Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88601
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:52071725:52075228:1 gene:SORBI_3010G181500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGACGTCGGCGCCGCCCAATGCCGCCGCTCCGCCGGCGCAGCAGCCACGGAGGCGG
CTGCCGGACTTCCAGCAGTCAGTGCGGCTCAAGTATGTGAAGCTGGGGTACCACTACCTC
ATCTCCCACGGGATGTACCTGCTGCTGTCGCCGCTGATGGCGCTCGTCGCCGTGCAGCTC
TCCACCGTCTCCCCGCGCGACCTCGCCGACCTGTGGGAGCAGCTCCGCTTCAACCTCCTC
TCCGTCGTCGCCTGCTCCACGCTGCTCGTCTTCCTCTCCACCGTCTACTTCCTCACCCGC
CCGCGCCCCGTGTACCTGCTCGACTTCGCCTGCTACAAGCCGGAGCCGGAGCGCAAGTGC
ACGCGCCAGACCTTCATGCACTGCTCCAACCTCACCGGATCCTTCACGGACGACAACCTC
GAATTCCAGCGCAAGATCCTCGAGCGCTCCGGCCTCGGCGAGGACACCTACCTTCCCCCC
GCCGTGCTCCGGGTGCCCCCCAACCCGTGCATGGACGAGGCGCGCAAGGAGGCGCGCGCC
GTCATGTTCGGCGCCATCGACCAGCTGCTCGAGAAGACCGGGGTCAGGCCCAAGGACATT
GGCGTCCTAGTGGTCAACTGCAGCCTGTTCAACCCGACGCCGTCGCTGTCAGCCATGGTG
GTGAACCATTACAAGCTGAGGGGGAATATTGTGAGCTACAACCTCGGCGGGATGGGCTGC
AGCGCTGGGCTGCTGTCCATTGACCTCGCCAAGGATCTGCTGCAGGTGCACCCCAACTCT
TACGCGCTGGTGATCAGCATGGAGAACATCACACTGAATTGGTACTTCGGGAACAACCGG
TCCATGCTCGTGTCGAATTGCCTGTTCCGGATGGGTGGTGCGGCCATCCTGCTCTCCAAC
AGGCGGTCTGACAGGCGGAGGTCCAAGTATGAGCTGGTGCACACGGTGCGCACGCACAAG
GGCGCCGACGACAAGTGCTTCGGCTGCGTGACCCAGGAGGAAGATGAGATTGGCAAGATT
GGTGTGTCGCTGTCCAAGGACCTCATGGCGGTGGCCGGAGACGCGCTTAAGACCAACATC
ACCACGCTGGGGCCGTTGGTGCTCCCGTTATCAGAGCAGCTTCTCTTCATGGGCACACTG
ATTGCCAAGAAGGTGCTCAAGATGAAGATCAAGCCGTACATCCCTGACTTCAAACTGGCA
TTCGAGCACTTCTGCATCCATGCTGGTGGCCGTGCTGTGCTGGATGAGCTGGAGAAGAAC
CTGGAGCTAACTGACTGGCACATGGAGCCATCGAGGATGACCCTGTATAGGTTTGGCAAC
ACATCAAGCAGCTCACTCTGGTACGAGCTGGCATACACTGAGGCCAAGGGCAGGATCAGG
AAGCGCGACAGGATCTGGCAGATCGCGTTCGGTTCTGGATTCAAGTGCAACAGCGCCGTC
TGGAAGGCGCTCCGGACTGTGAACCCGGCCAAGGAGAAGAGCCCCTGGATGGATGAGATT
GACAACTTCCCGGTGGATGTTCCAAAGATTTCAAAGGTTGGCGGTGCTTGA

Peptide Sequence

PEP ID

EER88601
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:52071725:52075228:1 gene:SORBI_3010G181500 transcript:EER88601 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

METSAPPNAAAPPAQQPRRRLPDFQQSVRLKYVKLGYHYLISHGMYLLLSPLMALVAVQL
STVSPRDLADLWEQLRFNLLSVVACSTLLVFLSTVYFLTRPRPVYLLDFACYKPEPERKC
TRQTFMHCSNLTGSFTDDNLEFQRKILERSGLGEDTYLPPAVLRVPPNPCMDEARKEARA
VMFGAIDQLLEKTGVRPKDIGVLVVNCSLFNPTPSLSAMVVNHYKLRGNIVSYNLGGMGC
SAGLLSIDLAKDLLQVHPNSYALVISMENITLNWYFGNNRSMLVSNCLFRMGGAAILLSN
RRSDRRRSKYELVHTVRTHKGADDKCFGCVTQEEDEIGKIGVSLSKDLMAVAGDALKTNI
TTLGPLVLPLSEQLLFMGTLIAKKVLKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN
LELTDWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIRKRDRIWQIAFGSGFKCNSAV
WKALRTVNPAKEKSPWMDEIDNFPVDVPKISKVGGA

