Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89657
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:16383448:16385836:-1 gene:SORBI_3010G127800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACCACACCAACAGAGGGAGATGGAGAGCAGAGCAAGTGGAAGCAGGGAGGCTAC
AAGACCCTGCCATTCATCATGGCGAACGAGATCTGCGACCGCTTCGCGACGGCCGGCTTC
AACGCCAACCTGATCACGTACCTGACGCAGCAGCTGCACATGCCGCTGGTGGAGGCCTCC
AACACGCTCACCAACTTCGGCGGCACCACCAGCCTGACGGTCGTCCTCGGCGCGTTCGCC
GCCGACGCCTTCATCGGCCGGTTCTGGAGCATCGTCGCGGGCTCCCTCTTCTACCAGCTC
GGCATGCTCGGCCTCGTCATGTCCGCGGTCGTCCCATCGCTCCGCCCCGCGCCGTGCCCG
GCCTCCACCCCGGCCGCGTGCCCGCGCGCCTCCGGTGGCCAGCTCGCCGTGCTGTACCTG
TCCATGCTGTGCGCGTGCCTCGGCACCGGCGGGATCCGGCCCAGCGTCGTCGCGTTCGGC
GCCGACCAGTTCGACGACGACCAGCATGGCGCGGCGGCGGCGGCGGCGTGGGCCGACCGG
AAGCGCCGCTACTTCAACGTCTACTTCTTCACCATGGGGTCGGCGGCACTGCTGGCGCTG
ACGCTGGTCGTGTACATCCAGGACAACGTCGGGTGGGGGTGGGGGTTCGGGATCCCGGCC
ATCAGCATGTTTGTCTCCATCGTCGTGTTCCTGGTGGCGTACCCGCTCTACGTCAGGGCC
AAGCCCGGCGGCAGCCCGTTCACGAGGCTCCTACAGGTCCTCGTCGCCGCGTTCAGGAAG
CGCAACGCCGCCGTGCCTGAGGACACCGGCATGCTGTATCAGGACAAGGAGCTGGATGCG
CTCATCTCTACCAAAGGCAGGCTCCTCCACACTGACAAGCTCAGGTTCTTGGACCGGGCG
GCGATCGTGACGCCGGGCGACGTCTCCGAGTCCGGCGGGCGGCCCAACCCGTGGCGGCTG
TCGACGGTGCACCGCGTGGAGGAGCTCAAGTCCATCGCCCGCATGCTGCCCATCTGGTCG
GCGGGCATCGTCCTGGCCACCGCCGGCTCGCACAACGGCTCCTTCACCATCATGCAGGCG
CGCACCATGGAGCGCCACATCACCGGCAGCCTGGAGATCCCTCCGGCGACGCTGTCCATC
TTCACGACCGGGACCACGCTGGTGAGCATCATCCTGTACGACCGCGTGTTCGTGCCCGTG
GCGCGCTGCGTGACGGGCCGGCCGTCCGGGGTCACCTACTTCCAGCGCATGGGCATCGGG
CTCACCATCGCCGTCTTTGGCGTCGGCGCGGCGGCGCTGGTGGAGACGAGGCGGCGCGGC
GTCGCGGCCGACCACGGGCTCCTGGACACCCCCAAGGCCGTGGTGCCGATGAGCGTGTTC
TGGCTGGTGCCGCAGTACGCCGTCCACGGCGTCGCCGACGCGTTCGCGTCGGTGGGGCAG
ATGGAGTTCCTGTACGACCAGGCGCCCGAGAGCATGCGCAGCACGGCCGTGGCGCTCTTC
TGGCTCTGCGGCTCCTTGGGGAGCTACCTGAGCACGGTGCTCGTGACGGTGGTGCAGCGC
GCCACGAGGAGACACGGCGACTGGCTGCAGGACAACATCAATCGGGGCAGGATCGACAAC
TACTACTGGCTCATCACCTTCATCATGCTGCTCAACTTGGGCCACTACCTCTGCTGCTTC
TACTTCTACACCTTGAAGCCACTGGAGGTGCAAGCCGACGATGAACACAAGGAACGTGAT
GATGACCTCCACCCTGAACAGAAAAATAATGGAATAATGGAGTCCGTCAATATAGCATAA

Peptide Sequence

PEP ID

EER89657
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:16383448:16385836:-1 gene:SORBI_3010G127800 transcript:EER89657 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATTPTEGDGEQSKWKQGGYKTLPFIMANEICDRFATAGFNANLITYLTQQLHMPLVEAS
NTLTNFGGTTSLTVVLGAFAADAFIGRFWSIVAGSLFYQLGMLGLVMSAVVPSLRPAPCP
ASTPAACPRASGGQLAVLYLSMLCACLGTGGIRPSVVAFGADQFDDDQHGAAAAAAWADR
KRRYFNVYFFTMGSAALLALTLVVYIQDNVGWGWGFGIPAISMFVSIVVFLVAYPLYVRA
KPGGSPFTRLLQVLVAAFRKRNAAVPEDTGMLYQDKELDALISTKGRLLHTDKLRFLDRA
AIVTPGDVSESGGRPNPWRLSTVHRVEELKSIARMLPIWSAGIVLATAGSHNGSFTIMQA
RTMERHITGSLEIPPATLSIFTTGTTLVSIILYDRVFVPVARCVTGRPSGVTYFQRMGIG
LTIAVFGVGAAALVETRRRGVAADHGLLDTPKAVVPMSVFWLVPQYAVHGVADAFASVGQ
MEFLYDQAPESMRSTAVALFWLCGSLGSYLSTVLVTVVQRATRRHGDWLQDNINRGRIDN
YYWLITFIMLLNLGHYLCCFYFYTLKPLEVQADDEHKERDDDLHPEQKNNGIMESVNIA

