Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88946
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:59709324:59713263:1 gene:SORBI_3010G260600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCAAGACAGAGAGCAGAAAGTTGTCCGATGACTATGAAGTTGCGGATGTTCTAGGC
CGAGGCGGGTTCTCGATAGTGAGGAGAGGAGTGAGCAAATCAGAGGGGAAGACCCAGGTC
GCCATAAAGACCTTGCGAAGGCTTGGCCCAGCCATGAACGGGATGCAGCAAGGGTCAAAG
GGTGGCCTTCCGATGTGGAAGCAGGTATCCATCTCTGACGCCTTGCTCACCAACGAGATT
CTCGTCATGAGGAGGATAGTTGAGAACGTCGCACCACATCCCAACGTCATAGGCCTGCAT
GATGTGTATGAGGATGCGCATGGCGTGCACCTGATCCTGGAGCTGTGCTCTGGTGGTGAA
CTGTTTGATAGGATAGTGGGGCGTGACCGGTACTCGGAGTTCGATGCAGCAGCTGTCATT
CGTCAGATTGCTAGGGGATTGGAGGCTCTTCATAAGGCAAACATCATACACAGGGACTTG
AAGCCAGAGAACTGCCTCTTCTCCGACAAGAATGAAGATTCCACGTTGAAGATCATGGAT
TTTGGTTTAAGTTCTGTCGAAGATTTCAGCGACCCAATTGTGACTCTGTTTGGGTCGATA
GATTATGTTTCGCCAGAAGCTCTCTCGAGGCAAGATGTTTCAGCTGCAAGTGATATGTGG
TCTGTTGGTGTAATTCTATATATCCTATTATCTGGATGCCCGCCATTTCATGCACCAACC
AATCGAGAAAAGCAGCAAAGGATACTGCAAGGAGAATTCAGTTTCCAGGACCATACATGG
AAAACAATATCTTCATCAGCGAAAGAATTGATTTCCAGGCTTCTTTCTGTTGAGCCTTAC
AAGAGGCCAACAGCAAGTGATCTTCTGGGGCATCCTTGGGTGATTGGAGACTGGGCAAAG
CAAGACCTCATGGACGCAGAGGTCATATCAAAGCTGCAGAGGTTCAATGCTAGAAGGAAA
CTGCGGGCAGCAGCAATCGCAAGCGTCCTCAGCAGCAAGGTGGCGTTGAGGACAAAAAGG
CTGAGGAACCTTTTGGGAACACATGACCTGAGCTCAGAGGAGCTAGACAATCTGCGGGCT
CATTTCGCACGAATATGCGCGGACGGCGAGAACGCGACGCTGGCGGAGTTCGAGCAGGTG
CTGAAGGCGATGAAGCTGGAGTCGCTGGTCCCTCTGGCGCCGCGCGTGTTCGACCTGTTC
GACAACAACCGCGACGGCACTGTGGACATGAGGGAGATCCTGTGCGGGCTGTCCAGCCTC
CGCAACTCCCGCGGCGACGACGCGCTCCGGCTCTGCTTCCAGATGTACGACGCCGACCGG
TCTGGGTGCATCAGCAAGGACGAGCTGGCGTCGATGCTGCGAGCGCTGCCCGAGGATTGC
CTGCCGGGAGACATCACGGAGCCCGGGAAGCTGGACGAGGTGTTCGACGAGATGGACGCC
AACGGCGACGGCAAGGTGAGCTTCGACGAGTTCAAGGCGGCGATGCAGAAGGACAGCGCG
CTCCAGGACGTCGTCCTCTCGTCCCTCCGGCCGCCGGCGCCGGGGCAGTAG

Peptide Sequence

PEP ID

EER88946
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:59709324:59713263:1 gene:SORBI_3010G260600 transcript:EER88946 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSKTESRKLSDDYEVADVLGRGGFSIVRRGVSKSEGKTQVAIKTLRRLGPAMNGMQQGSK
GGLPMWKQVSISDALLTNEILVMRRIVENVAPHPNVIGLHDVYEDAHGVHLILELCSGGE
LFDRIVGRDRYSEFDAAAVIRQIARGLEALHKANIIHRDLKPENCLFSDKNEDSTLKIMD
FGLSSVEDFSDPIVTLFGSIDYVSPEALSRQDVSAASDMWSVGVILYILLSGCPPFHAPT
NREKQQRILQGEFSFQDHTWKTISSSAKELISRLLSVEPYKRPTASDLLGHPWVIGDWAK
QDLMDAEVISKLQRFNARRKLRAAAIASVLSSKVALRTKRLRNLLGTHDLSSEELDNLRA
HFARICADGENATLAEFEQVLKAMKLESLVPLAPRVFDLFDNNRDGTVDMREILCGLSSL
RNSRGDDALRLCFQMYDADRSGCISKDELASMLRALPEDCLPGDITEPGKLDEVFDEMDA
NGDGKVSFDEFKAAMQKDSALQDVVLSSLRPPAPGQ

