Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89894
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:47630161:47632021:-1 gene:SORBI_3010G161000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGAAACTCCCCCGCCTGCTAATGGGGCGATACGAGCTCGACAAGCTGCTCGGCAAG
GGCAGCTTCGCCAAGGTGTACCACGCGCGCAACGTAGACACCAGGGAGGAGGTCGCCATC
AAGATCATGGACAAGGATCACTTGTCCAAGTTAGGCGCCGTGCAGGTGCAGCAGCAGATC
ATGCGCGAGATCGATATCATGCGCCGGGTGCGCCACCCCCACGTCGTGCGCATCCACGAG
GTCATGGCCACCAGGAAGAGCATCTTCGTCGTCATGGAGTTCGTCGGCGGCGGCACTATC
AACGCCCGCCTGGTCCACCGCGCCGGCCGCGGCATCAGCGAGGCCTCGGCGCGCCGCGTC
TTCCAGCAGCTCGTGTCCGCGCTCGACTACTGCCACTCGCTCGGCGTGTACCACCGCGAC
ATCAAGCCCGAAAACATCCTCATCGACGCCACGGGCAACATCAAGGTCGCCGATTTTGGG
CTCTCGGTCGTCCTCGCCGGCGGCATGGCGCAGCGGGAGGCGCTCCTCCACACCGTCTGC
GGGACGCCCATGTTCATCGCGCCCGAGGTGTTCCTGCGCTGCGGCTACGACGGCGCCAAG
GCCGACGTCTGGGCCTGCGGCGTCGTCCTCTTCGCGCTCGTGGCAGGCCGCTACCCCTTC
AATCACAAGGACACCAGCTTGTACCACATGATCCGCCGCTGCGACTACCACTGCCCGCCG
TGGTTCAGTACCGGCCTCGTCGCCCTCGTCCACCGCATCCTCTGCCCCGACCCGGCGCTC
CGTATCACCATACCGCAGATGAAGGAAAATCTTTGGTTCAAGAAGAACTTCAAGGAGATT
CCACGGAGCCTTAGCGAGCCGGAGCTGTGTGACTCTGACTTCGATTCTGACGATGAGTCG
ACAACGTCATCTGTGTCATCATCTACATCGACGGGGGATCTAGCCTCCCTGATGGCGTGC
CCAATGCATACCTCGGTGTCGGCGCCATCACTGACCACACTCCAGAACACCGGTAGCGCC
GCCGTCCAAGCGCAGCCGCTCATGCGCCGCCACAAGAGTCTAAACGCGTTCGACATCATC
GCGTCCTCACCGAGTCTCAACCTGTCCGGGTTATTTGAGGAGCCGAGCGAGCATATGCGG
TTCGTGTCCGCCGCACCCGTGCCCAAGATCATCTCCAAGCTAGAGGAAATCGCTGCGCAT
GTCAGCTTCACGGCGCGCACCAAGGAGTACCAGGTGCGCATCGAGGAGACAAGGAACGGG
AACCAGGGCGTGCTCCTTATCTCTGCCAAGATCTTTGAACTGACGCCTGAGATCGTCATG
GTGAAGGTTTGCAAGAAGGCTGGCGACACCGCTCAGTACTGGCAGTTCTGTAACAATGAG
CTCAAGCCCGGTCTGCGTGGCCTTGTCGATGGACTACCGGAGGACAATGCATGA

Peptide Sequence

PEP ID

EER89894
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:47630161:47632021:-1 gene:SORBI_3010G161000 transcript:EER89894 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGKLPRLLMGRYELDKLLGKGSFAKVYHARNVDTREEVAIKIMDKDHLSKLGAVQVQQQI
MREIDIMRRVRHPHVVRIHEVMATRKSIFVVMEFVGGGTINARLVHRAGRGISEASARRV
FQQLVSALDYCHSLGVYHRDIKPENILIDATGNIKVADFGLSVVLAGGMAQREALLHTVC
GTPMFIAPEVFLRCGYDGAKADVWACGVVLFALVAGRYPFNHKDTSLYHMIRRCDYHCPP
WFSTGLVALVHRILCPDPALRITIPQMKENLWFKKNFKEIPRSLSEPELCDSDFDSDDES
TTSSVSSSTSTGDLASLMACPMHTSVSAPSLTTLQNTGSAAVQAQPLMRRHKSLNAFDII
ASSPSLNLSGLFEEPSEHMRFVSAAPVPKIISKLEEIAAHVSFTARTKEYQVRIEETRNG
NQGVLLISAKIFELTPEIVMVKVCKKAGDTAQYWQFCNNELKPGLRGLVDGLPEDNA

