Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89106
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:1362256:1365793:-1 gene:SORBI_3010G016900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCGCCGGGTGCGGCGGCGGCGGCGTCGGCGACGCCAAGTACAACTCGTACAAG
GCGCCGGGGCTGCGGGGCGCCTTCCTGGAGGCGGCGCACGTCTCGTGCCTCGAGGACCGG
TACGCGCTGGGCCCGCAGCTTGGGTGGGGCCAGTTCGGCGTGATCCGGTCCTGCTCCGAC
CTCGTCACCGGCGAGGCGCTGGCCTGCAAGTCCATCGCCAAGGGCCGCCTGCTGTCCCCC
GACGACGTGCGCGGGGTCAAGCTCGAGATCGAGGTCATGGCGCGCCTCGCGGGCCACCCC
AACGTCGTCGACCTCAAGGCCGTGTACGAGGACCACGACTCCGTGCACCTCGTCATGGAG
CTCTGCGCGGGCGGGGAGCTCTTCCACCGACTCGAGGAGCGCGGATGCTTCTCCGAGCAC
GAGGCCGCAGTGCTGTTCCGGTACCTCATGGAGGTCGTCGCGCATTGTCACAGCAAAGGG
ATCGTGCACCGGGACCTCAAGCCCGAGAACATCCTCCTCGTCAGCAAGTCGCCCTCGTCG
CCGATCAAGCTCGCTGACTTTGGACTCGCTACCTACATCCAGCCTGGTCGAAGCTTGAGC
GGCATGGTAGGCAGCCCGTTCTACATTGCGCCAGAGGTGCTCTCCGGTGGATACAATGAG
GCCGCCGATGTCTGGAGTGCGGGGGTGATACTCTACATCCTCCTGAGTGGCATCCCGCCA
TTTTGGGGGAAAACCAAGTCCAAGATTTTCGAGTGCATCAGATCGATGGAGCTGCGATTC
CCTTCTGATCCATGGGATAGGGTTTCTGATTCGGCCAAGGAACTAGTCACCGGGATGTTA
AGGCGTGACCCTAGACAACGACTCACGGCCAAGCAGGTTCTAGAGCATCCGTGGATGCAA
GAACACGCGGACCAATCACAAGATTCCTGCAGCCATTGCCACGAGATCGGCCTCCGGCGG
GAGGACCCTGGCTCATGCTCCTTCTCCATGCCACTAGCGTCACGGAGCAGGGACATGAGC
TTCAACACAGGCGGCGCGATCGCCTGCCAGGGCACGCCAGAGGACGAGGCGTGCTGCTCG
CCCACGTTCGCCACCGCCTGCAGGTCGTCCTTCTCGGCGTTTGTCACCGACCCAGCCCCG
TCGTCCTGCCTGGCCTCCACCTCCGGTGGCTCTGGGTTCTCATTCGGTGGGGCCTGTGAA
CCGCCCTGTGGAGGTTTCCCATTGCCTGTGCCTTCCATGCCGAGCTTCTCGTTCTTCAGC
GCGCAAGACTGCAGCGAGCCTGAACCGTCGGTGGCGGCGGCAGCCGAGAAAGCTCCCTGC
GACGCGACGGTGGCTGCCTCGTCCCTGAGGACGGCAAAAGGGGCCACGTCGCGGGGTGTC
GTCGGCGTCAACGGCAGGCGGAACCACACGATCGGCGCCGGCGGGCGGGAGCACCTGGAC
GTGGCGGTGTCGGAGTCCGTCATACGCTGGGCGTCGTGCACCAACTTCTCCACGACGCAC
TCGCTCCGGGCCTCCCTCGTGTGCTAG

