Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89424
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:7375444:7377799:-1 gene:SORBI_3010G085900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAACCCCCGCCCGCACTCCCCTGGATCTCCCCACTGCAGTACCGAAGCCCCGCCCGC
GGCGCGCCGCCCTCCCCACCGCCTCCCGCGCCTCCACCCCCTCCCACCCGGCCGCCGCGG
TACCTCCACCACCCAGAACTCGCGCGCCTCATCGCGTCCTCCCCGTCCGCGCAGCGCGCG
CTCGACCTCTTCAACGCGGCCTCCTCCCAGCGCGGCTTCTCCCACACGCCGGCCACCTTC
TCGGCGCTCCTCGTCCGCCTCGCGCGCGCGCGGCTCCCGCGTGCCGCCGCCGCCGTGCTC
CGCCGCACCGCCTCCGAGCCCTGCCGGTTCCAGGAGCCGCAGTTCCTGCCGCTCGTCCGC
CTCCTCCCGCCCGACCACGCGCTCGCGCTCCTCCGCTTCCTGCCCGCGCTGCTCCGCACG
AGCCGCGTCTCACACAAGGCGCTCGCCGTCTGCCTCGACCGCCTCGTCTCCTCCCGCGGC
TGCCACGGCGTCCTCGATGAACTCCTATCCGACCTGCGTGACCCTCGGAACAAGTACCTT
CCAAGGCCTAACACATGCGTCTACAACATCCTCATCAAGCACTTTGTCAGAATCGGCGAA
TTGGAGACCGCCTTCAAAGTGCTCGACGAAATGCGCGAGTACACTTGCGCTGACGTGAAG
CCAAACTTGGTCACCTATTCAACATTGATCGCTGGGCTCTGCCGTGGGGGTAAGATGATG
GAAGCGTTTGAGCTATTTGAGGAGATGATCGAGAAGGACCGCATTGTGCCAGATCAGCTG
TTGTACAATGTGATCATCGATGGATTCTGTAGACTGGGGCAGGTGGATAAGGCTCGTGCA
ATCTTTGGATTTATGAAGAAGAACGATTGTGAGCCCAATGCCTTCAATTATGCAACGCTG
ATTAATGGGCATTGTAAGAAAGCGGACATTGAGGCAGCGAGATCTGTGTTTGAGGAGATG
AGGAATGCTGGCGTGGAGCCAGATGCTGTGAGCTACACTGCACTGATCGGCTGCCTTTGT
AGACATGGAAGTGTGGATGAGGCCATCAATCTTGTTTTGGAGATGAAGCAGAAGGGATGT
AGGGCTGATGTCGTCACATACAATCTGGTGATTGAGGGGCTGTGTAGAGATGGGCGGACC
GTGGAAGCGATGGACCTGCTTGAGAGCGTGCCGCTGGAAGGAGTTAAGTTGAATGTCGCG
AGCTATCGGATCTTGATGAACTGCTTGTGCTCCCGTGGGGAGATGGACAAGGCAGTTGGC
TTGCTGGGATTGATGCTTGGACGAGGGTTTCTACCTCACTATGCAGCGTCAAACAACCTA
TTGATTGGCCTATGTGATGCTGGGCGCATAGCAGATGCTACGATGGCATTGTATGGGTTA
GCTGATGCAGGCTTCATGCCAGAGGCTAGATGTTGGGAGAGGCTTGTGGAGACTATGTGC
CGGGAGAGAAAGCAAAGGAGATCCACTGAGCTACTAGATGTCTTGGTTGGTGTAGGTTGA

Peptide Sequence

PEP ID

EER89424
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:7375444:7377799:-1 gene:SORBI_3010G085900 transcript:EER89424 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKPPPALPWISPLQYRSPARGAPPSPPPPAPPPPPTRPPRYLHHPELARLIASSPSAQRA
LDLFNAASSQRGFSHTPATFSALLVRLARARLPRAAAAVLRRTASEPCRFQEPQFLPLVR
LLPPDHALALLRFLPALLRTSRVSHKALAVCLDRLVSSRGCHGVLDELLSDLRDPRNKYL
PRPNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMM
EAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATL
INGHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGC
RADVVTYNLVIEGLCRDGRTVEAMDLLESVPLEGVKLNVASYRILMNCLCSRGEMDKAVG
LLGLMLGRGFLPHYAASNNLLIGLCDAGRIADATMALYGLADAGFMPEARCWERLVETMC
RERKQRRSTELLDVLVGVG