Transcript Sequence

Transcript ID

EER88946
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:59709324:59713263:1 gene:SORBI_3010G260600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GACCAATTCAAAGCAGCCCTTGAGCAATAGCAACCGGGTCAACAATAACCTTTGTAGCCT
GTCCACTTCTGAACGCCCATTTTTAAAAATTCTTGTCATCTTGCCATCAGCACAAAACAA
ATTCTCAATGGGTTTATTCCATCGTGTTGGTTGTTGCACATCTCACTTTCTTCTACCGTC
AGTCCGTCACCATGTTCAGCACCCCCACATTACTCTATTTATATGCTCTCTACTCTCTCA
GTTTGCTCCTACAGTAATCATAGACAAGCTACTTATACAACATATGGTACGTCCCTTTCT
ACTCCCAACTACTATACTGCTCCCAGTTTCTGCCCTTTTGTTTCCAATCTTCCTTCTTGT
TCCATAGAAACACATGGTCTCTTTTCTGTTCATCCTGCACTTACTACTCTAGTTTTTTTT
TTCTTGTACCAACACCCTGATTGTTTGCTGCCTCACTACCAGCTTCCCCAGTTCTTGTGG
CCTACCAATCAGCATCTGATACCAGTATTCAGTTACTTGCATAAATTTGCCAGGCAATGT
CCAAGACAGAGAGCAGAAAGTTGTCCGATGACTATGAAGTTGCGGATGTTCTAGGCCGAG
GCGGGTTCTCGATAGTGAGGAGAGGAGTGAGCAAATCAGAGGGGAAGACCCAGGTCGCCA
TAAAGACCTTGCGAAGGCTTGGCCCAGCCATGAACGGGATGCAGCAAGGGTCAAAGGGTG
GCCTTCCGATGTGGAAGCAGGTATCCATCTCTGACGCCTTGCTCACCAACGAGATTCTCG
TCATGAGGAGGATAGTTGAGAACGTCGCACCACATCCCAACGTCATAGGCCTGCATGATG
TGTATGAGGATGCGCATGGCGTGCACCTGATCCTGGAGCTGTGCTCTGGTGGTGAACTGT
TTGATAGGATAGTGGGGCGTGACCGGTACTCGGAGTTCGATGCAGCAGCTGTCATTCGTC
AGATTGCTAGGGGATTGGAGGCTCTTCATAAGGCAAACATCATACACAGGGACTTGAAGC
CAGAGAACTGCCTCTTCTCCGACAAGAATGAAGATTCCACGTTGAAGATCATGGATTTTG
GTTTAAGTTCTGTCGAAGATTTCAGCGACCCAATTGTGACTCTGTTTGGGTCGATAGATT
ATGTTTCGCCAGAAGCTCTCTCGAGGCAAGATGTTTCAGCTGCAAGTGATATGTGGTCTG
TTGGTGTAATTCTATATATCCTATTATCTGGATGCCCGCCATTTCATGCACCAACCAATC
GAGAAAAGCAGCAAAGGATACTGCAAGGAGAATTCAGTTTCCAGGACCATACATGGAAAA
CAATATCTTCATCAGCGAAAGAATTGATTTCCAGGCTTCTTTCTGTTGAGCCTTACAAGA
GGCCAACAGCAAGTGATCTTCTGGGGCATCCTTGGGTGATTGGAGACTGGGCAAAGCAAG
ACCTCATGGACGCAGAGGTCATATCAAAGCTGCAGAGGTTCAATGCTAGAAGGAAACTGC
GGGCAGCAGCAATCGCAAGCGTCCTCAGCAGCAAGGTGGCGTTGAGGACAAAAAGGCTGA
GGAACCTTTTGGGAACACATGACCTGAGCTCAGAGGAGCTAGACAATCTGCGGGCTCATT
TCGCACGAATATGCGCGGACGGCGAGAACGCGACGCTGGCGGAGTTCGAGCAGGTGCTGA
AGGCGATGAAGCTGGAGTCGCTGGTCCCTCTGGCGCCGCGCGTGTTCGACCTGTTCGACA
ACAACCGCGACGGCACTGTGGACATGAGGGAGATCCTGTGCGGGCTGTCCAGCCTCCGCA
ACTCCCGCGGCGACGACGCGCTCCGGCTCTGCTTCCAGATGTACGACGCCGACCGGTCTG
GGTGCATCAGCAAGGACGAGCTGGCGTCGATGCTGCGAGCGCTGCCCGAGGATTGCCTGC
CGGGAGACATCACGGAGCCCGGGAAGCTGGACGAGGTGTTCGACGAGATGGACGCCAACG
GCGACGGCAAGGTGAGCTTCGACGAGTTCAAGGCGGCGATGCAGAAGGACAGCGCGCTCC
AGGACGTCGTCCTCTCGTCCCTCCGGCCGCCGGCGCCGGGGCAGTAGTAGATGTAGACGG
AGCGAGAGGAGATTCAGTCCAGTCCAGCAGCTCGTTCCCTTCCCTTCCCTTCCCTTCCCT
TCCCACGAGAACACCAACACAACACCATTGAATTGATCATCAAGTACGGCACTGTACGGA
GTATTATAGCATCATCAATCCAAATCATGGCAGAACTTTTCCTT