Transcript Sequence

Transcript ID

EER88601
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:52071725:52075228:1 gene:SORBI_3010G181500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCGCTCGCGGCCGCACTAGCGAGGAGATCGAGAGACAAGAGAGGGGGAAGGCGGCGGCG
GCGGCGGCGGCTTACCGGCTGAAGCCTTCTCTCCCTCCGTCGCCTCCTCCCTACCCTTCT
CTAGGAACGGCTTCTTCCTCCTGGTACGCCTGAAAACCTCCCTCGCGTCCTGATGACTCG
CCCGCGATAGATTTGGATTCTCTGCGCTTTCCAATCTGAACCACGATTTGTTGAGATCCA
CAAGTTCTTGGCTGAGATCCTGGCATTTTGGGGCTTTTCTGACGGCAATCTCTGTTGTTT
TCAGAATGGAGACGTCGGCGCCGCCCAATGCCGCCGCTCCGCCGGCGCAGCAGCCACGGA
GGCGGCTGCCGGACTTCCAGCAGTCAGTGCGGCTCAAGTATGTGAAGCTGGGGTACCACT
ACCTCATCTCCCACGGGATGTACCTGCTGCTGTCGCCGCTGATGGCGCTCGTCGCCGTGC
AGCTCTCCACCGTCTCCCCGCGCGACCTCGCCGACCTGTGGGAGCAGCTCCGCTTCAACC
TCCTCTCCGTCGTCGCCTGCTCCACGCTGCTCGTCTTCCTCTCCACCGTCTACTTCCTCA
CCCGCCCGCGCCCCGTGTACCTGCTCGACTTCGCCTGCTACAAGCCGGAGCCGGAGCGCA
AGTGCACGCGCCAGACCTTCATGCACTGCTCCAACCTCACCGGATCCTTCACGGACGACA
ACCTCGAATTCCAGCGCAAGATCCTCGAGCGCTCCGGCCTCGGCGAGGACACCTACCTTC
CCCCCGCCGTGCTCCGGGTGCCCCCCAACCCGTGCATGGACGAGGCGCGCAAGGAGGCGC
GCGCCGTCATGTTCGGCGCCATCGACCAGCTGCTCGAGAAGACCGGGGTCAGGCCCAAGG
ACATTGGCGTCCTAGTGGTCAACTGCAGCCTGTTCAACCCGACGCCGTCGCTGTCAGCCA
TGGTGGTGAACCATTACAAGCTGAGGGGGAATATTGTGAGCTACAACCTCGGCGGGATGG
GCTGCAGCGCTGGGCTGCTGTCCATTGACCTCGCCAAGGATCTGCTGCAGGTGCACCCCA
ACTCTTACGCGCTGGTGATCAGCATGGAGAACATCACACTGAATTGGTACTTCGGGAACA
ACCGGTCCATGCTCGTGTCGAATTGCCTGTTCCGGATGGGTGGTGCGGCCATCCTGCTCT
CCAACAGGCGGTCTGACAGGCGGAGGTCCAAGTATGAGCTGGTGCACACGGTGCGCACGC
ACAAGGGCGCCGACGACAAGTGCTTCGGCTGCGTGACCCAGGAGGAAGATGAGATTGGCA
AGATTGGTGTGTCGCTGTCCAAGGACCTCATGGCGGTGGCCGGAGACGCGCTTAAGACCA
ACATCACCACGCTGGGGCCGTTGGTGCTCCCGTTATCAGAGCAGCTTCTCTTCATGGGCA
CACTGATTGCCAAGAAGGTGCTCAAGATGAAGATCAAGCCGTACATCCCTGACTTCAAAC
TGGCATTCGAGCACTTCTGCATCCATGCTGGTGGCCGTGCTGTGCTGGATGAGCTGGAGA
AGAACCTGGAGCTAACTGACTGGCACATGGAGCCATCGAGGATGACCCTGTATAGGTTTG
GCAACACATCAAGCAGCTCACTCTGGTACGAGCTGGCATACACTGAGGCCAAGGGCAGGA