Transcript Sequence

Transcript ID

EER89894
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:47630161:47632021:-1 gene:SORBI_3010G161000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACCAAAATCCCAGCCGTCGACGGCTCACGAGTACGACTCCGTTTCCGTCCCCTCTCCAC
CCCAACATATTAACCTCCTTCCTTTCCTTACGCATCTCAGCCTGTCCTATGTAACAAGAA
TCCTCATACACAGGCTCTCCCTCTCTCTCACGCCGCCGGCCGGCCGGCGTTAGCGGCATG
GGGAAACTCCCCCGCCTGCTAATGGGGCGATACGAGCTCGACAAGCTGCTCGGCAAGGGC
AGCTTCGCCAAGGTGTACCACGCGCGCAACGTAGACACCAGGGAGGAGGTCGCCATCAAG
ATCATGGACAAGGATCACTTGTCCAAGTTAGGCGCCGTGCAGGTGCAGCAGCAGATCATG
CGCGAGATCGATATCATGCGCCGGGTGCGCCACCCCCACGTCGTGCGCATCCACGAGGTC
ATGGCCACCAGGAAGAGCATCTTCGTCGTCATGGAGTTCGTCGGCGGCGGCACTATCAAC
GCCCGCCTGGTCCACCGCGCCGGCCGCGGCATCAGCGAGGCCTCGGCGCGCCGCGTCTTC
CAGCAGCTCGTGTCCGCGCTCGACTACTGCCACTCGCTCGGCGTGTACCACCGCGACATC
AAGCCCGAAAACATCCTCATCGACGCCACGGGCAACATCAAGGTCGCCGATTTTGGGCTC
TCGGTCGTCCTCGCCGGCGGCATGGCGCAGCGGGAGGCGCTCCTCCACACCGTCTGCGGG
ACGCCCATGTTCATCGCGCCCGAGGTGTTCCTGCGCTGCGGCTACGACGGCGCCAAGGCC
GACGTCTGGGCCTGCGGCGTCGTCCTCTTCGCGCTCGTGGCAGGCCGCTACCCCTTCAAT
CACAAGGACACCAGCTTGTACCACATGATCCGCCGCTGCGACTACCACTGCCCGCCGTGG
TTCAGTACCGGCCTCGTCGCCCTCGTCCACCGCATCCTCTGCCCCGACCCGGCGCTCCGT
ATCACCATACCGCAGATGAAGGAAAATCTTTGGTTCAAGAAGAACTTCAAGGAGATTCCA
CGGAGCCTTAGCGAGCCGGAGCTGTGTGACTCTGACTTCGATTCTGACGATGAGTCGACA
ACGTCATCTGTGTCATCATCTACATCGACGGGGGATCTAGCCTCCCTGATGGCGTGCCCA
ATGCATACCTCGGTGTCGGCGCCATCACTGACCACACTCCAGAACACCGGTAGCGCCGCC
GTCCAAGCGCAGCCGCTCATGCGCCGCCACAAGAGTCTAAACGCGTTCGACATCATCGCG
TCCTCACCGAGTCTCAACCTGTCCGGGTTATTTGAGGAGCCGAGCGAGCATATGCGGTTC
GTGTCCGCCGCACCCGTGCCCAAGATCATCTCCAAGCTAGAGGAAATCGCTGCGCATGTC
AGCTTCACGGCGCGCACCAAGGAGTACCAGGTGCGCATCGAGGAGACAAGGAACGGGAAC
CAGGGCGTGCTCCTTATCTCTGCCAAGATCTTTGAACTGACGCCTGAGATCGTCATGGTG
AAGGTTTGCAAGAAGGCTGGCGACACCGCTCAGTACTGGCAGTTCTGTAACAATGAGCTC
AAGCCCGGTCTGCGTGGCCTTGTCGATGGACTACCGGAGGACAATGCATGATCGTGGTAT
CTTTAGTTTTATTTCAACGGTCTATATTAGTAGTATACTAGTTTGTTAGGAGTTTTGACA
ATGTTAATACCGTGATGGTCTGTCATGACACTGTTGTTTATTAGGTTGCTAAAATTTTTT
AGACGTGCTTTCTCCATCCAGTACTAGTGTGTATTCACTTTTCAGTTTTGTTCATCACCG
CATCACTGAAAACAGAACCTATTTTTCAGTGCATTTGGAAAATGCCCCCTTTAGTTTTTC
C