Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88530
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:49959346:49964179:1 gene:SORBI_3010G169300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTCGCCTTCGACGAGTTCGGGCGCCCCTTCATCATACTCAGGGAGCAGGAGAAG
AAGACGCGCCTGCGCGGGCTCGACGCGCAGAAGGCCAACATCGCCGCCGGCAAGGCCGTG
GCGCGGATCCTCCGCACCTCGCTCGGACCCAAGGGCATGGACAAGATGCTCCAGTCCCCC
GACGGAGACGTCACCATCACAAATGATGGGGCCACGATTCTGGAGCAGATGGATGTTGAC
AACCAGATTGCAAAGCTGATGGTGGAGCTGTCCCGCAGTCAAGACTATGAGATCGGGGAT
GGTACCACTGGGGTGGTGGTCATGGCAGGGGCACTTCTAGAGCAGGCTGAGAAACTTCTG
GAGCGTGGTATTCACCCGATACGGGTTGCCGAAGGTTATGAGATGGCTTCAAGGGTAGCT
TTTGATCACCTTGAGCGCATCTCCCAAAAGTTTGAATTCAATGCAGACAATATAGAGCCA
CTGGTTCAGACCTGCATGACGACTCTGTCGTCAAAGATTGTTCACCGTTGCAAGCGGGCA
CTCGCAGAGATTGCTGTCAAAGCAGTCCTTGCGGTTGCTGATTTGGGCAGGAAGGATGTT
AACTTGGATTTAATCAAAGTAGAAGGCAAGGTCGGTGGGAAGCTGGAGGACACAGAACTA
ATATATGGAATTGTCGTTGACAAAGATATGAGCCACCCTCAAATGCCAAAGAGAATTGAG
GATGCTAAGATAGCCATCCTGACCTGCCCATTTGAGCCCCCGAAACCTAAGACAAAGCAT
AAGGTTGACATTGATACTGTAGAGAAATTCCAGACTCTGCGTGAGCAAGAGCAGAAGTAC
TTTGATGAAATGGTTCAGAAATGCAAGGATGTTGGTGCAACCCTGGTTATTTGTCAATGG
GGTTTTGATGATGAAGCCAATCATCTATTGATGCATAGAAATCTGCCAGCTGTCAGATGG
GTTGGTGGTGTTGAATTGGAATTGATTGCCATCGCTACAGGAGGACGGATTGTTCCAAGA
TTTCAAGAGCTGAGTCCAGAAAAGCTTGGGAAGGCTGGATTAGTCAGAGAGAAGTCATTT
GGAACAACCAAGGACCGGATGCTTTACATTGAGCAGTGTGCCAACTCCAGAGCTGTAACT
ATTTTCATTCGTGGTGGAAATAAAATGATGATTGAGGAGACCAAGCGCAGTCTTCATGAT
GCTCTTTGTGTGGCAAGGAATCTAATCCGCAATAACTCAATTGTGTATGGTGGTGGCTCG
GCAGAGATATCTTGCTCAATTGCTGTTGAAACTGCAGCAGATCGGCACCCTGGAGTTGAG
CAGTATGCTATCAGGTCATTTGCTGATGCATTGGACGCTGTTCCACTGGCCTTAGCTGAG
AACAGTGGTTTGCCTCCTATTGATACCTTAACTGTGGTGAAAGCTCAACAAGTGAAGGAT
AGCAACCCCCATTGTGGCATAGATTGCAATGACGTTGGCACCAATGACATGAAAGAGCAG
AACGTCTTTGAGACCCTGATTGGCAAGCAGCAACAGATCTTACTTGCCACGCAGGTGGTG
AAGATGATCCTCAAGATTGACGACGTGATCTCGCCATCTGAGTACTGA

Peptide Sequence

PEP ID

EER88530
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:49959346:49964179:1 gene:SORBI_3010G169300 transcript:EER88530 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALAFDEFGRPFIILREQEKKTRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSP
DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAEKLL
ERGIHPIRVAEGYEMASRVAFDHLERISQKFEFNADNIEPLVQTCMTTLSSKIVHRCKRA
LAEIAVKAVLAVADLGRKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKRIE
DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLREQEQKYFDEMVQKCKDVGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGLVREKSF
GTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGS
AEISCSIAVETAADRHPGVEQYAIRSFADALDAVPLALAENSGLPPIDTLTVVKAQQVKD
SNPHCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY

