Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88427
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:44032883:44039100:1 gene:SORBI_3010G151700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAAGGCGAGGCGGCGGCGGCGGCGGCCGAGGCGGTGGCGCGGATACGGCTGGTGCGG
TGCCCCAAGTGCGACAAGTTCTTACCGGAACTGCCTGCCTACTCCGTCTACGTCTGCGGC
GGATGCGGCGCCACCCTCCAAGCAAAGAAGAAGAATTCAGCCCAATCGTCACATGACGCT
GACAATGGAAATGTGAAATACCTTGAAGTACTGGAGCGTGTTCCAGAGGCATCTGCAAGA
AAACATGGAGCTAGTACTACTGATAGGTCAGAAACCAGTAAAATGGCAGATGTACATATC
AAACAAGTTTATTATGGCCATCACGATAGCATTCAGACTGGGCCAAGTCCCTCAAATCTG
AACGCTTCTATTAGAGATGATGGCAAGGAGGCAAAGTACCGACACATTCGTTATTGGGAG
AATGGTGAAATGGGGCAATCATTGAGAGTAAGAGACATGTCCCCAAAGTCACCAGCCAAT
GCTTATCAGGGTGAGTGCCATTCGAAGCTGAGGTACAACTATTCTGCTAAGGAATGCCCA
GGTGAAAGAAATTTGGATGGTCCAAGCAGAGTGAGGGGGCTTGAGAAAGACCGCACTGAG
ATCTTAAGGATGCTTGATGAGTTGAGAGACCAGGTACAGCAATCTTGCGATGCAACTAAT
GGGCCAAGTGGAAGTGCCCCAACTACTACAGCAGCAGATTCCCACATTTCATATGGTACT
TCTGACCGATTGAATCAATTGAGGCATATTCCACCACAATTGCATCGGAATGATTCACAT
CACACCCCATCATTGAATGTACAAAGTCCTAGTGTTTCTCGTGTTTATGCTCCCCTGCCT
GCACAACAAGATTGTGTCGGATATGCAGAGCTCATTTCACATGCTAGACGCTCTAGCTAT
CCTGCCAGCCTCTATCCATGGAGAAATTTTGATAATTATTTCTTTGGACAGCATGATCCT
GATTCTCTTCTCTCTTGCCGCCATGATGGCTTCTATCACCAAGCTGCCTGTTCTTGCTTG
CATTGTTGCCACCAAGAATTCTTGCCTGTACAGGGAAATCACATGGGCTTCAATGATCAA
AGGGCACCATATCTTCTGAACGGTTATGGGGCTTATCCTGTGGACAGTCCCTTACTTGGT
CAGCAAAGATACAGTAGAAGAGCCATCAATACTACCTTGCAGCAGAATCACATGAGGGTC
AACGTTAGCAAGAAGCCTGCACAGACTTGTGAGCCGGTCGCAGGTGGTGCCCCTTTCACC
ATATGCTGCAATTGCTATGAAGTTCTGCAGATACCAAGGAAACAGTCCCTGTCAGGAAAT
GAGTACAAATTGCGTTGTGGATCATGCTCACATGCAATTCTAGTCAAGCTTGATGGAAAC
AGGCTCAATGTATCAGAAATTGCACTAGGTACACATTTATCTGATGGACAGGAAAATGAC
ATGGGAACCGATGGGCAAACTCCGGACAATAGGTCCATTCCAGCTTATCGTTTTTCTGTT
GGAAGTCCTGCATCTCAAGAAAAAGACCTGCACTCAAATTTGAGTGAGTCAGAGAACAAC
CATACCCCTCTAGCAACTGACTCAGAGGGCACTTCCCAGTCCAGGGATCTTCCTCCTGAA
GACAGTGCAGTTTCCCATGTACCAAACTTACCACATCGTAGTCATTCTGGATCATCTCCA
TCAGAACATTCTGGAGTGGGAAGTAGAAGTACACATTCTGAACCTGAAAAAGTTATACCA
TTAACTGAAACTTCCAAGCAGAATTCAGTTAAAGGTATATGTGTATCAAACAAGATGCAA
TCTCCAAACAATGAGTTTGATGTTACTGAATACACAGATGATACATTAAATGCGCAGCAA
GATACTGAGCACCCTAAAGCAACAAAGGACAACAATTCTTTTCTCACTAATCTGATAAAA
AAGAGCTTCAAAATTAATAATGGAATGCGCAACGGAAGAGCAAGGATTTATGTAAATGGC
TTTCCTATCTCTGATCGTGCGGTCAGGAAGGCTGAGAAGCTAGCTGGATCAATCTGCCCT
GGAAACTATTGGTATGACTACCATGCTGGGTTCTGGGGTGTTATGGGACGTCCCTGCCTT
GGCATGATACCACCTTATATTCCAGAATTTAATTTCCCCATGCCCAAGAACTGTGCTGGC
GGAAACACAGGCGTATTTGTTAATGGAAGAGAACTTCACCAGAAGGATTTGGATTTACTT
GTCACTAGAGGACTCTCTGATTCCCCTGGTAGATCTTATGTAGTTGAAAATTCTGGAAAG
GTTTCAGATGAAGTATCTGGTGAAGAACTTTATGGCCTTGGAAAACTTGCACCAACAGTT
GAGAAAATGGGGCGTGGATTTGGCATGCGCGTCCCAAGGTTCATCCAGTGA

