Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89530
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:9705948:9711955:-1 gene:SORBI_3010G103500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACCGACGGCGGCGAAGACGGGAATGCGGCGGCGCCCAGGGGCCCCGCGCGCCGGAGG
GGGCCCGTGCGGGCCAGCCTCGACGCCGACGAGTTCATCGCGCTGATGCACGGCTCGGAT
CCCGTCAGGGTCGAGCTCACCCGCCTCGAGAACGAGCTCAGGGACAAGGAGAGGGAGCTC
GGGGAGGCGCAGACGGAGATACGCGCGCTGCGCCTGTCGGAGAGGGCGCGGGAGAAGGCC
GTCGAGGAGCTTACAGATGAATTGGAGAAGATGGCTGAGAAACTCAAGCTGACAGAATCT
CTCCTCGAAAGCAAAAATCTTGAAGTTAAAAAGATAAATGATGAGAAAAAAGCTGCATTG
GCTGCCCAGTTTGCAGCAGAAGCAACTTTGCGAAGAGTACATGCAGCCCAGAAAGATGAT
GACATGCCACCAATTGAAGCCATTCTTGCACCACTTGAAGCTGAGCTAAAGCTTTCTCGC
CAGGAGATTGCAAAGCTCCAGGATGACAACAGAGCTTTGGATCGTCTAACAAAACAAAAG
GAAGCAGCTCTGCTAGAAGCAGAGAGGACCGTGCAAATTGCTATGGCAAAAGCTGCTATG
GTTGACGATTTGCAAAACAAGAACCAAGAGTTGATCAAGCAAATTGAGATTTGCCATGAA
GAAAATAAAATCTTAGACAAGCTGCATCGCCAAAAGATTGCAGAAGTTGAAAAGCTTAGC
CAAACTGTGAGAGAGTTGGAAGAGGCTGTTCTTCAAGGTGGTGCAACAGCTAATGTTGTT
CGAGATTACCAGCGCAGATTTCAAGAAATAAATGAAGAAAAGAGAACACTTGACCGTGAA
CTTGCACGTGCAAAAGTTACAGCAAACAGGGTTGCTTCTGTTGTTGCCAATGAGTGGAAA
GATTCTAATGACAAGGTGATGCCAGTTAAACAGTGGCTTGAAGAGCGTAGATTCTTGCAG
GGGGAGATGCAACAACTTCGTGACAAGCTTGCTGTTGCAGAACGTACAGCACGATCTGAA
GCTCAACTGAAGGAAAAATATCAGTTACGTCTGAAAGTACTAGAAGATGGACTAAGGGGG
CCACCAAGTGGCTCTAGTCGTCCACCTACTGAAGGAAAGAGCTTTAGCAATGGCCCTTCT
CGCCGGTTATCACTTGGTGGAGCTGATAACATATCAAAGTTGTCTCCAAATGGCTTATTG
TCAAGGAGATCTCCTTCTTTTCATTCAAGATCGTCTCTTTCGTCAAACAGCAGCTTGGTC
CTGAAGCATGCTAAAGGCACTTCAAAGTCATTTGATGGCGGAACTAGGTCACTAGATAGG
GGAAAGGTCCATGGAAATGGAGCTCATTTACTCAACAGATCTACAGATGCTGTTAGAGAT
AAAGAGACTAATGATAGTTGGAAGGGCGATATGGATGAGAGAACTAATGATAGTGCAGTC
AGCAATGCAGATGAGAAAAGTAACGAAGCCACAAATAATAATTCAGCTGAGACAGTTTCT
GGTTTCCTATATGATATGCTGCAAAAAGAGGTAATTTCTTTGAGAAAGACATGCCATGAA
AAGGATCAGATTCTAAAAGATAAAGATGATGCTATTGAGATGTTAGCAAAGAAAGTAGAC
ACCTTAACCAAAGCAATGGAAGTGGAGGCTAAAAAGGTCAGACGAGAGGTTGCAGCCATG
GAGAAAGAAGTTGCAGCAATGCGTGCCAGTAAAGAACAAGAAATCAGAGCCAAGCGGCTT
GGTACAAAAGGCTCTGGTAGTTCACAGCTGCTTCCTGGAAGAAACGCACCACGAAGTGGG
TCGATGCGCAACTTCCAGTGA

