Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER89026
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:35071:42266:-1 gene:SORBI_3010G000600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGATCTGTGGAGGAGACCAAGAGATCTCTGACAGTTGCCCCCTTTGAGTGCGCGTGG
GCCGAGGAGCTTCGCTTCGGGGAGCCTGGCCGTGGCTGCATCGCCTTCGAGGCATCAGCC
CAGAACGATGTCACCCTGGTCTTCCGCCACCTGCTTGGGAGCCAGCACTACCACTACAAG
ACGGACACCAGCCGCCACTACACCGTCATCTTGGGCAGCCATAGGAACAAACGGCTCAAG
ATCGAAGTAGATGGAATCACTGCTGTTGATGTTACTGCCGTCGGCCTCTGCTGCTCCTCG
TCTTTCCAGAGCTACTGGATCAGCATCTATGACGGATGCATAAGCATCGGCCAAGGAAAG
CATCCAAGCAACAATCTCCTTTTCCAATGGCTTGATCCTGATCCCAACCCACATGTTCAG
TATGTTGGCCTATCCAGCTGGGACAAGCATGTTGGGTACAGAAACATAAGCCTTCTTCCA
TCAGCTCCCCCAAATAGCATATTTTGGACTCAGATTGAGTATGCCAACGTCCACTGGGTT
GCTGACGCTGGAGACTATGTGAGGAAACAACTGTCAAGAGATGATTGTCATCAAAGGGTA
CTTGCAGACTTTCTAGAGAACTGGGATTTCTCTGATGCTGTATTTGTCGTTGGCACTGAA
AGAAAGGTCGTCCCTGCACACAAACTTGTCTTGTGTGCCTCCGGGGATTTCCCTTTTGAA
ATGGGGGATGAAGCTACCATTGTGCTTCCATCAGCATCCTACCCTGTTCTCCACTCCCTT
CTTGAGTATATCTATACAGGTTCGACGCAGATTGCTGAATGGCTACTAACTTCTGTGCTG
GAGTTGAGCTCGCAGTTTAAAGTCGAACCACTGGTGAAGTGCTGCAAAGAAATCATTGAC
TGTTTAGAAGTGGATAAGAAACTTTCTGATTCTGGAAAAATCTTAATAAAATTTCCAAAA
AGCGGACTCCAAGATCATAGATTTGACTCTTCTCCACTCAAAGCACCACTGAATGTGCAG
AAAGTTGGAGAGTTCCTTGCAAATGGTGAACATAGTGATATAAATATCTATGTTAATGGA
CATGGTCTTGTCAGTAAGGGTCACAAGCTTATCCTTAGCCTGTGGAGCGCTCCACTTGCC
AAGATGTTCACAAACGGGATGAGGGAAAGCAGTGCCACGGATATCTTTTTCGGAGATGTT
CCTCCTGAACCATTCTTTCTCCTCCTTCAGTTTATGTACTACGGGAAACTTAAGTTGGAT
ACTAGGGATACTACATCAGTGTTGGTTCAACTTCTTCTACTAGCAGATCAGTTCGCCATC
ACTGTTCTTCAGTTTGAATGCTGCAAACGAATAATGGAATGCCTTTCAGAGGACACTGTA
TGTTCAGTCTTACAGGCAGTTTCATCAATCTCATCTTGTAAACCGCTTGAAGAAGTATGC
AAGAGGAATTTTGCTATGCATTTTGATTATTGCACAACTGCTTGCACGGACTTTGTGTTG
TTAGATGAGGCACCATTTAAGGATATTCTTGAGCATGGTGATATGACAGTAACGTCGGAG
GAGAGGGTTCTGGATGTCATTTTAACATGGTGCATGGGAGCTTGTGAAACTTTTCACTGG
ACTTCAGTAGATGAGCTCTTGAGATCTTCAACACCAGAGCAGCTCTTTGGAGAGAGGCTT
TCCGGCATCAATACTTTGCTACCATTAGTGAGATTCCCTTTGATGCAGCTGTCTATACTA
AAGAGGATGGAGAGAAGTACTCTAGCAAACGACATACAAGCATTCAGACAGTTGGTTGCA
GAGGCCATTGAATTCTCTCATGCTGGACAATTGATGCTTACATCATATGAATGTGAGAGA