Transcript Sequence

Transcript ID

EER89657
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:16383448:16385836:-1 gene:SORBI_3010G127800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGAGCTGCTGAGTAGATGTAGCTAGGGCCATGTGAAAGCCACGTACACTAGCATATGGTC
GATACCTCAGCTTGAACATCACCAACTCCTTACGTATTGCTTGTCTGCAAGCTGCAGCCA
TGGCGACCACACCAACAGAGGGAGATGGAGAGCAGAGCAAGTGGAAGCAGGGAGGCTACA
AGACCCTGCCATTCATCATGGCGAACGAGATCTGCGACCGCTTCGCGACGGCCGGCTTCA
ACGCCAACCTGATCACGTACCTGACGCAGCAGCTGCACATGCCGCTGGTGGAGGCCTCCA
ACACGCTCACCAACTTCGGCGGCACCACCAGCCTGACGGTCGTCCTCGGCGCGTTCGCCG
CCGACGCCTTCATCGGCCGGTTCTGGAGCATCGTCGCGGGCTCCCTCTTCTACCAGCTCG
GCATGCTCGGCCTCGTCATGTCCGCGGTCGTCCCATCGCTCCGCCCCGCGCCGTGCCCGG
CCTCCACCCCGGCCGCGTGCCCGCGCGCCTCCGGTGGCCAGCTCGCCGTGCTGTACCTGT
CCATGCTGTGCGCGTGCCTCGGCACCGGCGGGATCCGGCCCAGCGTCGTCGCGTTCGGCG
CCGACCAGTTCGACGACGACCAGCATGGCGCGGCGGCGGCGGCGGCGTGGGCCGACCGGA
AGCGCCGCTACTTCAACGTCTACTTCTTCACCATGGGGTCGGCGGCACTGCTGGCGCTGA
CGCTGGTCGTGTACATCCAGGACAACGTCGGGTGGGGGTGGGGGTTCGGGATCCCGGCCA
TCAGCATGTTTGTCTCCATCGTCGTGTTCCTGGTGGCGTACCCGCTCTACGTCAGGGCCA
AGCCCGGCGGCAGCCCGTTCACGAGGCTCCTACAGGTCCTCGTCGCCGCGTTCAGGAAGC
GCAACGCCGCCGTGCCTGAGGACACCGGCATGCTGTATCAGGACAAGGAGCTGGATGCGC
TCATCTCTACCAAAGGCAGGCTCCTCCACACTGACAAGCTCAGGTTCTTGGACCGGGCGG
CGATCGTGACGCCGGGCGACGTCTCCGAGTCCGGCGGGCGGCCCAACCCGTGGCGGCTGT
CGACGGTGCACCGCGTGGAGGAGCTCAAGTCCATCGCCCGCATGCTGCCCATCTGGTCGG
CGGGCATCGTCCTGGCCACCGCCGGCTCGCACAACGGCTCCTTCACCATCATGCAGGCGC
GCACCATGGAGCGCCACATCACCGGCAGCCTGGAGATCCCTCCGGCGACGCTGTCCATCT
TCACGACCGGGACCACGCTGGTGAGCATCATCCTGTACGACCGCGTGTTCGTGCCCGTGG
CGCGCTGCGTGACGGGCCGGCCGTCCGGGGTCACCTACTTCCAGCGCATGGGCATCGGGC
TCACCATCGCCGTCTTTGGCGTCGGCGCGGCGGCGCTGGTGGAGACGAGGCGGCGCGGCG
TCGCGGCCGACCACGGGCTCCTGGACACCCCCAAGGCCGTGGTGCCGATGAGCGTGTTCT
GGCTGGTGCCGCAGTACGCCGTCCACGGCGTCGCCGACGCGTTCGCGTCGGTGGGGCAGA
TGGAGTTCCTGTACGACCAGGCGCCCGAGAGCATGCGCAGCACGGCCGTGGCGCTCTTCT
GGCTCTGCGGCTCCTTGGGGAGCTACCTGAGCACGGTGCTCGTGACGGTGGTGCAGCGCG
CCACGAGGAGACACGGCGACTGGCTGCAGGACAACATCAATCGGGGCAGGATCGACAACT
ACTACTGGCTCATCACCTTCATCATGCTGCTCAACTTGGGCCACTACCTCTGCTGCTTCT
ACTTCTACACCTTGAAGCCACTGGAGGTGCAAGCCGACGATGAACACAAGGAACGTGATG
ATGACCTCCACCCTGAACAGAAAAATAATGGAATAATGGAGTCCGTCAATATAGCATAAT
AACATCATCCATGCATTATTAGTAAATAATTATGCAGGGAGTAAATCCAGTTCAGGGAAA
AGAAACCATGTTCCTTCGTGTTTTCTTTTTCTCACCCAAGTGTGTTCCATCCGAACGTCC
GTGCAAGTATTTTCTGGTCTTTTCTGAGATTCTATCCGAGCAGAGTGTCCGCATACGGTG
ATACGCACGCATATATGTTACCAGTTCATCCGAGCGAGGGTCTTTTTTTCTGCATTTGTT
TCTTTTATAAATGTCAAAAACAAAAGGAGTAATAACACACATATATGCTTG