Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88393
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:38889320:38892694:1 gene:SORBI_3010G144400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGTCCGGCGAGCGGCCGAAGCTGGTGCGGGGCCTCCGGCAGGAGTCTCGGCGGTTC
CGCCTGCTAGTCATCGTCGTCGGATTCTTCCTCGTCTCCCTGACCTTCGTCGTCATCTCC
AAGCCCGACGCCATCCTATTCAGCCTGAACGGCAAGCTACCGGTGGACCAGGCGCCGACA
TCCATCCTGATCCAGCAGAAGGTTAACTCGCCCCCAGCCACCACGGTTAAGACCTCCACC
GACGCACTCCGTGGAGACCCTAGAGTGGTTGATGACGAAGCTGATCCAAGACCGCAAGGG
TTCAAAGGCGAGGAGGAAGAGAGCCGGGTCCTGAGCGAGCCGGACCCGACCAGCGGGATG
ACGGAGCTGACCCCTAACAAGGACGGCAGCGGCCGTAAATCCGACGAGGATAAGTTAGGC
GGCGGCGGTGACGGCGAGGGGAAAAGGAGGGAGGAGCGTGGGCACGAGGCGGACAAGCAT
AAAGTCACGCTCCCAACCGTTTCCAATTACACTATTCATGACACCGAGGACACGGAAACT
GCCAAAAAAGATGATACAAGTTATGACCAGCAGGGGAGCAAGCCCCTGTGTGATTTCTCA
AATTTTAGAGCAAATGTGTGCGAGATGCGTGGTGATGTTAGAGTTCACCCAAATGCTACA
GAAATCATGTTCATGGAGCCTGGCCATTCGCAGAGAGATGAGCTGTGGAAAATTAAGCCA
TACCCTCGGAAAGGAGACGAGTTCTGCCTTAGCCATATCACTGAGCTGACAGTAAAATCA
AGCAAAGTGGCCCCAGAGTGCACCAAGTACCATGACATGCCTGCTGTGATCTTTTCCCTG
ACAGGCTATACTGGAAATCTGTTCCATGACTTCACTGACGTGATGGTCCCTCTTTTCACG
ACAGCAAGTGAGTTTAATGGAGAAGTTCAGTTCCTTATAACGGACATGGCACTTTGGTGG
ACAATCAAGTACCACACTGTGCTTCAGAAGCTGTCCAAGTACCCTGTCATTGATTTCAGC
AAGGATGACCAGGTGCACTGCTTCAAGCATGTCATTGTCGGCCTCCATGCTTACATGGAA
TTCACGATAGACTCGTCGAAGGCTCCACACAACTATTCAATGGTTGATTTTAACAGATTC
ATGCGCGGAGCTTACTCACTGGGCAGGGACACCGTTACCGTGCTTGGAGAGTACCCTAAG
GTCAAGCCAAGGTTGCTCATCATCAAGAGGCACCGTACAAGGATGTTCCTTAACCTTGAT
GAGATCGTTGCAATGGCTGAGGAGCTCGGCTTTGAGGTGGTTATCGATGAGGCCAATGTG
AGCTCTGATATCTCCAAGTTCGCCAGGCTGGTTAACACGGTGGACGTTATGATGGGTGTC
CATGGAGCTGGGCTTACAAACTGCGTGTTCTTGCCACAGAATGCCACACTGATTCAGATT
GTGCCGTGGGGAGGGTTGGAATGGGTATCCCGTACTGATTTCGGCAACCCGGCAGAGCTG
ATGGGGCTGCACTACAAGCAATACAGCATCGGCGTGGACGAGAGCAGCCTCACGGAGCAA
TATCCGAGGGACCATGAGATCTTCAAGAATCCTATTGCTTTCCATAAGAACGGGTTTGAC
TTCATCAGGCAAACCTTCATGGACAAGCAAAACGTGAAGCTGGATTGCAAGAGGTTCAGG
CCTATTCTATTGGAGGCACTGGATAACCTCAACCCATAA

Peptide Sequence

PEP ID

EER88393
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:38889320:38892694:1 gene:SORBI_3010G144400 transcript:EER88393 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKSGERPKLVRGLRQESRRFRLLVIVVGFFLVSLTFVVISKPDAILFSLNGKLPVDQAPT
SILIQQKVNSPPATTVKTSTDALRGDPRVVDDEADPRPQGFKGEEEESRVLSEPDPTSGM
TELTPNKDGSGRKSDEDKLGGGGDGEGKRREERGHEADKHKVTLPTVSNYTIHDTEDTET
AKKDDTSYDQQGSKPLCDFSNFRANVCEMRGDVRVHPNATEIMFMEPGHSQRDELWKIKP
YPRKGDEFCLSHITELTVKSSKVAPECTKYHDMPAVIFSLTGYTGNLFHDFTDVMVPLFT
TASEFNGEVQFLITDMALWWTIKYHTVLQKLSKYPVIDFSKDDQVHCFKHVIVGLHAYME
FTIDSSKAPHNYSMVDFNRFMRGAYSLGRDTVTVLGEYPKVKPRLLIIKRHRTRMFLNLD
EIVAMAEELGFEVVIDEANVSSDISKFARLVNTVDVMMGVHGAGLTNCVFLPQNATLIQI
VPWGGLEWVSRTDFGNPAELMGLHYKQYSIGVDESSLTEQYPRDHEIFKNPIAFHKNGFD
FIRQTFMDKQNVKLDCKRFRPILLEALDNLNP