TTTCAGCATAGGCGCTCGAGCTATAAAGAGCTGCAGTATATCTCTGATGGTGATAACAAC
GGTGTTATCTACTATGCTGGAACATCATTTGGAAAACATCAGTGGATGAATCCTGTGTTA
ACCAAGAATATCACTGTGGTGGCAAGCAGTCCAAATTCAAGGCACACGGATCCAAAGGCT
TTGGTTTCAAAGAATTACCAGGGGACATGTTTTGCTGGGCCTTGTATTGAAAATGGCAAG
AAGCTTTCTTGGTGGATGGTAGACATCGGACAGGACTACCAGCTGATGTGCAACTACTAC
ACGGTGAGGCAGGATGGCTCCACAACATTCATGAGATCTTGGGCTCTTCAGGGATCCATG
GACGGCCGGAACTGGACAAGCCTCCGTGTCCATGACGACGACCCTACCATTTGCCACCCG
GGCCAGTTCGCCTCTTGGCCCATCGTTGGCCCGGCGGCCCTTCTGCCCTTCCGATTCTTC
AGGGTCGCCCTGACAGGCCCGGCCGCCGGATGTGCTTGGAACCTCTGCATTTGCTTCCTA
GAGCTCTACGGCTACTTCCGTTAG

Peptide Sequence

PEP ID

EER89026
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:35071:42266:-1 gene:SORBI_3010G000600 transcript:EER89026 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRSVEETKRSLTVAPFECAWAEELRFGEPGRGCIAFEASAQNDVTLVFRHLLGSQHYHYK
TDTSRHYTVILGSHRNKRLKIEVDGITAVDVTAVGLCCSSSFQSYWISIYDGCISIGQGK
HPSNNLLFQWLDPDPNPHVQYVGLSSWDKHVGYRNISLLPSAPPNSIFWTQIEYANVHWV
ADAGDYVRKQLSRDDCHQRVLADFLENWDFSDAVFVVGTERKVVPAHKLVLCASGDFPFE
MGDEATIVLPSASYPVLHSLLEYIYTGSTQIAEWLLTSVLELSSQFKVEPLVKCCKEIID
CLEVDKKLSDSGKILIKFPKSGLQDHRFDSSPLKAPLNVQKVGEFLANGEHSDINIYVNG
HGLVSKGHKLILSLWSAPLAKMFTNGMRESSATDIFFGDVPPEPFFLLLQFMYYGKLKLD
TRDTTSVLVQLLLLADQFAITVLQFECCKRIMECLSEDTVCSVLQAVSSISSCKPLEEVC
KRNFAMHFDYCTTACTDFVLLDEAPFKDILEHGDMTVTSEERVLDVILTWCMGACETFHW
TSVDELLRSSTPEQLFGERLSGINTLLPLVRFPLMQLSILKRMERSTLANDIQAFRQLVA
EAIEFSHAGQLMLTSYECERFQHRRSSYKELQYISDGDNNGVIYYAGTSFGKHQWMNPVL
TKNITVVASSPNSRHTDPKALVSKNYQGTCFAGPCIENGKKLSWWMVDIGQDYQLMCNYY
TVRQDGSTTFMRSWALQGSMDGRNWTSLRVHDDDPTICHPGQFASWPIVGPAALLPFRFF
RVALTGPAAGCAWNLCICFLELYGYFR

Transcript Sequence

Transcript ID

EER89026
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:35071:42266:-1 gene:SORBI_3010G000600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTGGATTCTTCCAGCAGAGCACGACACGTCTTGCTCTTGCTCGCTGTTGGAGTTGGAGTT
GGACAGGGACTCCGGCGGCGCTAAACTGCAATCGAGTTTCGAGTTTGACCTCCGCGCACG
CAGACAGCAGAGGGCAGCCGGCTTCCCGCCTGGGGCAGGTCCTCCCAAGCTGCAGCAGCC
GTCGCCGCCCCTCCCATCCGGCCGGTCCTTCTCTCCATCTTCTTCTTGGTAAGTTAACTT
TCTTTGCGTATCCAATCGGCAATCGCTCTTAGTTTACTTGTCTAATCGCATCTTGGAAAC
