Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89117
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:1589218:1593384:-1 gene:SORBI_3010G019600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCTCATTCCCAGCTCTCCTCCATCGCCGCAACCACTGGCCTGTACTTGCTTTCA
GCTCTCAGCGTAGCCTTGCTGGCGATGACCCTCTACATCATGGGTGTTCTTGTGTCCTTC
GCTGTCCTCTGCATCAAAGAGTTTGCTTGGAGTAGGAGAGCTCGTGATCGACCACCGCTC
GTCGGGACTATGTTCCGGATGCTCAAGAATTTCGACAGGCTCTTCGATGAGCATGTGGAG
TACGCGCTTGCCCATCGGACCAGCAGGCTGCTCTTTCCTGGGCACAGTGAGCTCTTGACC
TCTGATCCACGAGTCATTGAACATATCCTCAAGAACAGATTCAGTAAATACAGTAAGGGC
GACTTCAACACTCAAATCACGAAGGATCTCTTTGGAAATGGCATTTTCACAACCGACGGG
GAGAAGTGGCGGCACCAGAGGAAGTTAGCGAGCCATGAGTTCTCAACCAGCGTCCTTCGC
AACTTCAGCAGTGGTGTGTTCAGAACAAATGCTGCAAAACTAACAGAGAAGATCTCATCG
GCAGCAGCCAATAAAACTTCCATAGACATGCAGGATCTTTTGATGAAAACAACTATGGAT
TCAATCTTCAAAGTGGGATTCGGTTTTGAGCTGAACACACTATCTGGTTCAGATGAACCT
AGCATTCAATTCAGCAAGGCCTTCGATGATGCAAACTTTCTTGTTTTCCACCGATATGTT
GATATATTCTGGAAACTGAAAAGGTTTCTTAGTATTGGCTCAGAAGCTAAACTGAAGAGG
GACATTGAGATCATCGACAATTTTATAATTCAGTTGATCCATCAAAAGAGAGAGAAAATG
AAGAATGGACGTGACCATAAGGCCAGAGAGGACATACTAACAAGATTTATATTAGCAAGT
GAAGAGGACCCTGAAACGATGAATGACCGTTACCTGCGTGACATAGTCCTCAACTTCCTA
ATCGCCGGGAAAGACACCACAGCAAATACCCTGACCTGGTTCTTCTACATGCTATGCAAG
AATCCCGTGGTGCAGGATAAGGTTGCCCTTGAAATTAATGAGTCACTTGAGTGGGCCAAG
GAAGATAACAGCATTGAGAACTTCACTGCAAGATTGAATGAAAGTGCTATTGAAAACATG
CATTATCTCCATGGTGCGATCACTGAGACACTACGTCTGTATCCTGCTGTTGCAGTGGAT
GGTAAGATGGCAGATGAAGATGATACCCTGCCTAATGGCTATAGAGTGGTTAAAGGAGAT
GGAGTGAACTACATGATTTATGCCATGGGAAGGATGACATACCTCTGGGGCAAGGATGCT
GAAGAATTCAAACCTGAAAGGTGGCTTGTGAATGGAGTTTTCCAGCAAGAGAGCCCTTAC
AAGTTTGCAGCCTTTAATGCGGGTCCCCGCATCTGCTTGGGGAAGGAATTTGCGTACAGG
CAGATGAAGATCATGGCTGCTACCCTGTTATATTTCTTCAGGTTCAAACTGGAGGATGAA
TCCAAGGAACCGACATACAAAGTCATGTTTACCCTGCACATCGACAAAGGTCTTCACTTG
TATGCATACCCACGTTCAGCATAG

Peptide Sequence

PEP ID

EER89117
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:1589218:1593384:-1 gene:SORBI_3010G019600 transcript:EER89117 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASHSQLSSIAATTGLYLLSALSVALLAMTLYIMGVLVSFAVLCIKEFAWSRRARDRPPL
VGTMFRMLKNFDRLFDEHVEYALAHRTSRLLFPGHSELLTSDPRVIEHILKNRFSKYSKG
DFNTQITKDLFGNGIFTTDGEKWRHQRKLASHEFSTSVLRNFSSGVFRTNAAKLTEKISS
AAANKTSIDMQDLLMKTTMDSIFKVGFGFELNTLSGSDEPSIQFSKAFDDANFLVFHRYV
DIFWKLKRFLSIGSEAKLKRDIEIIDNFIIQLIHQKREKMKNGRDHKAREDILTRFILAS
EEDPETMNDRYLRDIVLNFLIAGKDTTANTLTWFFYMLCKNPVVQDKVALEINESLEWAK
EDNSIENFTARLNESAIENMHYLHGAITETLRLYPAVAVDGKMADEDDTLPNGYRVVKGD
GVNYMIYAMGRMTYLWGKDAEEFKPERWLVNGVFQQESPYKFAAFNAGPRICLGKEFAYR
QMKIMAATLLYFFRFKLEDESKEPTYKVMFTLHIDKGLHLYAYPRSA

