Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88253
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:13561901:13564731:1 gene:SORBI_3010G119300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCGCGCTCCTCCGTTTATTGCCGTTCTTGCTGCTAGCACTGACGGCGCCACCC
GCTACCGCCGCTGCAGCTGTTTTAACACCGGCGGCGGCCAAGAACGTCACGCTCGACTCT
GCCACACTGTCCTTCGCGGACCTCACGCTGCTGGGTGACTCCTTCCTCCGCAACGGCTCC
GTCGGGCTCACGCGGGAGACCGGCGTGCCTTCCTCCAGCGCCGGCACCGTCCTCTGCACC
CAGCCCGTCGCGTTCCGGGGCCCCGGCGCGACGGCCTCCAACGCCACCGCCGTCGCGTCG
TTCGCGGCCAGGTTCTCCTTCGTCATCGCCAACCCCAACCCCGGCGCCGCGGGAGGCGAC
GGCATCGCGTTCTTCATCTCCCCCGGCCCCGCCACGCTCGGCGCCACCGGTGGCTACCTC
GGCCTCTTCAACTCCTCCGACTACGCCGTAGCCAAGAACGGGTCCGCGTCCGCCGCCATC
GTCGCCGTCGAGTTCGACACTATGGCCAACCCGGAGTTCGCCGACCCCAGCGACAACCAC
GTCGGCCTGGACCTCGGCTCGCCGCTCTCCGTGGCCACGGTCGACCTCGCCGCGTCCGGT
GTCGACCTCAAAAGCGGCAACCTCACGACGGCGTGGATCGACTACCGCAGCGGGGACCGC
CGCCTGGAGGTGTTCCTGAGCTACGCCGTGGCCACCAAGCCGAAGCGGCCGGTCCTCTCC
GTCGCCGTCGACCTCTCGCCGTACCTCAAGGAGGCCATGTACGTCGGCTTCTCGGCGTCC
ACGGAGGGAAGCACCCAGCAGCACACCATCAAAGAGTGGACCTTCCAGACGTTCGGCTTC
CCGCCCACGGCCAACTCCTCCTTTGAATCCAATGCCACCAGCAACTCGTCAGAGCCGGCC
ACCGTGCCAGTCTCCAACGCCGCCAACAGCCACAAGAGGGTCGGGCTCGCGCTCGGAATC
CTCGGTCCCGTCGCGCTCGCCGTCGCCTTCGTGTTCTTCGCCTGGGTCTCCATCAAGAAG
CTCATACAACTCACCTCCCGGAACGACGCCGCTTTCTCGCCCGAGCTGCTCAAGGGCCCG
AGGAAGTTCAGCTACAAGGAGCTGAGCGCGGCCACCAGAGGATTCCACACGAGCAGGGTC
GTCGGCAAGGGCGCGTTCGGGACTGTGTACAAGGCCGCCATGCCGGGAGCTGCCGCCACC
ACCTACGCCGTTAAGCGGTCGACGCAGGCGCACCAGAGCCGGAGCGAGTTCGTCGCCGAG
CTCTCCGTCATCGCCTGCCTCCGGCACAAGAACCTCGTCCAGCTCGAGGGGTGGTGCGAC
GAGAAGGGCGAGCTGCTGCTGGTGTACGAGTACATGCCCAACGGCAGCCTGGACAAGGCC
CTCTACGGCGAGCCCTGCACGCTGTCGTGGCCGCAGAGATACACGGTGGCCGCCGGCATC
GCGTCCGTGCTGTCGTACCTCCACCAGGAGTGCGAGCAGCGCGTCATCCACCGGGACATC
AAGACCAGCAACATCCTGCTGGACGGCAACCTGAGCCCGCGCCTGGGCGACTTCGGTCTC
GCCAGGCTCATGGACCACAACAAGAGCCCCGTGTCCACGCTCACCGCGGGGACCATGGGC
TACCTCGCGCCGGAGTACCTTCAGTCCGGCAAGGCCACCGAGCAGACCGACGTGTTCAGC
TACGGCGTCGTGCTCCTCGAGGTGTGCTGCGGGAGGCGGCCCATCGACAAGGACGAAGGC
GGGGGCAAGAACGTGAACCTGGTGGACTGGGTGTGGCGCCTCCACGGCGAGGACCGTCTC
ATCGAGGCCGCGGACGCACGGCTGGCCGGCGAGTTCGACAAGGCCGAGATGCTGCGGCTG
CTGCTCGTGGGGCTGAGCTGCGCCAATCCCAACTGTGAGGAGCGCCCCGCCATGCGGCGG
GTGGTGCAGATCCTGAACCGTGAGGCGGAGCCAGCGCCCGTGCCGCGCAAGAAACCACTG
CTGGTGTTCAGCTCCAGCGCGTCCATGAAGCTGCAGGAGATCGCCTTCTCCTGCGGCGAT
GACGTCCGAGGCGGCTACTCTGCTGCCAAGCCTACATCCCCAAAGTCTGAGGGAGCCGAC
ATTGAACGCTGA