Peptide Sequence

PEP ID

EER88427
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:44032883:44039100:1 gene:SORBI_3010G151700 transcript:EER88427 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEGEAAAAAAEAVARIRLVRCPKCDKFLPELPAYSVYVCGGCGATLQAKKKNSAQSSHDA
DNGNVKYLEVLERVPEASARKHGASTTDRSETSKMADVHIKQVYYGHHDSIQTGPSPSNL
NASIRDDGKEAKYRHIRYWENGEMGQSLRVRDMSPKSPANAYQGECHSKLRYNYSAKECP
GERNLDGPSRVRGLEKDRTEILRMLDELRDQVQQSCDATNGPSGSAPTTTAADSHISYGT
SDRLNQLRHIPPQLHRNDSHHTPSLNVQSPSVSRVYAPLPAQQDCVGYAELISHARRSSY
PASLYPWRNFDNYFFGQHDPDSLLSCRHDGFYHQAACSCLHCCHQEFLPVQGNHMGFNDQ
RAPYLLNGYGAYPVDSPLLGQQRYSRRAINTTLQQNHMRVNVSKKPAQTCEPVAGGAPFT
ICCNCYEVLQIPRKQSLSGNEYKLRCGSCSHAILVKLDGNRLNVSEIALGTHLSDGQEND
MGTDGQTPDNRSIPAYRFSVGSPASQEKDLHSNLSESENNHTPLATDSEGTSQSRDLPPE
DSAVSHVPNLPHRSHSGSSPSEHSGVGSRSTHSEPEKVIPLTETSKQNSVKGICVSNKMQ
SPNNEFDVTEYTDDTLNAQQDTEHPKATKDNNSFLTNLIKKSFKINNGMRNGRARIYVNG
FPISDRAVRKAEKLAGSICPGNYWYDYHAGFWGVMGRPCLGMIPPYIPEFNFPMPKNCAG
GNTGVFVNGRELHQKDLDLLVTRGLSDSPGRSYVVENSGKVSDEVSGEELYGLGKLAPTV
EKMGRGFGMRVPRFIQ