Peptide Sequence

PEP ID

EER89106
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:1362256:1365793:-1 gene:SORBI_3010G016900 transcript:EER89106 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAGCGGGGVGDAKYNSYKAPGLRGAFLEAAHVSCLEDRYALGPQLGWGQFGVIRSCSD
LVTGEALACKSIAKGRLLSPDDVRGVKLEIEVMARLAGHPNVVDLKAVYEDHDSVHLVME
LCAGGELFHRLEERGCFSEHEAAVLFRYLMEVVAHCHSKGIVHRDLKPENILLVSKSPSS
PIKLADFGLATYIQPGRSLSGMVGSPFYIAPEVLSGGYNEAADVWSAGVILYILLSGIPP
FWGKTKSKIFECIRSMELRFPSDPWDRVSDSAKELVTGMLRRDPRQRLTAKQVLEHPWMQ
EHADQSQDSCSHCHEIGLRREDPGSCSFSMPLASRSRDMSFNTGGAIACQGTPEDEACCS
PTFATACRSSFSAFVTDPAPSSCLASTSGGSGFSFGGACEPPCGGFPLPVPSMPSFSFFS
AQDCSEPEPSVAAAAEKAPCDATVAASSLRTAKGATSRGVVGVNGRRNHTIGAGGREHLD
VAVSESVIRWASCTNFSTTHSLRASLVC