TCAGGAAGCGCGACAGGATCTGGCAGATCGCGTTCGGTTCTGGATTCAAGTGCAACAGCG
CCGTCTGGAAGGCGCTCCGGACTGTGAACCCGGCCAAGGAGAAGAGCCCCTGGATGGATG
AGATTGACAACTTCCCGGTGGATGTTCCAAAGATTTCAAAGGTTGGCGGTGCTTGAAGAA
CTTCCCTGGTTCTTCTTCTTAGGTGGCAAGTGGAGTTGGGGTGGTTGTCAGGGGCTGGGC
AGAGGTTTATTCCATTCCATTGTTTCCACCGTCAGTTCTTGTTTTCAGTTGTAGCATGGC
ATCTGTGAAGGAACTTGAAGTAGATGATTCGGTTAGGTAGAAAGGGTGTGATTTCTTCGG
TAGGGTCGTCTGAATGCCTGATATGTCATATTTTTTTCAGATTGGGGAAAGCAATTGATT
TTCGGTGTCGAATTCTTCGCTGCCTGATTGAGACGTTTCGATTGTAGGCCAACTGAAACT
TGAATTCCCCTATTCAATTGATTGGTTCTGTTCTAACATCTGGAGATTACCAGTGTCTTG
GATTGCAACTATAGTTTGTTATCGGGAGGTACTGAATGTGATGTGCCACTTGTGTGCTGC
TGTGACGGCGTGATTGCCCGGAATGACTTTCAGCTTGCTGGTTCTGATGTGGATCTGAGC
TTGCTTAAATGAATGATCCAGAAGGAAGAGCCTGTCAATTAAGCATTCATACTTGTAATC
AATATCCGACCTGTAACTTATTGCGTGATAGCAGCTGTAGCCTGTCTGGTTGTCTCAGCA
TTGTTTCGAATTAAAATAGAGTTGACCACTTGATCTTGGTATCACTGGATTCATTGAGGA
AAAACATCCAACAGGGTGTACACATGTATGTTTATGGTTTGTACAAGAAATCTTGTTTTG
CCAGCAAGAAAAGGTGCGCATGATGACAATGAACTTTGGCCATGGAATGATGGAACACTC
ACACCAATCCAGCCTGCAGCTGCAGGCAAGTGTGCCCTGCAGTTAGGGGGTGAGGTCCCC
GTGCTCCGCATCCGGCCAGTTCGTGTAGCTGCCTGATGCGCGCCTGTCTTTCCTTCTGTG
GCTGCAGAAGCCCAAGCGCTCAGCTCCACTTGCCAACCACATCCTGAATTCCTGATGAAC
CCCTCCGTGGTCCATGCAGCGATGTTCCTCCTGCGTGTGCACTGCTGTGCGCCTGCACTG
GAACGGACTCAGCATGAAACGGAGTTTTCCGTTTCCTGTTGCAGACAGGCAGGCAGGCAG
AAGCCTACAACGTCCTGTGACACTGGCACCACGTGAGGATGAGGCCAAAGCACTGATACA
AGATCACAATTGCAAGACCGTCCTTTGCAGTACCGCGCAATTTTTTTTTCTTTTTTAGAA
AACCATTTGCAGTGCGCGTTAGTTAGATCTGAGGTTCTGAACCAACCAACCATGGTCCGT
TACAGCAGCAGTTTGGAGCAGAAATTCCCGTGTCTCTGCTGGACGTAACGATTATTAAAA
ACGAAGACTTCTAACAGTACCAGTGGCACAGCTGGTGCCAATCATGAGGCGGCCATGAAA
GCATGAACAGCAACAGGTCTCAACAGTAAGCTGTAAGTAATTCCACATGGACGCTGCAGC
CTGAAACCATCGCAGAAAGGCCGATCAAATGCAATCAACCAAGGTTTGGCTCACATGGCG
GGGCATGTGACGCGATTCCCTGTGCGAAAGCAGCGACGAGGGATGGAGTCTTTGCTGGAA
AACGCAACATGCGCCAGTGCCATATCCCAGATGTCCTCTGGGAAAAGTCGTCTTTATGGG
ATACCTAAACCAATCATGAATTTC