Peptide Sequence

PEP ID

EER88253
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:13561901:13564731:1 gene:SORBI_3010G119300 transcript:EER88253 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAALLRLLPFLLLALTAPPATAAAAVLTPAAAKNVTLDSATLSFADLTLLGDSFLRNGS
VGLTRETGVPSSSAGTVLCTQPVAFRGPGATASNATAVASFAARFSFVIANPNPGAAGGD
GIAFFISPGPATLGATGGYLGLFNSSDYAVAKNGSASAAIVAVEFDTMANPEFADPSDNH
VGLDLGSPLSVATVDLAASGVDLKSGNLTTAWIDYRSGDRRLEVFLSYAVATKPKRPVLS
VAVDLSPYLKEAMYVGFSASTEGSTQQHTIKEWTFQTFGFPPTANSSFESNATSNSSEPA
TVPVSNAANSHKRVGLALGILGPVALAVAFVFFAWVSIKKLIQLTSRNDAAFSPELLKGP
RKFSYKELSAATRGFHTSRVVGKGAFGTVYKAAMPGAAATTYAVKRSTQAHQSRSEFVAE
LSVIACLRHKNLVQLEGWCDEKGELLLVYEYMPNGSLDKALYGEPCTLSWPQRYTVAAGI
ASVLSYLHQECEQRVIHRDIKTSNILLDGNLSPRLGDFGLARLMDHNKSPVSTLTAGTMG
YLAPEYLQSGKATEQTDVFSYGVVLLEVCCGRRPIDKDEGGGKNVNLVDWVWRLHGEDRL
IEAADARLAGEFDKAEMLRLLLVGLSCANPNCEERPAMRRVVQILNREAEPAPVPRKKPL
LVFSSSASMKLQEIAFSCGDDVRGGYSAAKPTSPKSEGADIER