CATTCAGTTCAACCCACTTGAGTTCATACTTCATAAGCTGCCACACCAATGAGATCTGTG
GAGGAGACCAAGAGATCTCTGACAGTTGCCCCCTTTGAGTGCGCGTGGGCCGAGGAGCTT
CGCTTCGGGGAGCCTGGCCGTGGCTGCATCGCCTTCGAGGCATCAGCCCAGAACGATGTC
ACCCTGGTCTTCCGCCACCTGCTTGGGAGCCAGCACTACCACTACAAGACGGACACCAGC
CGCCACTACACCGTCATCTTGGGCAGCCATAGGAACAAACGGCTCAAGATCGAAGTAGAT
GGAATCACTGCTGTTGATGTTACTGCCGTCGGCCTCTGCTGCTCCTCGTCTTTCCAGAGC
TACTGGATCAGCATCTATGACGGATGCATAAGCATCGGCCAAGGAAAGCATCCAAGCAAC
AATCTCCTTTTCCAATGGCTTGATCCTGATCCCAACCCACATGTTCAGTATGTTGGCCTA
TCCAGCTGGGACAAGCATGTTGGGTACAGAAACATAAGCCTTCTTCCATCAGCTCCCCCA
AATAGCATATTTTGGACTCAGATTGAGTATGCCAACGTCCACTGGGTTGCTGACGCTGGA
GACTATGTGAGGAAACAACTGTCAAGAGATGATTGTCATCAAAGGGTACTTGCAGACTTT
CTAGAGAACTGGGATTTCTCTGATGCTGTATTTGTCGTTGGCACTGAAAGAAAGGTCGTC
CCTGCACACAAACTTGTCTTGTGTGCCTCCGGGGATTTCCCTTTTGAAATGGGGGATGAA
GCTACCATTGTGCTTCCATCAGCATCCTACCCTGTTCTCCACTCCCTTCTTGAGTATATC
TATACAGGTTCGACGCAGATTGCTGAATGGCTACTAACTTCTGTGCTGGAGTTGAGCTCG
CAGTTTAAAGTCGAACCACTGGTGAAGTGCTGCAAAGAAATCATTGACTGTTTAGAAGTG
GATAAGAAACTTTCTGATTCTGGAAAAATCTTAATAAAATTTCCAAAAAGCGGACTCCAA
GATCATAGATTTGACTCTTCTCCACTCAAAGCACCACTGAATGTGCAGAAAGTTGGAGAG
TTCCTTGCAAATGGTGAACATAGTGATATAAATATCTATGTTAATGGACATGGTCTTGTC
AGTAAGGGTCACAAGCTTATCCTTAGCCTGTGGAGCGCTCCACTTGCCAAGATGTTCACA
AACGGGATGAGGGAAAGCAGTGCCACGGATATCTTTTTCGGAGATGTTCCTCCTGAACCA
TTCTTTCTCCTCCTTCAGTTTATGTACTACGGGAAACTTAAGTTGGATACTAGGGATACT
ACATCAGTGTTGGTTCAACTTCTTCTACTAGCAGATCAGTTCGCCATCACTGTTCTTCAG
TTTGAATGCTGCAAACGAATAATGGAATGCCTTTCAGAGGACACTGTATGTTCAGTCTTA
CAGGCAGTTTCATCAATCTCATCTTGTAAACCGCTTGAAGAAGTATGCAAGAGGAATTTT
GCTATGCATTTTGATTATTGCACAACTGCTTGCACGGACTTTGTGTTGTTAGATGAGGCA
CCATTTAAGGATATTCTTGAGCATGGTGATATGACAGTAACGTCGGAGGAGAGGGTTCTG
GATGTCATTTTAACATGGTGCATGGGAGCTTGTGAAACTTTTCACTGGACTTCAGTAGAT
GAGCTCTTGAGATCTTCAACACCAGAGCAGCTCTTTGGAGAGAGGCTTTCCGGCATCAAT
ACTTTGCTACCATTAGTGAGATTCCCTTTGATGCAGCTGTCTATACTAAAGAGGATGGAG
AGAAGTACTCTAGCAAACGACATACAAGCATTCAGACAGTTGGTTGCAGAGGCCATTGAA
TTCTCTCATGCTGGACAATTGATGCTTACATCATATGAATGTGAGAGATTTCAGCATAGG
CGCTCGAGCTATAAAGAGCTGCAGTATATCTCTGATGGTGATAACAACGGTGTTATCTAC
TATGCTGGAACATCATTTGGAAAACATCAGTGGATGAATCCTGTGTTAACCAAGAATATC