Transcript Sequence

Transcript ID

EER89424
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:7375444:7377799:-1 gene:SORBI_3010G085900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCCCCAAAACAGTAGACAGCGATCGGCATCTTCTTCAACCTCCGTCGGCTGATGCTCCT
CCACTTCACCGCTTCCTCACACGACCTGAGCGGGTAATTGCGCCGGCGGCTATCTGGACT
GGAGCGGCCGCCTCCACCTCCGCCTCCACCTGAGCGGCTCACGGTTACCCGACCTGTCCC
ACCCCAGCTCCTCGCCGCGAATGCTGAGACGGCGGAAACCGACCGCGCTTCCGTACGCCA
CCGCCGATCGACAATGAAACCCCCGCCCGCACTCCCCTGGATCTCCCCACTGCAGTACCG
AAGCCCCGCCCGCGGCGCGCCGCCCTCCCCACCGCCTCCCGCGCCTCCACCCCCTCCCAC
CCGGCCGCCGCGGTACCTCCACCACCCAGAACTCGCGCGCCTCATCGCGTCCTCCCCGTC
CGCGCAGCGCGCGCTCGACCTCTTCAACGCGGCCTCCTCCCAGCGCGGCTTCTCCCACAC
GCCGGCCACCTTCTCGGCGCTCCTCGTCCGCCTCGCGCGCGCGCGGCTCCCGCGTGCCGC
CGCCGCCGTGCTCCGCCGCACCGCCTCCGAGCCCTGCCGGTTCCAGGAGCCGCAGTTCCT
GCCGCTCGTCCGCCTCCTCCCGCCCGACCACGCGCTCGCGCTCCTCCGCTTCCTGCCCGC
GCTGCTCCGCACGAGCCGCGTCTCACACAAGGCGCTCGCCGTCTGCCTCGACCGCCTCGT
CTCCTCCCGCGGCTGCCACGGCGTCCTCGATGAACTCCTATCCGACCTGCGTGACCCTCG
GAACAAGTACCTTCCAAGGCCTAACACATGCGTCTACAACATCCTCATCAAGCACTTTGT
CAGAATCGGCGAATTGGAGACCGCCTTCAAAGTGCTCGACGAAATGCGCGAGTACACTTG
CGCTGACGTGAAGCCAAACTTGGTCACCTATTCAACATTGATCGCTGGGCTCTGCCGTGG
GGGTAAGATGATGGAAGCGTTTGAGCTATTTGAGGAGATGATCGAGAAGGACCGCATTGT
GCCAGATCAGCTGTTGTACAATGTGATCATCGATGGATTCTGTAGACTGGGGCAGGTGGA
TAAGGCTCGTGCAATCTTTGGATTTATGAAGAAGAACGATTGTGAGCCCAATGCCTTCAA
TTATGCAACGCTGATTAATGGGCATTGTAAGAAAGCGGACATTGAGGCAGCGAGATCTGT
GTTTGAGGAGATGAGGAATGCTGGCGTGGAGCCAGATGCTGTGAGCTACACTGCACTGAT
CGGCTGCCTTTGTAGACATGGAAGTGTGGATGAGGCCATCAATCTTGTTTTGGAGATGAA
GCAGAAGGGATGTAGGGCTGATGTCGTCACATACAATCTGGTGATTGAGGGGCTGTGTAG
AGATGGGCGGACCGTGGAAGCGATGGACCTGCTTGAGAGCGTGCCGCTGGAAGGAGTTAA
GTTGAATGTCGCGAGCTATCGGATCTTGATGAACTGCTTGTGCTCCCGTGGGGAGATGGA
CAAGGCAGTTGGCTTGCTGGGATTGATGCTTGGACGAGGGTTTCTACCTCACTATGCAGC
GTCAAACAACCTATTGATTGGCCTATGTGATGCTGGGCGCATAGCAGATGCTACGATGGC
ATTGTATGGGTTAGCTGATGCAGGCTTCATGCCAGAGGCTAGATGTTGGGAGAGGCTTGT
GGAGACTATGTGCCGGGAGAGAAAGCAAAGGAGATCCACTGAGCTACTAGATGTCTTGGT
TGGTGTAGGTTGAGGTCTTGAGGAAAGGAACTGGAACTCACAGCAGTGTATCTGAACCCA
TTTGCACTAAGGATTGAATTGATGTTTATCACAATGAAGAGAAGACTGCCAGGCCCTACT
GGAGACAGCAACCAACAGGGGCACAGGGCCTGACACAAACTTCTCTTTCAGAACAAGAGT
TGTCATTGGAGATGTAGTCCAGGATGAGGTGCCGCCGTAGGATCTGGCAAACAGACTTCT
GCTGGGGAAGGTGATCTTCAGCAGAACCATTTTTGCTACAAAAAAGCTTCATCAGGGCTG
GCGATCGAGCCGGTTTGGACTGAAACCACAACTACCAAAAGAGTCCTATTTTAATAGGAA
GTGAGCGTGACTTCTTTTGACAGTTAAAATATTTCCCTGTTTTTTTTCTACTACTATCTG
GCCCTAGTGCTAATTGTAATTGGATCCTTTTTTGAGGTAACACAGGCATGGTCCATGATT
GCTTCTTGGTTTAAATAGGGGGGAAGTTGTGGTTTAATTTCTGGTGTATGTAATGTTATT
TTCTAAGCATGTAGCTTATTAGTGCAGCAACTACTTGTAGTTCCTCAACTCTCGTTACAT
TCTCCCTTGAAATTAA