Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88921
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:59352516:59355794:1 gene:SORBI_3010G255000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATCCCCGCTCCTCGCGCCTCCACTGCCGGAGGCAGCGGCAGCGGGTGGCGCCGCGTC
GCCCTCGCCCTCCTCCTCCTTCTCGCCCTGCTCACCCTCGCGCCACCCGCATCAGCGCAG
CCGGCGCCGACGACCCCAGCGCTGCAGGCGGCGTACACAGCGCTCCAGTCCTGGAAGCGG
ACGGCCATCTTCTCCGACCCATCCAACTTCACATCCAACTGGGTCGGCTCGAACGTGTGC
GCCTACAACGGCATCTACTGCGCGCCGCGTCCCTCCGACGGAGCGCTCGCCGTGGCCGGG
ATCGACCTCAACCACGCCGACATCGCGGGCCACATCCCCGCCGACCTCCCCCTCGGCCTC
CCCGACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCGGGGTGCTCCCGGACACC
TTCCTCCGTCTCCGCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGCGCC
TTCCCCGCCGTCGTCCTGGGTCTCCCGGCCCTCAGGTACCTCGACCTCAGGTTCAATGAC
TTCGAGGGACCTATCCCGCCGGCGGTCTTCGACCGTCCGCTCGATGCCATCATCCTCAAC
TCCAACCGTCTCCGTGGCCCCATCCCGGGGAACCTTGGGAACTCGCCGGCGTCCGTGGTG
GTGCTCGCGCACAACCGGCTTGGTGGATGTATCCCGCCGTCGATTGGGAGGATGGCGGAT
ACGCTCAATGAGATCGTGCTCATTGACGACGACCTCACTGGCTGCGTCCCGCCGCAGGTC
GGGTTGCTTAGGAAGGTGACGGTGTTTGATGTCAGTGGGAACCACCTCCAGGGCCCGCTC
CCGCCGACCGTCGCTGGGATGGCTGCCGTTCAGCAGCTCAATGTGGCTGGGAACCTGCTC
AGGGGCCCCGTGCCGCCGGCGGTGTGCGCGCTGCAGGGGACGCTCAGGAACTTCACCTAC
GAGGACAACTTCTTCACCTCGCGCCCTGGGTGCCCCGTCGCCACGGCCGACGGGAGGTGG
AACTGTATCCCTGGCGCTCCCGCGCAGCGCCCGCCGCCGCAGTGCGCTGCTGCGGCCGCG
CCGTTCGACTGCAGGACGGCGCAATGCCAGGCGCCGCCCACGTCTGGCACGCCTGGGTCG
GGCCCCGGCGGTCCTTCACAGCCGCTGCCCCCGCCAGGCTCCACGACTCCGTCGTACCCG
TCCCCGCCAGGGAGCTCCACCACGCCGTCGCACCCGTCGCCGCCAGGAAGCTCCACCACG
CCGTCGCACCCGTCGCCGCCAGGGGGCGCCACGACTCCGTCGTACCCGTCTCCGCCCACA
GACGGCAGCAGCCCCAAGCCATCAATGCCGCCTTCATCTGGGCCTTCATCCCATGGCGGC
TCGCCTCCGTCGTCCGGCTACCAGCCGCCGCCGCCGTCGTCAGGGTGGGCACCGTCGGGT
CAACCCGTGGGCGTGCCACCACCCGCAGAGCACCCCGGTGGCGTCTGGCCGCCGCACACG
CCAACGGCTCCCGGCACGCCAGGATCAGCGTATCCGCCGGGCACACCAGGAACGCCATCC
ACACCGACGACCCCGGGCACGCCAGGTTCGGCATTCCCGCCGACGACCCCTGGAGCGCCA
GGTTCGACATACCCGCCGACGACTCCGGGCGCACCAGGGTCGTCGCCATCCACCCCGACG
ACTCCAGGCACGCCAGGTTCAACATACCCACCGACGACTCCGGGCGCACCAGGGTCGTCA
CCATCCACACCGACGACTCCAGGCACGCCAGGATCAACGTTCCCGCCGACGACGCCCGGC
GCGCCATCCACGCCGACGACACCCGGCTACCACCCTCCGTCCCCAGGTGGTGGTTCTCCA
GGCGGCGGCCACGGCGGCAACCAGCACGGCACTCCACCTTCAACACCAGGCAGCGGCGGC
GGCGTCCTGCCATTCCCGCCGGCCCACGGCATGCCCTACTCCTCGCCGCCTCCACCGCCG
TCCGACCCAGCGGGGAACCAGCCGTTCCCACCCGTCCACGGCGTGTCCTACTCGTCGCCC
CCACCGCCGCTCCCGCCCGTGTACCCCGTGTCCTACGCGTCGCCCCCGCCGCCGCTCCCG
CCCGTCTACGGCGTGTCCTACTCGTCGCCCCCGCCGCCCGCGACGCCGTACAAGAGCAAC
TAG

