTTAAATC
CCTTAGGGATCTCGGGTTTTTTTCTAGAGTAAACAATTCATAGAGATGTCATTTGAATAA
GCCATTTAATTCTTCATGGAGGGTTTTCTACGCCCTGGGTTTACCTCCCACTTGCTTTCG
AATTAGGCCTCACGGGCTTCCACATTGATTGACCTACCGATGC