Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89219
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:3297835:3301835:-1 gene:SORBI_3010G042700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCGCCAGGGCCCGCGCCGCCTCCCTGCCGGAGAACGCAACCGTCGCCTCGCCGAG
GAGGTGCTCTACCTGCACTCCCTCTGGCGTCGCGGAGGCCCCGCCCCAGCCCCGTTCCAG
TCGCGCTCCGACCGACGCGAACAACGCGAACGCAGCGGGCTCATCAGCGCCCTCCGCCAC
GAAGAACGCGACCGCCTCAGGCTCGACCGCGCCCACCGCCGCAAAGAACGCAAGCGACGG
AAGATCGACCGCGCCGCCGCCGAGCCGGCCTTCGCGCCGTCTCCGCCCACCTCTTCGCCG
GGAACCTTGGCGGAAGCCGCCGGCGCCTCAACCCCTTCCACCGCGAATCCGCCGCCTCCG
ACGACTCCCCCCGGCTCGCTCGCGCAGCGGGAGACCGTGCGCTCCTCCGTGGAGTTCACC
AACCGCGACCCCGTCTATATCGACGGGGAGGGGTGCGATTTGGACGGCGATAAGGCGGAG
GAAGAGGAGGCGGCGCGCTACTTCACCGGGCTGTTCGAGCGGGACGCGTGGCTGCGAGGC
CACTACACGGATAGGTGGCGCAAGGGGCGGTTCCAGTGCATGGTGTGCGCCGCGGGGGGC
GGGAAGAAGGTGGGGAGGGCGGTGCGGCGGTTCCGGGGCTGCTTGGCGCTCGTGCACCAC
GCGCGCGACGCCTCGCGGCGGCGGTCGCTGTGCGGGAGGTGCGGGAGGTACGGGAGGCCC
GGGGCGCACCGCGCGCTCGCCGCTGTCGTCTGCCGAATGCTCAGGTGGGATCTCGAGAAA
CTGGCCCTGCCTCGCGTCGTGATCGATCCCCGGGCCACGGCCGGTGTTCAACATGCCAAG
GAGAATGATGATACTGGGGAGAACAATGGCTACTCGACTGATGATGATAGCTATTCGATT
CATGAGGATGAAGAGAGTGATGACGAGGAGAGTGTGGATGAAGAGGAGGACATTGAGAGA
GGGATGCCAGACCCAGGTACTGATGGTTTTGAAGAGGACAGTGAAATAGAGAGCAATGAA
GAGTATGCTGTAAAGGAGGATCGTGAGAACAGGATGGAAGACTTGAGTACTGATGGTGAT
GAAGATGCTGATGAACTAGAGAGAAGTAAAGAGGCTGGTCAAAAGAAGGATGCTGATACA
GGAGCAGAAGGCTCTAAAATTACTGATGGTGATACAGAGGCTATTGAACTAGATAACAGT
GAGAAGATTCCTGAAAAGGAAGCTGCTAATTCTATTGCAAGAAAACGGGATTTGAAGATA
AGAGATCGCCTGTTGAGTCTCACCCATGCAAAACCCGTGGGCACAGGACCAAAGGAAATG
GAAGTCCAGAAAAGGAGTAGTGTGCCAAAACACAAGGAGGTTTCGACACCAGGCAGCAAA
TTTAATGAAGGCAGTGACAAAGCCAAACGAAAGGCATCAGCTTTGTCGTATCAAGGCCAA
TCATGCGCATCTGGTGTTGTGAAGAAGGTGAAAGTGAACCAGCAACCCAGCAACAAAGGG
AAGCAGAGCAAAACTAGTGAAATCGGAGCAAGTGCTCGGAAAGCTAAGCGACCCGCTGTG
GCTGCAAGAAAGGCGAAGTTACTAGCCAAGAAGCAACTAGCCAAGAAACACAGCCATGAA
ACGCAAGGTGGATGTCTCAATTCCTGA

Peptide Sequence

PEP ID

EER89219
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:3297835:3301835:-1 gene:SORBI_3010G042700 transcript:EER89219 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPRQGPRRLPAGERNRRLAEEVLYLHSLWRRGGPAPAPFQSRSDRREQRERSGLISALRH
EERDRLRLDRAHRRKERKRRKIDRAAAEPAFAPSPPTSSPGTLAEAAGASTPSTANPPPP
TTPPGSLAQRETVRSSVEFTNRDPVYIDGEGCDLDGDKAEEEEAARYFTGLFERDAWLRG
HYTDRWRKGRFQCMVCAAGGGKKVGRAVRRFRGCLALVHHARDASRRRSLCGRCGRYGRP
GAHRALAAVVCRMLRWDLEKLALPRVVIDPRATAGVQHAKENDDTGENNGYSTDDDSYSI
HEDEESDDEESVDEEEDIERGMPDPGTDGFEEDSEIESNEEYAVKEDRENRMEDLSTDGD
EDADELERSKEAGQKKDADTGAEGSKITDGDTEAIELDNSEKIPEKEAANSIARKRDLKI
RDRLLSLTHAKPVGTGPKEMEVQKRSSVPKHKEVSTPGSKFNEGSDKAKRKASALSYQGQ
SCASGVVKKVKVNQQPSNKGKQSKTSEIGASARKAKRPAVAARKAKLLAKKQLAKKHSHE
TQGGCLNS