Transcript Sequence

Transcript ID

EER89106
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:1362256:1365793:-1 gene:SORBI_3010G016900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACCTCCAAGCTTAGCCCAAGATATAAACATTTTTTTTTCTTCAAAAAAGGCAAAATAA
GCCATGGATAAACAAAGCTTAACCACATGATTAGCGGGGGGGCTCCATTTGCTGCTACTT
CTCTACTACTACTTGTTGGCTTGTTGCCCTATCAAAGAGGGAGTGGGGGGGCGCCTCCCC
ACCACCAGCAGAGCAGAGCGGACCATCACATTTCACCACCACCTCTCCCTCCCTCGCTCT
CTGCGCTGGCGCCTGGCGGCCGAGCGCCGCGAGCTTGGCCTCGGCCTCGGCCTCGGAGGA
GCTGAAGCTGACCCCGCGGCCGGCCGCCGCGGCGACGAGCGACGCGGGTGCGTCTCCTAG
TTCCTAGCGTATACTACCTGTTTCTCCGAGGCTCGGCGGGGGCGGTTTCGAGGCCGTCCC
GAGCGAGACGCGCCTCGATCTGCTCTGCGCGCCCACCCAGTCGTGTCCGCCCGCGCTTGT
CCCGTGGGAGTCGGCTGCGGGGCGCGCCTCCGGCGAGCCGGTTCCCCGCGGTGCGAATTT
TGAATTCCGCCAAGGGTGTTTCCGGGTCCCGAGCTCCCGGGGCGGCGTTGCTGGATTTTT
TTTTTCTCCCCTGCGGGGTAAAGCCGCGATTTTGGGGTTTCGAGAGCTAAAAGCCTTGCT
GTTTTGCTTTTTTCCTCGCCGCAGATTCGGCAGCCGTGCGCGGAATGCCCGTGGACGGAG
GGAGGGAGTGACGGCGCAGCTGACCTGAGCTGAGGCCGCGAGATTCGGGAGCCTCGCTCG
GGGGCGGGCGGGCTTGGAGATTCGCGGCCTGCGTAGGCGGGGGCGCGCGCTCTGCGGTGC
GGCGGCGGAGCTCCAGCCGGTTTCGCCAGCGTGTGGGACCTCAGCGCGATGGCCGCCGCC
GGGTGCGGCGGCGGCGGCGTCGGCGACGCCAAGTACAACTCGTACAAGGCGCCGGGGCTG
CGGGGCGCCTTCCTGGAGGCGGCGCACGTCTCGTGCCTCGAGGACCGGTACGCGCTGGGC
CCGCAGCTTGGGTGGGGCCAGTTCGGCGTGATCCGGTCCTGCTCCGACCTCGTCACCGGC
GAGGCGCTGGCCTGCAAGTCCATCGCCAAGGGCCGCCTGCTGTCCCCCGACGACGTGCGC
GGGGTCAAGCTCGAGATCGAGGTCATGGCGCGCCTCGCGGGCCACCCCAACGTCGTCGAC
CTCAAGGCCGTGTACGAGGACCACGACTCCGTGCACCTCGTCATGGAGCTCTGCGCGGGC
GGGGAGCTCTTCCACCGACTCGAGGAGCGCGGATGCTTCTCCGAGCACGAGGCCGCAGTG
CTGTTCCGGTACCTCATGGAGGTCGTCGCGCATTGTCACAGCAAAGGGATCGTGCACCGG
GACCTCAAGCCCGAGAACATCCTCCTCGTCAGCAAGTCGCCCTCGTCGCCGATCAAGCTC
GCTGACTTTGGACTCGCTACCTACATCCAGCCTGGTCGAAGCTTGAGCGGCATGGTAGGC
AGCCCGTTCTACATTGCGCCAGAGGTGCTCTCCGGTGGATACAATGAGGCCGCCGATGTC
TGGAGTGCGGGGGTGATACTCTACATCCTCCTGAGTGGCATCCCGCCATTTTGGGGGAAA
ACCAAGTCCAAGATTTTCGAGTGCATCAGATCGATGGAGCTGCGATTCCCTTCTGATCCA
TGGGATAGGGTTTCTGATTCGGCCAAGGAACTAGTCACCGGGATGTTAAGGCGTGACCCT
AGACAACGACTCACGGCCAAGCAGGTTCTAGAGCATCCGTGGATGCAAGAACACGCGGAC
CAATCACAAGATTCCTGCAGCCATTGCCACGAGATCGGCCTCCGGCGGGAGGACCCTGGC
TCATGCTCCTTCTCCATGCCACTAGCGTCACGGAGCAGGGACATGAGCTTCAACACAGGC
GGCGCGATCGCCTGCCAGGGCACGCCAGAGGACGAGGCGTGCTGCTCGCCCACGTTCGCC
ACCGCCTGCAGGTCGTCCTTCTCGGCGTTTGTCACCGACCCAGCCCCGTCGTCCTGCCTG
GCCTCCACCTCCGGTGGCTCTGGGTTCTCATTCGGTGGGGCCTGTGAACCGCCCTGTGGA
GGTTTCCCATTGCCTGTGCCTTCCATGCCGAGCTTCTCGTTCTTCAGCGCGCAAGACTGC
AGCGAGCCTGAACCGTCGGTGGCGGCGGCAGCCGAGAAAGCTCCCTGCGACGCGACGGTG
GCTGCCTCGTCCCTGAGGACGGCAAAAGGGGCCACGTCGCGGGGTGTCGTCGGCGTCAAC
GGCAGGCGGAACCACACGATCGGCGCCGGCGGGCGGGAGCACCTGGACGTGGCGGTGTCG
GAGTCCGTCATACGCTGGGCGTCGTGCACCAACTTCTCCACGACGCACTCGCTCCGGGCC
TCCCTCGTGTGCTAGCAATAGCAACTATAGTGGTGTTCCACGCGGCGCCAGCGGGAGCTG
GGATCGATATTGCTTTGGCCGTTGTTTGCCTGTAAAGCGCGATGCAATGCAATGCAAAGG
TGCTAAGGGTGAGGTGAATTTGAGTGTATGAGATGAGAGGTAGAAGAGTGTAGCCTGGAC
TTGTATAATACATATTTATACACACAGTGCTGTTATAGTGGTAATAGATTAATTAAAGAG
TGCTGATGTGATTGCATGCTGTCATGATGGATGAGTACTACTACTAGTGCCTTTCGCCGT
TGTTGCACTTGTCAGTGTCTAAGGTGTGGTGTGTGCACCAATCAGTCGAGTTCTCTTCGA
CTTCAGTTTTCTTTTTTAGCTGGAGTGCGTTTTTTTCCTCCTGTTTTCTATGTTCT