Peptide Sequence

PEP ID

EER89530
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:9705948:9711955:-1 gene:SORBI_3010G103500 transcript:EER89530 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTDGGEDGNAAAPRGPARRRGPVRASLDADEFIALMHGSDPVRVELTRLENELRDKEREL
GEAQTEIRALRLSERAREKAVEELTDELEKMAEKLKLTESLLESKNLEVKKINDEKKAAL
AAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLSRQEIAKLQDDNRALDRLTKQK
EAALLEAERTVQIAMAKAAMVDDLQNKNQELIKQIEICHEENKILDKLHRQKIAEVEKLS
QTVRELEEAVLQGGATANVVRDYQRRFQEINEEKRTLDRELARAKVTANRVASVVANEWK
DSNDKVMPVKQWLEERRFLQGEMQQLRDKLAVAERTARSEAQLKEKYQLRLKVLEDGLRG
PPSGSSRPPTEGKSFSNGPSRRLSLGGADNISKLSPNGLLSRRSPSFHSRSSLSSNSSLV
LKHAKGTSKSFDGGTRSLDRGKVHGNGAHLLNRSTDAVRDKETNDSWKGDMDERTNDSAV
SNADEKSNEATNNNSAETVSGFLYDMLQKEVISLRKTCHEKDQILKDKDDAIEMLAKKVD
TLTKAMEVEAKKVRREVAAMEKEVAAMRASKEQEIRAKRLGTKGSGSSQLLPGRNAPRSG
SMRNFQ

