Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89819
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:42829856:42831874:-1 gene:SORBI_3010G148800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGGCGATCTGCGTTGGTGCTGTGGTAGCAGCAGCAACGACTGGGACCTACACGCC
GTGGTGCGCCTCGCCAGCTGCAGTGGTGGCAGCCGCAGCCGCGTCACCTCGCCGTCGCCG
TGGGCCTCGGACGAATCATTCTCCTGCCTGCCCCCGCCGCCGCAGTCACAGAAGGACGAG
GTGACGACGGACGCCGCAGCGTTGCAGCAGCCCCTGATCAGCCCTGCCGTCGACGACCTC
TGCGGCCTGCAGCAGGCCTTCTTGGCCGCCACGCCGCAGCCAAGAAGCGAAGCGCCGCCG
CCGCAGCCGCCGGCGAAACCACGAACTTCCTACCGCAATAACGACGGCGGCGTTGGCGGC
GGACCGACACGATCCAAGAGAAAGAAGAAGAAGAGCCAGGTGACCAGCAAGGAGGTGACG
CGGGTGCCTGTGGGCACGTCTGCGGACCCCTGGGCGTGGCGCAAGTACGGGCAGAAGCCG
ATCAAGGGGTCGCCGTACCCGCGCGGCTACTACCGGTGCAGCACCGACAAGGACTGCAGG
GCGCGGAAGCAGGTGGAGCGCTGCCGCACCGACGCCTCTACCCTCATCGTCAGCTACACC
GGCGAGCACAGCCACCCAGTCCCACTCCACCGCAACGCCCTCGCCGGCACCACGCGCAAC
AAGCCGCAGCCAGCACCGTCCACCTCCCCAGCCGAGCAGCCTCCAGCTGCGTCGCCGATC
GTGGGAGTGGAGTACGAGGAGGACGACACAGTCGCCGCCAGTGTGCTGCTCGAGGATGCC
GAGACGGAGGGAGAGGAAGACGTGCTGTCGTTGTTCCTCGAGCTCGCTCCGAGTCCCAGC
AACGGCAGTGGCTCCAAGGACGTCATGGTATCCACGGAGCTCCACAATGGCAGAGGCTCG
CAGAAAGTCGTGGCACTCTCGAAGCTCCACGAGTTCCGACATCCAGCAACGACGAGCAGC
AGCAGAACGAGCGATGGCTTAGGGGCGGCTCCGGCGGCCATGAACGTGACCCACGAGAAC
TGCCCTTTCTCAGGACTCCGACTCACGACGTAG

Peptide Sequence

PEP ID

EER89819
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:42829856:42831874:-1 gene:SORBI_3010G148800 transcript:EER89819 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEGDLRWCCGSSSNDWDLHAVVRLASCSGGSRSRVTSPSPWASDESFSCLPPPPQSQKDE
VTTDAAALQQPLISPAVDDLCGLQQAFLAATPQPRSEAPPPQPPAKPRTSYRNNDGGVGG
GPTRSKRKKKKSQVTSKEVTRVPVGTSADPWAWRKYGQKPIKGSPYPRGYYRCSTDKDCR
ARKQVERCRTDASTLIVSYTGEHSHPVPLHRNALAGTTRNKPQPAPSTSPAEQPPAASPI
VGVEYEEDDTVAASVLLEDAETEGEEDVLSLFLELAPSPSNGSGSKDVMVSTELHNGRGS
QKVVALSKLHEFRHPATTSSSRTSDGLGAAPAAMNVTHENCPFSGLRLTT