Transcript Sequence

Transcript ID

EER88427
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:44032883:44039100:1 gene:SORBI_3010G151700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCCGTGCGCACGCAAGGCTCCTCCTCCTCGTCTCGTCGTCGCCGAGCGAGAGACGAAAG
CCGCAGTCCGCAGAGCAGCGGCGGCAGCGGGAAAAGCTGCATGTCCGAGTCAGAGAGATG
CCATGGCCCCGTGACGAGCCAAATTAAATTCGCACCCACCTGACCTCCCTCCCTCCCTCG
CTCTCTGGCTGCACTTTTCCCTCCTCACCTCCACCACCTCCGGGCACCAGCCCGCGCTGC
TCTCTGCCTCTCTCCTGTCCCCGGCTTCAGCAGTTCAGCTCCTTCACCTACACACCACAC
GGACGACCTCCTCGCTGCGGTTGCTCCGTCCGGTGGCCAGGCCGCGGTTCTTGGCGCTCT
TGGTTGGTCGGATCCCTTGATACCAGACGGCTCTGCGTCCACCTTTAACTTCTTGGGGGA
TTCTTGAGCGTCACCTTCCTGTTTGTTTCTTGGGTTGATGCGGTCCCGGCGGCGGCAACT
GTTCTTATGACTGGAGGGGCCAAGGAGGTGGAACTTTTCCGTTGAGGGGGAGAACCGAAC
CGAGGGAATGGAAGGCGAGGCGGCGGCGGCGGCGGCCGAGGCGGTGGCGCGGATACGGCT
GGTGCGGTGCCCCAAGTGCGACAAGTTCTTACCGGAACTGCCTGCCTACTCCGTCTACGT
CTGCGGCGGATGCGGCGCCACCCTCCAAGCAAAGAAGAAGAATTCAGCCCAATCGTCACA
TGACGCTGACAATGGAAATGTGAAATACCTTGAAGTACTGGAGCGTGTTCCAGAGGCATC
TGCAAGAAAACATGGAGCTAGTACTACTGATAGGTCAGAAACCAGTAAAATGGCAGATGT
ACATATCAAACAAGTTTATTATGGCCATCACGATAGCATTCAGACTGGGCCAAGTCCCTC
AAATCTGAACGCTTCTATTAGAGATGATGGCAAGGAGGCAAAGTACCGACACATTCGTTA
TTGGGAGAATGGTGAAATGGGGCAATCATTGAGAGTAAGAGACATGTCCCCAAAGTCACC
AGCCAATGCTTATCAGGGTGAGTGCCATTCGAAGCTGAGGTACAACTATTCTGCTAAGGA
ATGCCCAGGTGAAAGAAATTTGGATGGTCCAAGCAGAGTGAGGGGGCTTGAGAAAGACCG
CACTGAGATCTTAAGGATGCTTGATGAGTTGAGAGACCAGGTACAGCAATCTTGCGATGC
AACTAATGGGCCAAGTGGAAGTGCCCCAACTACTACAGCAGCAGATTCCCACATTTCATA
TGGTACTTCTGACCGATTGAATCAATTGAGGCATATTCCACCACAATTGCATCGGAATGA
TTCACATCACACCCCATCATTGAATGTACAAAGTCCTAGTGTTTCTCGTGTTTATGCTCC
CCTGCCTGCACAACAAGATTGTGTCGGATATGCAGAGCTCATTTCACATGCTAGACGCTC
TAGCTATCCTGCCAGCCTCTATCCATGGAGAAATTTTGATAATTATTTCTTTGGACAGCA
TGATCCTGATTCTCTTCTCTCTTGCCGCCATGATGGCTTCTATCACCAAGCTGCCTGTTC
TTGCTTGCATTGTTGCCACCAAGAATTCTTGCCTGTACAGGGAAATCACATGGGCTTCAA
TGATCAAAGGGCACCATATCTTCTGAACGGTTATGGGGCTTATCCTGTGGACAGTCCCTT
ACTTGGTCAGCAAAGATACAGTAGAAGAGCCATCAATACTACCTTGCAGCAGAATCACAT
GAGGGTCAACGTTAGCAAGAAGCCTGCACAGACTTGTGAGCCGGTCGCAGGTGGTGCCCC
TTTCACCATATGCTGCAATTGCTATGAAGTTCTGCAGATACCAAGGAAACAGTCCCTGTC
AGGAAATGAGTACAAATTGCGTTGTGGATCATGCTCACATGCAATTCTAGTCAAGCTTGA
TGGAAACAGGCTCAATGTATCAGAAATTGCACTAGGTACACATTTATCTGATGGACAGGA
AAATGACATGGGAACCGATGGGCAAACTCCGGACAATAGGTCCATTCCAGCTTATCGTTT
TTCTGTTGGAAGTCCTGCATCTCAAGAAAAAGACCTGCACTCAAATTTGAGTGAGTCAGA
GAACAACCATACCCCTCTAGCAACTGACTCAGAGGGCACTTCCCAGTCCAGGGATCTTCC
TCCTGAAGACAGTGCAGTTTCCCATGTACCAAACTTACCACATCGTAGTCATTCTGGATC
ATCTCCATCAGAACATTCTGGAGTGGGAAGTAGAAGTACACATTCTGAACCTGAAAAAGT
TATACCATTAACTGAAACTTCCAAGCAGAATTCAGTTAAAGGTATATGTGTATCAAACAA
GATGCAATCTCCAAACAATGAGTTTGATGTTACTGAATACACAGATGATACATTAAATGC
GCAGCAAGATACTGAGCACCCTAAAGCAACAAAGGACAACAATTCTTTTCTCACTAATCT
GATAAAAAAGAGCTTCAAAATTAATAATGGAATGCGCAACGGAAGAGCAAGGATTTATGT
AAATGGCTTTCCTATCTCTGATCGTGCGGTCAGGAAGGCTGAGAAGCTAGCTGGATCAAT
CTGCCCTGGAAACTATTGGTATGACTACCATGCTGGGTTCTGGGGTGTTATGGGACGTCC
CTGCCTTGGCATGATACCACCTTATATTCCAGAATTTAATTTCCCCATGCCCAAGAACTG
TGCTGGCGGAAACACAGGCGTATTTGTTAATGGAAGAGAACTTCACCAGAAGGATTTGGA
TTTACTTGTCACTAGAGGACTCTCTGATTCCCCTGGTAGATCTTATGTAGTTGAAAATTC
TGGAAAGGTTTCAGATGAAGTATCTGGTGAAGAACTTTATGGCCTTGGAAAACTTGCACC
AACAGTTGAGAAAATGGGGCGTGGATTTGGCATGCGCGTCCCAAGGTTCATCCAGTGACA
GGTCAGCTTGGCACATCTAAACTTCTGAACCTCGAAGGCAAATCGATGGAGATAATTCAG
ATCTACTGTAGGTTACTTCAATTGTGAAGCTAGTTTCATGTATCTTTCTTTTTCCTGATT
ATATTCCGATTAACATGAGGCCTAGTTCAGTCAAGTTGAGGTTTTCTTGTAATTTTCTGA
TGCATTTGTTTTTACTGAAAATTTTCCTTTTTCATTTACATGTTATGCAAGAACAATTTG
AAGCATTTACCTAATTGAATCGTATGAATTGTATCA