Transcript Sequence

Transcript ID

EER89219
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:3297835:3301835:-1 gene:SORBI_3010G042700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAAAAACGAAAATACTACAATGTCAAAATCCAAAAAAAAAATAAAAACTGAACACGACAA
ATCTTTTGAGCCTAGTTAGTCCATGATCAGATAAAATTTATCAAATACAAACGAAAATAC
TGCAGCAGCCAAAACTAAAAAAATTTCATGAGGCCTAAAATAATTTACGTGTTCAGAGTT
AAATTTCAAAAAACCTACGAACAGGAGGTTAAATATCAAAAAAATTCCAAAGGAAGCCCC
CAAACCAACAATCTCTTCTGTTTCCGGTGCCGACCACGGCGCCGCAGGACAGCGGAGGGC
TCCGCCGCGGGCGGGCGGCGGTTCCAAGGTCGTGGAGAAGATCCCTACGCTTCCCCTAGC
TTCACTCCTTTTGCTCTGCCGGCGGCACTTGAACAGGAAGCGTCGTCGCCAGCTCGCCGC
CGCGGCAACCGAACGAACACCATCGCTTCGCCGCCTGCTCGCGCCTCTTCCAATTCCAAG
CAAAACAAACAAACCAGCAATGCCGCGCCAGGGCCCGCGCCGCCTCCCTGCCGGAGAACG
CAACCGTCGCCTCGCCGAGGAGGTGCTCTACCTGCACTCCCTCTGGCGTCGCGGAGGCCC
CGCCCCAGCCCCGTTCCAGTCGCGCTCCGACCGACGCGAACAACGCGAACGCAGCGGGCT
CATCAGCGCCCTCCGCCACGAAGAACGCGACCGCCTCAGGCTCGACCGCGCCCACCGCCG
CAAAGAACGCAAGCGACGGAAGATCGACCGCGCCGCCGCCGAGCCGGCCTTCGCGCCGTC
TCCGCCCACCTCTTCGCCGGGAACCTTGGCGGAAGCCGCCGGCGCCTCAACCCCTTCCAC
CGCGAATCCGCCGCCTCCGACGACTCCCCCCGGCTCGCTCGCGCAGCGGGAGACCGTGCG
CTCCTCCGTGGAGTTCACCAACCGCGACCCCGTCTATATCGACGGGGAGGGGTGCGATTT
GGACGGCGATAAGGCGGAGGAAGAGGAGGCGGCGCGCTACTTCACCGGGCTGTTCGAGCG
GGACGCGTGGCTGCGAGGCCACTACACGGATAGGTGGCGCAAGGGGCGGTTCCAGTGCAT
GGTGTGCGCCGCGGGGGGCGGGAAGAAGGTGGGGAGGGCGGTGCGGCGGTTCCGGGGCTG
CTTGGCGCTCGTGCACCACGCGCGCGACGCCTCGCGGCGGCGGTCGCTGTGCGGGAGGTG
CGGGAGGTACGGGAGGCCCGGGGCGCACCGCGCGCTCGCCGCTGTCGTCTGCCGAATGCT
CAGGTGGGATCTCGAGAAACTGGCCCTGCCTCGCGTCGTGATCGATCCCCGGGCCACGGC
CGGTGTTCAACATGCCAAGGAGAATGATGATACTGGGGAGAACAATGGCTACTCGACTGA
TGATGATAGCTATTCGATTCATGAGGATGAAGAGAGTGATGACGAGGAGAGTGTGGATGA
AGAGGAGGACATTGAGAGAGGGATGCCAGACCCAGGTACTGATGGTTTTGAAGAGGACAG
TGAAATAGAGAGCAATGAAGAGTATGCTGTAAAGGAGGATCGTGAGAACAGGATGGAAGA
CTTGAGTACTGATGGTGATGAAGATGCTGATGAACTAGAGAGAAGTAAAGAGGCTGGTCA
AAAGAAGGATGCTGATACAGGAGCAGAAGGCTCTAAAATTACTGATGGTGATACAGAGGC
TATTGAACTAGATAACAGTGAGAAGATTCCTGAAAAGGAAGCTGCTAATTCTATTGCAAG
AAAACGGGATTTGAAGATAAGAGATCGCCTGTTGAGTCTCACCCATGCAAAACCCGTGGG
CACAGGACCAAAGGAAATGGAAGTCCAGAAAAGGAGTAGTGTGCCAAAACACAAGGAGGT
TTCGACACCAGGCAGCAAATTTAATGAAGGCAGTGACAAAGCCAAACGAAAGGCATCAGC
TTTGTCGTATCAAGGCCAATCATGCGCATCTGGTGTTGTGAAGAAGGTGAAAGTGAACCA
GCAACCCAGCAACAAAGGGAAGCAGAGCAAAACTAGTGAAATCGGAGCAAGTGCTCGGAA
AGCTAAGCGACCCGCTGTGGCTGCAAGAAAGGCGAAGTTACTAGCCAAGAAGCAACTAGC
CAAGAAACACAGCCATGAAACGCAAGGTGGATGTCTCAATTCCTGAGAATACAGACAGGA
GCAGAAGTCCAAGGAAGTAGTTATCCATTTCGTTGGTTGTTTGCCCCTGTCAAATTGTAA
CATGGGTTTCAGTGGATGACCCTGGTCAGATGATCATGTTACTGCAGAGAAGCAATGCGC
CCCCTCCAACAGGTTCTTGAATTAGATGTCAAGTGTTATCATCCTCTATTCCAGTTGTGT
CGCTAGTCAGTGATATAGATATAGAGTGATATTATTTAAACGGCTCTCTAAATGTTTAGA
GATAGAGTCTAAGAAAGACTCTCGAAGATCCTCAGCTAACGACTAAGAAGGTGTTTGGCA
AAGCTCCTCTTGAGGAACTGGAGACGTCAAAACAGCTTTGGCTTCTTTGTTTTTTTTAAC
TGAAAAATAGCTCTTATTATAAAATATTTGGTA