Peptide Sequence

PEP ID

EER88921
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:59352516:59355794:1 gene:SORBI_3010G255000 transcript:EER88921 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MIPAPRASTAGGSGSGWRRVALALLLLLALLTLAPPASAQPAPTTPALQAAYTALQSWKR
TAIFSDPSNFTSNWVGSNVCAYNGIYCAPRPSDGALAVAGIDLNHADIAGHIPADLPLGL
PDLALLHLNSNRFCGVLPDTFLRLRLLHELDLSNNRFVGAFPAVVLGLPALRYLDLRFND
FEGPIPPAVFDRPLDAIILNSNRLRGPIPGNLGNSPASVVVLAHNRLGGCIPPSIGRMAD
TLNEIVLIDDDLTGCVPPQVGLLRKVTVFDVSGNHLQGPLPPTVAGMAAVQQLNVAGNLL
RGPVPPAVCALQGTLRNFTYEDNFFTSRPGCPVATADGRWNCIPGAPAQRPPPQCAAAAA
PFDCRTAQCQAPPTSGTPGSGPGGPSQPLPPPGSTTPSYPSPPGSSTTPSHPSPPGSSTT
PSHPSPPGGATTPSYPSPPTDGSSPKPSMPPSSGPSSHGGSPPSSGYQPPPPSSGWAPSG
QPVGVPPPAEHPGGVWPPHTPTAPGTPGSAYPPGTPGTPSTPTTPGTPGSAFPPTTPGAP
GSTYPPTTPGAPGSSPSTPTTPGTPGSTYPPTTPGAPGSSPSTPTTPGTPGSTFPPTTPG
APSTPTTPGYHPPSPGGGSPGGGHGGNQHGTPPSTPGSGGGVLPFPPAHGMPYSSPPPPP
SDPAGNQPFPPVHGVSYSSPPPPLPPVYPVSYASPPPPLPPVYGVSYSSPPPPATPYKSN