Transcript Sequence

Transcript ID

EER89819
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:42829856:42831874:-1 gene:SORBI_3010G148800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACACTCTATTTATCTTGCTACCACCCTGGATTTCTTCTCTCTCCCACCTCTCTTTGAC
ATTTTCAACCAAAACGCATGCCAGCATCGGCGCCACGCCACCCCGTTGATCCTTTTTAAC
TTTGTTCAAGTTGTCGTACTGTCCGTACAACCCAACCACCCCCTCTCTCCCACCCGCACC
CCCACCCCCAAGCAAGTCAACGTCTTCTAGCTCTCTCCTCCTCCATTAGCCACGAACTCA
AGAAGCTAGGCTATGGAGGGCGATCTGCGTTGGTGCTGTGGTAGCAGCAGCAACGACTGG
GACCTACACGCCGTGGTGCGCCTCGCCAGCTGCAGTGGTGGCAGCCGCAGCCGCGTCACC
TCGCCGTCGCCGTGGGCCTCGGACGAATCATTCTCCTGCCTGCCCCCGCCGCCGCAGTCA
CAGAAGGACGAGGTGACGACGGACGCCGCAGCGTTGCAGCAGCCCCTGATCAGCCCTGCC
GTCGACGACCTCTGCGGCCTGCAGCAGGCCTTCTTGGCCGCCACGCCGCAGCCAAGAAGC
GAAGCGCCGCCGCCGCAGCCGCCGGCGAAACCACGAACTTCCTACCGCAATAACGACGGC
GGCGTTGGCGGCGGACCGACACGATCCAAGAGAAAGAAGAAGAAGAGCCAGGTGACCAGC
AAGGAGGTGACGCGGGTGCCTGTGGGCACGTCTGCGGACCCCTGGGCGTGGCGCAAGTAC
GGGCAGAAGCCGATCAAGGGGTCGCCGTACCCGCGCGGCTACTACCGGTGCAGCACCGAC
AAGGACTGCAGGGCGCGGAAGCAGGTGGAGCGCTGCCGCACCGACGCCTCTACCCTCATC
GTCAGCTACACCGGCGAGCACAGCCACCCAGTCCCACTCCACCGCAACGCCCTCGCCGGC
ACCACGCGCAACAAGCCGCAGCCAGCACCGTCCACCTCCCCAGCCGAGCAGCCTCCAGCT
GCGTCGCCGATCGTGGGAGTGGAGTACGAGGAGGACGACACAGTCGCCGCCAGTGTGCTG
CTCGAGGATGCCGAGACGGAGGGAGAGGAAGACGTGCTGTCGTTGTTCCTCGAGCTCGCT
CCGAGTCCCAGCAACGGCAGTGGCTCCAAGGACGTCATGGTATCCACGGAGCTCCACAAT
GGCAGAGGCTCGCAGAAAGTCGTGGCACTCTCGAAGCTCCACGAGTTCCGACATCCAGCA
ACGACGAGCAGCAGCAGAACGAGCGATGGCTTAGGGGCGGCTCCGGCGGCCATGAACGTG
ACCCACGAGAACTGCCCTTTCTCAGGACTCCGACTCACGACGTAGGAGGCTGTGCAGCGG
TGGCGGCGGCGACCAACTGGGGCTGGCTTGTGCTGCATACATCGATCTCGAAGCACACTG
CACACAGCACAGGCGCACACAGAATGACAGAATGCTGTTAATCGTCTTGGCTTATTGCGG
CAGGATGTACAACCATTCTGAACTCTAGTCAGCATCAAAAGTGTCGCTTTTTACTAGTGT
TATAAGTGCTTTTTAATTTAGCTAGTTTGTGTTAAGTGCATGTATAATGTATAATTATAG
AATAATCAACCTAAAAACCAATTGTTTTTTAGACTTTTGTATTCTTAATTTATTTGTCCT
TTAATCAATAAGATCTTCTTGATAGCCCACTCCTTTTTCTGGAATTAATTTCCTTTGTGC
TATATACAGATACAGGTCAAATTAAGCAGGTGCAGTAAGGAAGTCCAAGTATATATATTT
GGATGATAGCCTACTACACACTACGATATCGGATCTCCGGGGATCAATCCAAAAGCAAGG
AAAACAATGTCTATCAGGGCCGTGTTTAGTTCCGAAATTTTTATTTTTATTTGACAAATA
TTGTCCAATCATG