Transcript Sequence

Transcript ID

EER88393
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:38889320:38892694:1 gene:SORBI_3010G144400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCCACCTCCCAGTCTCCCACAGTCGCCTCCGCGGCGGCCCTCTGGTCAGAGGCGCACAT
AGATAGAGGGGAACCGGGCAACCGGCACACGCAGGAAGCCAAGTAGCCTGCCCTCAGCCC
CTGACTGCGTCTTCTTGCTTCCTCCTGTGCTTCGTTTCTTTGACACACCGGCGGCGGGGC
CGGTTCTTATCGTCCCTCGCTCTCTTCTTGGGTTGCTGCACGCCTCTATTCCTATTCTCG
GGTTGGGCGGGGCCAAGAAGTGGAGAAGGGCAGGATGAAGTCCGGCGAGCGGCCGAAGCT
GGTGCGGGGCCTCCGGCAGGAGTCTCGGCGGTTCCGCCTGCTAGTCATCGTCGTCGGATT
CTTCCTCGTCTCCCTGACCTTCGTCGTCATCTCCAAGCCCGACGCCATCCTATTCAGCCT
GAACGGCAAGCTACCGGTGGACCAGGCGCCGACATCCATCCTGATCCAGCAGAAGGTTAA
CTCGCCCCCAGCCACCACGGTTAAGACCTCCACCGACGCACTCCGTGGAGACCCTAGAGT
GGTTGATGACGAAGCTGATCCAAGACCGCAAGGGTTCAAAGGCGAGGAGGAAGAGAGCCG
GGTCCTGAGCGAGCCGGACCCGACCAGCGGGATGACGGAGCTGACCCCTAACAAGGACGG
CAGCGGCCGTAAATCCGACGAGGATAAGTTAGGCGGCGGCGGTGACGGCGAGGGGAAAAG
GAGGGAGGAGCGTGGGCACGAGGCGGACAAGCATAAAGTCACGCTCCCAACCGTTTCCAA
TTACACTATTCATGACACCGAGGACACGGAAACTGCCAAAAAAGATGATACAAGTTATGA
CCAGCAGGGGAGCAAGCCCCTGTGTGATTTCTCAAATTTTAGAGCAAATGTGTGCGAGAT
GCGTGGTGATGTTAGAGTTCACCCAAATGCTACAGAAATCATGTTCATGGAGCCTGGCCA
TTCGCAGAGAGATGAGCTGTGGAAAATTAAGCCATACCCTCGGAAAGGAGACGAGTTCTG
CCTTAGCCATATCACTGAGCTGACAGTAAAATCAAGCAAAGTGGCCCCAGAGTGCACCAA
GTACCATGACATGCCTGCTGTGATCTTTTCCCTGACAGGCTATACTGGAAATCTGTTCCA
TGACTTCACTGACGTGATGGTCCCTCTTTTCACGACAGCAAGTGAGTTTAATGGAGAAGT
TCAGTTCCTTATAACGGACATGGCACTTTGGTGGACAATCAAGTACCACACTGTGCTTCA
GAAGCTGTCCAAGTACCCTGTCATTGATTTCAGCAAGGATGACCAGGTGCACTGCTTCAA
GCATGTCATTGTCGGCCTCCATGCTTACATGGAATTCACGATAGACTCGTCGAAGGCTCC
ACACAACTATTCAATGGTTGATTTTAACAGATTCATGCGCGGAGCTTACTCACTGGGCAG
GGACACCGTTACCGTGCTTGGAGAGTACCCTAAGGTCAAGCCAAGGTTGCTCATCATCAA
GAGGCACCGTACAAGGATGTTCCTTAACCTTGATGAGATCGTTGCAATGGCTGAGGAGCT
CGGCTTTGAGGTGGTTATCGATGAGGCCAATGTGAGCTCTGATATCTCCAAGTTCGCCAG
GCTGGTTAACACGGTGGACGTTATGATGGGTGTCCATGGAGCTGGGCTTACAAACTGCGT
GTTCTTGCCACAGAATGCCACACTGATTCAGATTGTGCCGTGGGGAGGGTTGGAATGGGT
ATCCCGTACTGATTTCGGCAACCCGGCAGAGCTGATGGGGCTGCACTACAAGCAATACAG
CATCGGCGTGGACGAGAGCAGCCTCACGGAGCAATATCCGAGGGACCATGAGATCTTCAA
GAATCCTATTGCTTTCCATAAGAACGGGTTTGACTTCATCAGGCAAACCTTCATGGACAA
GCAAAACGTGAAGCTGGATTGCAAGAGGTTCAGGCCTATTCTATTGGAGGCACTGGATAA
CCTCAACCCATAAAGGCCATAAAGATTGTGATCAGTTGGTTGTTGAGCATAGCAATATGG
ATTACTGTATACAATTCATTTTCCCCCATTCACCATTCGTTCCTTTTAGTGCTCTTGTTC
GTTCTGTCCCTGCCTGAGAAGGCCCGCATTGTGGAAATTTTAGGGAAAAAAAGCTGTGTT
TACTGTGTACACTGTATAAATTGCTGCCGGTGCAATGGTGGAACGAAATATTACTATTAT
TAATTAGGGGCTCTAAGTCTCTAACACAGTTCCACGTT