Transcript Sequence

Transcript ID

EER89530
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:9705948:9711955:-1 gene:SORBI_3010G103500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAACCGCAGTCCGCAGCTGCTACTGCTAGACCAACACGCACTCTCTCGCACACAGCCGC
GGGGGGCGGGGCACAGTGACGCGGGCGGAGGAGCGGGCGCCGAGCTAGGGTTTCCCTGAT
CCGGCGGGGCCGGGTTGCGGGCGGAAACCCTTTGCTGGATTCCGGCGCCGGAGGCGCAGT
GCCGGTGCCACCCCGAGGCCGGCGGGTTGGGGAGCTGGGGGCGCGCGGCGACGCGGGCTC
AGATCTGGTATGACCGACGGCGGCGAAGACGGGAATGCGGCGGCGCCCAGGGGCCCCGCG
CGCCGGAGGGGGCCCGTGCGGGCCAGCCTCGACGCCGACGAGTTCATCGCGCTGATGCAC
GGCTCGGATCCCGTCAGGGTCGAGCTCACCCGCCTCGAGAACGAGCTCAGGGACAAGGAG
AGGGAGCTCGGGGAGGCGCAGACGGAGATACGCGCGCTGCGCCTGTCGGAGAGGGCGCGG
GAGAAGGCCGTCGAGGAGCTTACAGATGAATTGGAGAAGATGGCTGAGAAACTCAAGCTG
ACAGAATCTCTCCTCGAAAGCAAAAATCTTGAAGTTAAAAAGATAAATGATGAGAAAAAA
GCTGCATTGGCTGCCCAGTTTGCAGCAGAAGCAACTTTGCGAAGAGTACATGCAGCCCAG
AAAGATGATGACATGCCACCAATTGAAGCCATTCTTGCACCACTTGAAGCTGAGCTAAAG
CTTTCTCGCCAGGAGATTGCAAAGCTCCAGGATGACAACAGAGCTTTGGATCGTCTAACA
AAACAAAAGGAAGCAGCTCTGCTAGAAGCAGAGAGGACCGTGCAAATTGCTATGGCAAAA
GCTGCTATGGTTGACGATTTGCAAAACAAGAACCAAGAGTTGATCAAGCAAATTGAGATT
TGCCATGAAGAAAATAAAATCTTAGACAAGCTGCATCGCCAAAAGATTGCAGAAGTTGAA
AAGCTTAGCCAAACTGTGAGAGAGTTGGAAGAGGCTGTTCTTCAAGGTGGTGCAACAGCT
AATGTTGTTCGAGATTACCAGCGCAGATTTCAAGAAATAAATGAAGAAAAGAGAACACTT
GACCGTGAACTTGCACGTGCAAAAGTTACAGCAAACAGGGTTGCTTCTGTTGTTGCCAAT
GAGTGGAAAGATTCTAATGACAAGGTGATGCCAGTTAAACAGTGGCTTGAAGAGCGTAGA
TTCTTGCAGGGGGAGATGCAACAACTTCGTGACAAGCTTGCTGTTGCAGAACGTACAGCA
CGATCTGAAGCTCAACTGAAGGAAAAATATCAGTTACGTCTGAAAGTACTAGAAGATGGA
CTAAGGGGGCCACCAAGTGGCTCTAGTCGTCCACCTACTGAAGGAAAGAGCTTTAGCAAT
GGCCCTTCTCGCCGGTTATCACTTGGTGGAGCTGATAACATATCAAAGTTGTCTCCAAAT
GGCTTATTGTCAAGGAGATCTCCTTCTTTTCATTCAAGATCGTCTCTTTCGTCAAACAGC
AGCTTGGTCCTGAAGCATGCTAAAGGCACTTCAAAGTCATTTGATGGCGGAACTAGGTCA
CTAGATAGGGGAAAGGTCCATGGAAATGGAGCTCATTTACTCAACAGATCTACAGATGCT
GTTAGAGATAAAGAGACTAATGATAGTTGGAAGGGCGATATGGATGAGAGAACTAATGAT
AGTGCAGTCAGCAATGCAGATGAGAAAAGTAACGAAGCCACAAATAATAATTCAGCTGAG
ACAGTTTCTGGTTTCCTATATGATATGCTGCAAAAAGAGGTAATTTCTTTGAGAAAGACA
TGCCATGAAAAGGATCAGATTCTAAAAGATAAAGATGATGCTATTGAGATGTTAGCAAAG
AAAGTAGACACCTTAACCAAAGCAATGGAAGTGGAGGCTAAAAAGGTCAGACGAGAGGTT
GCAGCCATGGAGAAAGAAGTTGCAGCAATGCGTGCCAGTAAAGAACAAGAAATCAGAGCC
AAGCGGCTTGGTACAAAAGGCTCTGGTAGTTCACAGCTGCTTCCTGGAAGAAACGCACCA
CGAAGTGGGTCGATGCGCAACTTCCAGTGATGGCAGCACTAACACCAAGCAGCATTCTTG
GATAGATCCTTTTCTGTTCCACCATTTGTTCCATTCCTATCCTATTAATTTTGTGGCTAA
AATCATAGCACAGTGAGATGACCCAACAATACCTAGATCAGGGTAAGAGTAGGCTCGGAT
CTTATGAGACCATTGTGAGAGTGAAACTGAGCCTATGTGTCTAACCTTGTGGCGCGCCCT
CGTTTCTTTTTATTAGTCCAGGCAGTGCACCTGATGCTTGTATAGGCTGGGGATCTTCGC
ATGCCCAATCTGTAATGTAGCTTGAGTGCTCAGTTACACAGGACACCCGTTGCCCAGGTT
GTGAATATTGTATCCTCTCACATGCTTGTTTGCGCTGCTCTGTTTGCCCTGTGTTTGGGT
TGGAATTTTTTAACATGGCTTCTGGCTTGTCTAAGTTCTGTTG