Transcript Sequence

Transcript ID

EER88253
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:13561901:13564731:1 gene:SORBI_3010G119300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCCACCCACCATGCTCTGTTCCACCTCTGCTCCTCGAGTTCACAAACCCTGCTCGCATT
AAACCACAAGCGAGCCCCACAGCTTCTCTCATGACCCCGATCCCCTTTTCTGCCCACCAC
CACCACCGATGGCCGCCGCGCTCCTCCGTTTATTGCCGTTCTTGCTGCTAGCACTGACGG
CGCCACCCGCTACCGCCGCTGCAGCTGTTTTAACACCGGCGGCGGCCAAGAACGTCACGC
TCGACTCTGCCACACTGTCCTTCGCGGACCTCACGCTGCTGGGTGACTCCTTCCTCCGCA
ACGGCTCCGTCGGGCTCACGCGGGAGACCGGCGTGCCTTCCTCCAGCGCCGGCACCGTCC
TCTGCACCCAGCCCGTCGCGTTCCGGGGCCCCGGCGCGACGGCCTCCAACGCCACCGCCG
TCGCGTCGTTCGCGGCCAGGTTCTCCTTCGTCATCGCCAACCCCAACCCCGGCGCCGCGG
GAGGCGACGGCATCGCGTTCTTCATCTCCCCCGGCCCCGCCACGCTCGGCGCCACCGGTG
GCTACCTCGGCCTCTTCAACTCCTCCGACTACGCCGTAGCCAAGAACGGGTCCGCGTCCG
CCGCCATCGTCGCCGTCGAGTTCGACACTATGGCCAACCCGGAGTTCGCCGACCCCAGCG
ACAACCACGTCGGCCTGGACCTCGGCTCGCCGCTCTCCGTGGCCACGGTCGACCTCGCCG
CGTCCGGTGTCGACCTCAAAAGCGGCAACCTCACGACGGCGTGGATCGACTACCGCAGCG
GGGACCGCCGCCTGGAGGTGTTCCTGAGCTACGCCGTGGCCACCAAGCCGAAGCGGCCGG
TCCTCTCCGTCGCCGTCGACCTCTCGCCGTACCTCAAGGAGGCCATGTACGTCGGCTTCT
CGGCGTCCACGGAGGGAAGCACCCAGCAGCACACCATCAAAGAGTGGACCTTCCAGACGT
TCGGCTTCCCGCCCACGGCCAACTCCTCCTTTGAATCCAATGCCACCAGCAACTCGTCAG
AGCCGGCCACCGTGCCAGTCTCCAACGCCGCCAACAGCCACAAGAGGGTCGGGCTCGCGC
TCGGAATCCTCGGTCCCGTCGCGCTCGCCGTCGCCTTCGTGTTCTTCGCCTGGGTCTCCA
TCAAGAAGCTCATACAACTCACCTCCCGGAACGACGCCGCTTTCTCGCCCGAGCTGCTCA
AGGGCCCGAGGAAGTTCAGCTACAAGGAGCTGAGCGCGGCCACCAGAGGATTCCACACGA
GCAGGGTCGTCGGCAAGGGCGCGTTCGGGACTGTGTACAAGGCCGCCATGCCGGGAGCTG
CCGCCACCACCTACGCCGTTAAGCGGTCGACGCAGGCGCACCAGAGCCGGAGCGAGTTCG
TCGCCGAGCTCTCCGTCATCGCCTGCCTCCGGCACAAGAACCTCGTCCAGCTCGAGGGGT
GGTGCGACGAGAAGGGCGAGCTGCTGCTGGTGTACGAGTACATGCCCAACGGCAGCCTGG
ACAAGGCCCTCTACGGCGAGCCCTGCACGCTGTCGTGGCCGCAGAGATACACGGTGGCCG
CCGGCATCGCGTCCGTGCTGTCGTACCTCCACCAGGAGTGCGAGCAGCGCGTCATCCACC
GGGACATCAAGACCAGCAACATCCTGCTGGACGGCAACCTGAGCCCGCGCCTGGGCGACT
TCGGTCTCGCCAGGCTCATGGACCACAACAAGAGCCCCGTGTCCACGCTCACCGCGGGGA
CCATGGGCTACCTCGCGCCGGAGTACCTTCAGTCCGGCAAGGCCACCGAGCAGACCGACG
TGTTCAGCTACGGCGTCGTGCTCCTCGAGGTGTGCTGCGGGAGGCGGCCCATCGACAAGG
ACGAAGGCGGGGGCAAGAACGTGAACCTGGTGGACTGGGTGTGGCGCCTCCACGGCGAGG
ACCGTCTCATCGAGGCCGCGGACGCACGGCTGGCCGGCGAGTTCGACAAGGCCGAGATGC
TGCGGCTGCTGCTCGTGGGGCTGAGCTGCGCCAATCCCAACTGTGAGGAGCGCCCCGCCA
TGCGGCGGGTGGTGCAGATCCTGAACCGTGAGGCGGAGCCAGCGCCCGTGCCGCGCAAGA
AACCACTGCTGGTGTTCAGCTCCAGCGCGTCCATGAAGCTGCAGGAGATCGCCTTCTCCT
GCGGCGATGACGTCCGAGGCGGCTACTCTGCTGCCAAGCCTACATCCCCAAAGTCTGAGG
GAGCCGACATTGAACGCTGATGCGAAGCAGTCGATACCAATTATACTACTACAGATTTGT
TGGTTTGGTCTGTGTGTTCATAAGGGGAATATAGGTAATAATCCCCATAATATAGTTGCT
TCAGTCTAGAAAGTGCTGATGAATGCAATTGCATGAGTCATCTACGGTCTAGCGGAGCTG
GCATTGACAGTTGATATCAAGCGATCAATGCACTGATAGTGAATTACTACTTGTGTGATT
CCTATATGTATTTGTCATGTGATTATTAGGGGAATATAGGTAATAATCCCCGCTATTGTA
CGAATGTTAAATACTGAATTATCCAGTCATTTACCCCAAGTGTGTTTCTGCAGATTTCAG
AGTTCAGACATCTTTGCTAAAGTTGTCAGGGTATCTCCTGTAAGGAAGCGTCAAAATTGA
CTCTGAATTTGCACGATCCATGTTCGGATTCAGAGATCAATCACACTGGCAAAGTGCAAT
TCTGCCACGGTTAGAACATTTCGTTACGAACTTCGGATCCACAACGTCAGACACTCCCTG
CGTCCAGGATCGGTTGTTCTTTGTCAGACCTGAGATGCTGGCTTGATAAAAGGGACGATC
CAAGAAGAGGA