Transcript Sequence

Transcript ID

EER88921
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:59352516:59355794:1 gene:SORBI_3010G255000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCGCGCGCGCCGCCAGTCCGCACGCCATGATCCCCGCTCCTCGCGCCTCCACTGCCGGA
GGCAGCGGCAGCGGGTGGCGCCGCGTCGCCCTCGCCCTCCTCCTCCTTCTCGCCCTGCTC
ACCCTCGCGCCACCCGCATCAGCGCAGCCGGCGCCGACGACCCCAGCGCTGCAGGCGGCG
TACACAGCGCTCCAGTCCTGGAAGCGGACGGCCATCTTCTCCGACCCATCCAACTTCACA
TCCAACTGGGTCGGCTCGAACGTGTGCGCCTACAACGGCATCTACTGCGCGCCGCGTCCC
TCCGACGGAGCGCTCGCCGTGGCCGGGATCGACCTCAACCACGCCGACATCGCGGGCCAC
ATCCCCGCCGACCTCCCCCTCGGCCTCCCCGACCTCGCGCTGCTCCACCTCAACTCCAAC
CGCTTCTGCGGGGTGCTCCCGGACACCTTCCTCCGTCTCCGCCTCCTCCACGAGCTCGAC
CTCAGCAACAACCGCTTCGTCGGCGCCTTCCCCGCCGTCGTCCTGGGTCTCCCGGCCCTC
AGGTACCTCGACCTCAGGTTCAATGACTTCGAGGGACCTATCCCGCCGGCGGTCTTCGAC
CGTCCGCTCGATGCCATCATCCTCAACTCCAACCGTCTCCGTGGCCCCATCCCGGGGAAC
CTTGGGAACTCGCCGGCGTCCGTGGTGGTGCTCGCGCACAACCGGCTTGGTGGATGTATC
CCGCCGTCGATTGGGAGGATGGCGGATACGCTCAATGAGATCGTGCTCATTGACGACGAC
CTCACTGGCTGCGTCCCGCCGCAGGTCGGGTTGCTTAGGAAGGTGACGGTGTTTGATGTC
AGTGGGAACCACCTCCAGGGCCCGCTCCCGCCGACCGTCGCTGGGATGGCTGCCGTTCAG
CAGCTCAATGTGGCTGGGAACCTGCTCAGGGGCCCCGTGCCGCCGGCGGTGTGCGCGCTG
CAGGGGACGCTCAGGAACTTCACCTACGAGGACAACTTCTTCACCTCGCGCCCTGGGTGC
CCCGTCGCCACGGCCGACGGGAGGTGGAACTGTATCCCTGGCGCTCCCGCGCAGCGCCCG
CCGCCGCAGTGCGCTGCTGCGGCCGCGCCGTTCGACTGCAGGACGGCGCAATGCCAGGCG
CCGCCCACGTCTGGCACGCCTGGGTCGGGCCCCGGCGGTCCTTCACAGCCGCTGCCCCCG
CCAGGCTCCACGACTCCGTCGTACCCGTCCCCGCCAGGGAGCTCCACCACGCCGTCGCAC
CCGTCGCCGCCAGGAAGCTCCACCACGCCGTCGCACCCGTCGCCGCCAGGGGGCGCCACG
ACTCCGTCGTACCCGTCTCCGCCCACAGACGGCAGCAGCCCCAAGCCATCAATGCCGCCT
TCATCTGGGCCTTCATCCCATGGCGGCTCGCCTCCGTCGTCCGGCTACCAGCCGCCGCCG
CCGTCGTCAGGGTGGGCACCGTCGGGTCAACCCGTGGGCGTGCCACCACCCGCAGAGCAC
CCCGGTGGCGTCTGGCCGCCGCACACGCCAACGGCTCCCGGCACGCCAGGATCAGCGTAT
CCGCCGGGCACACCAGGAACGCCATCCACACCGACGACCCCGGGCACGCCAGGTTCGGCA
TTCCCGCCGACGACCCCTGGAGCGCCAGGTTCGACATACCCGCCGACGACTCCGGGCGCA
CCAGGGTCGTCGCCATCCACCCCGACGACTCCAGGCACGCCAGGTTCAACATACCCACCG
ACGACTCCGGGCGCACCAGGGTCGTCACCATCCACACCGACGACTCCAGGCACGCCAGGA
TCAACGTTCCCGCCGACGACGCCCGGCGCGCCATCCACGCCGACGACACCCGGCTACCAC
CCTCCGTCCCCAGGTGGTGGTTCTCCAGGCGGCGGCCACGGCGGCAACCAGCACGGCACT
CCACCTTCAACACCAGGCAGCGGCGGCGGCGTCCTGCCATTCCCGCCGGCCCACGGCATG
CCCTACTCCTCGCCGCCTCCACCGCCGTCCGACCCAGCGGGGAACCAGCCGTTCCCACCC
GTCCACGGCGTGTCCTACTCGTCGCCCCCACCGCCGCTCCCGCCCGTGTACCCCGTGTCC
TACGCGTCGCCCCCGCCGCCGCTCCCGCCCGTCTACGGCGTGTCCTACTCGTCGCCCCCG
CCGCCCGCGACGCCGTACAAGAGCAACTAGCCGCGTGCTGTTCCACGGTCCGCCCGCCGC
CGCCGCGGTGGCGCACCCGCCAGTGACAGACAGAGTCGAGTCGCCATGACGCATCAGTAC
ATCTTGCACTGTAGCTGTTGGTTCTTCTTCCTCCTCGCGCCCGCCGCTATTTTCTCACTT
GTAGTAATTTTAAATTTGCTCCCTTTTCGAGGTTGGTTGGTTCTTTCGATCGATCGATTG
AATCGATCGGGCTGGATTCAAAGGCTCCGCGGATTCTTTCTTCCCCTTTCTCTACTAGTA
ATAGCAGCAGTACCCTTGTTGTTTAGCTCGATCTTGCTCGATCATCGTATCATGCTCGTT
CGTGTCTCTGATCTGCAAGCGAATTTGTTTATTGGTAGCAGTAACAGACTAACAGTTTTG
ATCCGTACGAGCTTTGCCGGCTGGCAGACGACGCGTCGCCGTGCCGGCGCTCCGTGCTCG
GAGTAATGAGAGGCGGAAAGCGAAGCCGGAAAGGTCCGGTGTCCATGGGCCACGCGTGCA
ATACACCAAGCAGTGCAGAGGACGACGAAGGGGAGGAGGAAGTACACGTAGACTGGAGTC
CACTGCCACTGGAGTGCCATCGGCAAACTGGCAGCTGGACCAGGGCTGCGGCATTCCGTT
CCGGTGGCGCCAGGCCGCCACCGCCCCCGACAAGGGCACATGCAAGGCCGGCGAGGCTTG
AGGAACGGATCATCGTCATATTCATATCGAACGAACGGGCGATGATCATCGTATCGTATC
GTACGAGTATTAACTACTAGGCCTTGTTTAGCTCCGAAAACTGAAAAATTTTCGGTACTG
TTGCACTTTCGTTTGTTTGTGATAAATATTATCCAATCATAGATTAACTAGAATCAAAAG
ATTCATCTCGTGATTTACAGCTAAACTGTGTAATTAGTTTTTATTTTCGTCTATATTTAA
TGTTTCATGCATGTGCCACAAGATTCGATGTGATGGAGAATCTTAAAAACTTTTTGGTTT
TCAGGGTGAACTAAACAAGGCCGCCATGACTCGAGGAGTGACCGTAAAGAAAAAACTTTT
ATATATCCTTCGGTGTCCGTGCACGTTTCACGTGACGCT