Transcript Sequence

Transcript ID

EER88530
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:49959346:49964179:1 gene:SORBI_3010G169300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGAGTAGTAGGTTCTCGAAACACCGCCACACTCCGCCTCTCTTCGACCGCTCCACGCGAG
CACCTCGGCTCCTGCCTGCATCCGCGCCGCCGCTTCCCTTGCTCGCCTCCGCCTTCTGGA
GCGAGCGGCACCGCGCTAGCGGCAGCCATGGCGCTCGCCTTCGACGAGTTCGGGCGCCCC
TTCATCATACTCAGGGAGCAGGAGAAGAAGACGCGCCTGCGCGGGCTCGACGCGCAGAAG
GCCAACATCGCCGCCGGCAAGGCCGTGGCGCGGATCCTCCGCACCTCGCTCGGACCCAAG
GGCATGGACAAGATGCTCCAGTCCCCCGACGGAGACGTCACCATCACAAATGATGGGGCC
ACGATTCTGGAGCAGATGGATGTTGACAACCAGATTGCAAAGCTGATGGTGGAGCTGTCC
CGCAGTCAAGACTATGAGATCGGGGATGGTACCACTGGGGTGGTGGTCATGGCAGGGGCA
CTTCTAGAGCAGGCTGAGAAACTTCTGGAGCGTGGTATTCACCCGATACGGGTTGCCGAA
GGTTATGAGATGGCTTCAAGGGTAGCTTTTGATCACCTTGAGCGCATCTCCCAAAAGTTT
GAATTCAATGCAGACAATATAGAGCCACTGGTTCAGACCTGCATGACGACTCTGTCGTCA
AAGATTGTTCACCGTTGCAAGCGGGCACTCGCAGAGATTGCTGTCAAAGCAGTCCTTGCG
GTTGCTGATTTGGGCAGGAAGGATGTTAACTTGGATTTAATCAAAGTAGAAGGCAAGGTC
GGTGGGAAGCTGGAGGACACAGAACTAATATATGGAATTGTCGTTGACAAAGATATGAGC
CACCCTCAAATGCCAAAGAGAATTGAGGATGCTAAGATAGCCATCCTGACCTGCCCATTT
GAGCCCCCGAAACCTAAGACAAAGCATAAGGTTGACATTGATACTGTAGAGAAATTCCAG
ACTCTGCGTGAGCAAGAGCAGAAGTACTTTGATGAAATGGTTCAGAAATGCAAGGATGTT
GGTGCAACCCTGGTTATTTGTCAATGGGGTTTTGATGATGAAGCCAATCATCTATTGATG
CATAGAAATCTGCCAGCTGTCAGATGGGTTGGTGGTGTTGAATTGGAATTGATTGCCATC
GCTACAGGAGGACGGATTGTTCCAAGATTTCAAGAGCTGAGTCCAGAAAAGCTTGGGAAG
GCTGGATTAGTCAGAGAGAAGTCATTTGGAACAACCAAGGACCGGATGCTTTACATTGAG
CAGTGTGCCAACTCCAGAGCTGTAACTATTTTCATTCGTGGTGGAAATAAAATGATGATT
GAGGAGACCAAGCGCAGTCTTCATGATGCTCTTTGTGTGGCAAGGAATCTAATCCGCAAT
AACTCAATTGTGTATGGTGGTGGCTCGGCAGAGATATCTTGCTCAATTGCTGTTGAAACT
GCAGCAGATCGGCACCCTGGAGTTGAGCAGTATGCTATCAGGTCATTTGCTGATGCATTG
GACGCTGTTCCACTGGCCTTAGCTGAGAACAGTGGTTTGCCTCCTATTGATACCTTAACT
GTGGTGAAAGCTCAACAAGTGAAGGATAGCAACCCCCATTGTGGCATAGATTGCAATGAC
GTTGGCACCAATGACATGAAAGAGCAGAACGTCTTTGAGACCCTGATTGGCAAGCAGCAA
CAGATCTTACTTGCCACGCAGGTGGTGAAGATGATCCTCAAGATTGACGACGTGATCTCG
CCATCTGAGTACTGATGAAGCCTGGGAAAGAATAGACAGCTGTGCTTGGTGACAATTAGG
CGTCAGAGACTCAGAGGGGCTGGTGGCTTCGATTTGTGAACGGCGCCGTGGTTTAAAAGG
CAAAAACCATTCCATATGCTGTGCGGTTAATTTGCCGTGCCAATGATGGTACCTAAAGAA
GTTAGCTGCTGCAGCTGCGCGCACACTCTTAGCACTTAGCAGAGCACTATACAGATTCAA
TGATGCGCTAGCTACCTTTGTTGAGTAAATTCTAATGTCACTAAAATTTATAAGGCTTTC
TTTAATGTCTTGAAAATTGTTCATTTTCCACGAATACCATTATGTGAATTTTGTGATTCT
TGCTGTCGTTTCATCGTGTACCGTGAAATAATGGGTCCCTGACTATATCGGCCTACAGGA
TGAGGTCTATCCATCAAATAGCATGGATCACCATGCAGTTACGCCGATTAGCAACATTGA
GAAATAGTGAGCGCGGGGCGGAAGAATTAGTTCGTTATCCGGTGTGAAAAGAGAGGTGGA
GAAAAAAGGGAAAAAA