Transcript Sequence

Transcript ID

EER89117
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:1589218:1593384:-1 gene:SORBI_3010G019600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCCAAACACCCAGATTAGATCAGGCCAACACAAATGGATGGACGGAAGACCATATATGC
AAAGAAGTCTCCCACTGATCCTTACAGGACTTAGAAATCTGCAAATGATTTAGAAATCTG
CAAATGATTTGTCGTGCCATCACGTCAGTATTAAGTATTCGTGAACATGATTCGCCTGTT
GGATAATTAAATCTTGGTGCCAATGGTCAATGGCCAAACCAAACAAATGGTAATAATATT
GTTCTGAGGGAGCAGCAGCCAGCAGCTAGCTCCAATGGCTTCTCATTCCCAGCTCTCCTC
CATCGCCGCAACCACTGGCCTGTACTTGCTTTCAGCTCTCAGCGTAGCCTTGCTGGCGAT
GACCCTCTACATCATGGGTGTTCTTGTGTCCTTCGCTGTCCTCTGCATCAAAGAGTTTGC
TTGGAGTAGGAGAGCTCGTGATCGACCACCGCTCGTCGGGACTATGTTCCGGATGCTCAA
GAATTTCGACAGGCTCTTCGATGAGCATGTGGAGTACGCGCTTGCCCATCGGACCAGCAG
GCTGCTCTTTCCTGGGCACAGTGAGCTCTTGACCTCTGATCCACGAGTCATTGAACATAT
CCTCAAGAACAGATTCAGTAAATACAGTAAGGGCGACTTCAACACTCAAATCACGAAGGA
TCTCTTTGGAAATGGCATTTTCACAACCGACGGGGAGAAGTGGCGGCACCAGAGGAAGTT
AGCGAGCCATGAGTTCTCAACCAGCGTCCTTCGCAACTTCAGCAGTGGTGTGTTCAGAAC
AAATGCTGCAAAACTAACAGAGAAGATCTCATCGGCAGCAGCCAATAAAACTTCCATAGA
CATGCAGGATCTTTTGATGAAAACAACTATGGATTCAATCTTCAAAGTGGGATTCGGTTT
TGAGCTGAACACACTATCTGGTTCAGATGAACCTAGCATTCAATTCAGCAAGGCCTTCGA
TGATGCAAACTTTCTTGTTTTCCACCGATATGTTGATATATTCTGGAAACTGAAAAGGTT
TCTTAGTATTGGCTCAGAAGCTAAACTGAAGAGGGACATTGAGATCATCGACAATTTTAT
AATTCAGTTGATCCATCAAAAGAGAGAGAAAATGAAGAATGGACGTGACCATAAGGCCAG
AGAGGACATACTAACAAGATTTATATTAGCAAGTGAAGAGGACCCTGAAACGATGAATGA
CCGTTACCTGCGTGACATAGTCCTCAACTTCCTAATCGCCGGGAAAGACACCACAGCAAA
TACCCTGACCTGGTTCTTCTACATGCTATGCAAGAATCCCGTGGTGCAGGATAAGGTTGC
CCTTGAAATTAATGAGTCACTTGAGTGGGCCAAGGAAGATAACAGCATTGAGAACTTCAC
TGCAAGATTGAATGAAAGTGCTATTGAAAACATGCATTATCTCCATGGTGCGATCACTGA
GACACTACGTCTGTATCCTGCTGTTGCAGTGGATGGTAAGATGGCAGATGAAGATGATAC
CCTGCCTAATGGCTATAGAGTGGTTAAAGGAGATGGAGTGAACTACATGATTTATGCCAT
GGGAAGGATGACATACCTCTGGGGCAAGGATGCTGAAGAATTCAAACCTGAAAGGTGGCT
TGTGAATGGAGTTTTCCAGCAAGAGAGCCCTTACAAGTTTGCAGCCTTTAATGCGGGTCC
CCGCATCTGCTTGGGGAAGGAATTTGCGTACAGGCAGATGAAGATCATGGCTGCTACCCT
GTTATATTTCTTCAGGTTCAAACTGGAGGATGAATCCAAGGAACCGACATACAAAGTCAT
GTTTACCCTGCACATCGACAAAGGTCTTCACTTGTATGCATACCCACGTTCAGCATAGAC
CCCCAAACAAGATATCCTTTGCTGACGTGCATATTCCACAAATGACACTAGTGTTTTGCC
CCCTTTTAGCAAGTCACTGTGAGTACATACAAGAGCAATGAAGCAGCATGAGCATGGGAC
AGTTTTAGGTAAAATTAAGTTATTTAATGAATTGGTAATTACCATCCCAATAGCATGGGA
TCAAACATGATCCATATATTGGTCTTTCAAAAAAAAAGATATCGAAACGAAACTACCCAT
CGAATGAGAAGTATACTTTATTTCTTATTATTAATCGCATGATACCCATTGCTAACAGTA
ACATGAAGATCCAAGCAATCTCTGCACATGAACATTACAGTAATAATAGAAAGAAACTGC
AAAATGCAAGAGAACAGCAAGGACGAGAACGAGAACGGGTCCGCGAGCACGTGAGTTAGC
CCGGCACTGATATTCGTTGAGCTGAAAGTAATTATGTTTCCCGGGTGCTTTGCTGTAGTT
AATCCAGATGGGCCACGGTAGCTGCCTCTTGGTATTGAGAGGCCCAAACTGTTGGTTTGC
GATATATAAGTATACCTTTGCCGATGAGTCCGATAATACCATTTTGCTGTATATACAGTA
GAAACAAATTGTG