ACTGTGGTGGCAAGCAGTCCAAATTCAAGGCACACGGATCCAAAGGCTTTGGTTTCAAAG
AATTACCAGGGGACATGTTTTGCTGGGCCTTGTATTGAAAATGGCAAGAAGCTTTCTTGG
TGGATGGTAGACATCGGACAGGACTACCAGCTGATGTGCAACTACTACACGGTGAGGCAG
GATGGCTCCACAACATTCATGAGATCTTGGGCTCTTCAGGGATCCATGGACGGCCGGAAC
TGGACAAGCCTCCGTGTCCATGACGACGACCCTACCATTTGCCACCCGGGCCAGTTCGCC
TCTTGGCCCATCGTTGGCCCGGCGGCCCTTCTGCCCTTCCGATTCTTCAGGGTCGCCCTG
ACAGGCCCGGCCGCCGGATGTGCTTGGAACCTCTGCATTTGCTTCCTAGAGCTCTACGGC
TACTTCCGTTAGATGTCCTGTCCACAAGCTTTCTTTTCCTAAAGAAGAGTAAATGAACAG
CTTTGTTAGTAACTAGAGCAGTTCTAAGATGGTCCAAGTTCTGTTGATTTTCTTTTTCTT
TTTAAAAAATAATATAGATAACAGGGTTTTTATTGCAAACACAAGTAATCTTTTCATGGG
TGGAAGGCATTCCGGAATAGGTTCTGCGATGGTACAATTGCAGGGCATTGTACATCATGA
AATGAAAGAAACAAGTACTCACAGTCACAGCTGAAAAACCGGAGTGAAGCCTAAGACTAA
GAGGGTGTTTATTTCAAAAAATTTTGGGTTTTGGTCCATCATTTTGCATAATAGAACTAA
ACAGCATACAAAATTTTTTGGCAAAAAGTGGTTATTCTCCGTTTTGGATTTAGCCTTGAG
AGAAAAAAAAAAAGCTCAAAAGAGCCTCAAGAGGCCTTCATGAGAGCAATAAATTCTGCA
TTTTGGATGGATTCTAAACATAACCTTGAAAATTTTGACATTTTGCATTTCATCACTCCA
AAGTAGTTGACATTTTGTATTTTGCATTTTTTTGAACTAAATTAACACCCCCTAAGATAA
GATGGTCACTCTAATAAGTCGCCTTGTTTATGTTGAGAGGGACTTTGTCTCCATGAGAGC
TAAGTTTGTGTTTATTTTGTTTTCTTCCACTCTGGTTGGGTCGTTGTCGTCTAGGTCTAA
GGTTGCCGCTTGCCAGAACGGCCGACGGCAGGTCCGTCCTCGCCGATGGCGGTTACTGGG
TTGAGCAACAGGGTGTCGCCGATGATATCGCTAGGGAACAAGGCTTTTTCCTAAAACTGT
AGTATTGCGAAACCACAATGATCGTAGGCATGTAATACCATAGTATGTAGAAACCACAGT
GTTTCTCTCTTTAAGAAAAGCCATTACGTGTTTGGCTACACAGCAATGCTTGTGTCTTTG
CTACTAAAAATAGCATGTATCTCTATATGTATCTTACGAAACTTTGCATGCGAATCATCA
CAACTCTATTTGAATATCTATATATAGGAAGCTATGCCCGCGCACCAAGCTCTGTAAAAA
ATAAAGAGGGTTAGGACCAAGTTTTTTAGACTAAAACAACTGTGGTTTTATTAATACCGT
AGTTTCTAAAACATCTTCTTTCTTTTAGATACCTAGGTATTTTAAAAAAATTATGGTATT
AAGCTAAAACTCTTGAAAAACTTTGTATCCAAATAGGGCTTTATTTCTATTTTTGCCTAT
GTCTGATAGGCATTCCTTCCATACTCTCCCCCACACCAAAAAAAGTCGCTATAAGATTCA
TACCAGCTAAACTTTGTAATAGAAAATATTAGTAACACATATTTATATATTTAAAGAAGT
TTATTATGAAAATATATTTAACAATTTATTTGATGTTACTATGTAAGTATCATAAATATT
AGTATTTTCTTATATATATTTTGTTAAAGTTGAAAATATTTGATTTCTCAAAAAGTGAGA
ATGACACTCAGTCTAGAACAGAGGGAGTATATGCTTGTTAGACTAGTCTTTTATTAAGTA
GCATTGGATTATCATTGCCATTCCTTTGAGTTTCTATTATTGTCCATGCTTCCTTGATCT
TTGGCCATATTGTACCCAATTACTATGCAA