Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88200
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:11387440:11392229:1 gene:SORBI_3010G111900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGCGAAGAAGAAACGCGTAGCGATCGTCGGAGCAGGGCCGAGCGGCCTGGCGGCA
TGCAAGCACGCGCTGGCCAAGGGCTTCCGCCCCGTGGTCTTCGAGTCCGGCACCGCCGTG
GGCGGCGTGTGGAACCGGACGCTGGCCTCCACGAGGCTGCAGACGCCGGCGTCCGCGTAC
CGGTTCTCCGACTTCCCGTGGCCGCCGACGACGGACGCGGCCGAGCCCGACGACGAGGGG
CGGCGCTTCCCGCGCCACGACCAGGTGGCGGAGTACATGGCCGCGTACGCGCGGCGCTTC
GGCGTCCTGGAGCGCGTCCGGTTCGGCTGCAGGGTGCTCGGCGCCAGCTACGTCGGGGCG
ACGGAGCAGGAGGTGGCGGCGTGGGAACGCTGGTCCGGGAATGGCCAGGCGTTCGGCGAC
GGCACGGGCGAGTGGCACCTCACCGTGCGGGTGCGGCACCGCGACGGCGACGGCGACGGC
GAGTCGGAGGGCGGCACTACTCAGACGTACAGGTTCGATTTCCTAATCCTCTGTGTCGGG
AGGTATGGCGTCGCGAAGCTCCCGACGTTTCCTGACGGGAGAGGCCCCGAGGTGTTCCGC
GGGCGAGTGCTCCATTCCATGGAGTACTCAGCCATGGCGCACGCGGACGCCGCCGAGCTG
GTCAGGGGCAAGCGCGTCGCCGTGGTTGGCGCCGGCAAGTCGGCCATGGACATCGCCGCG
CAGTGCGCCGAGGCAAACGGTATCAGGTACCCGTGCACAATGGTCTACAGAAGCGCCCAT
TGGATGCTGGATCCTAAACTTGCTATCACCACCTCGGCTCGATGGACCGAGCTGATGGTT
CACAAGCCCGGAGAGGGGTTCGCGCTCAGCCTTCTAGCCACGGCACTCACTCCACTGCGA
TGGCTTATCTCGAAGATGGCCGAAGTCCACTACAAGAGGAGCATCCCGATGCAGGAGCAC
GGGATGGTCCCGGACGGCAGCTTCTTGCAGGGGAGCCTTGGCTGGCGGATAGGCACACTG
CCGGAGGGGTTCTACGACAAGGTGGACGACGGCAGCGTGGAGCTCAGGAGGTGCCGCGAC
TCCGTCGGCTTCTGCCCAGACGGCCTCGTCGTGGACGACGACGGCGGCGGTGTGGTGGGC
GCCGACGTGGTCATCCTCTCCACGGGCTTCGACATCGACCGGCCGCTGCGGGACATGTTC
GCCTCCCCCTGGTTCGGCGAGATGGTCGCGCCGCCGGACGACGGCGCGGTGCTCCCGCTC
TACAGGCAGTGCGTGCACCCGCGGGTCCCGCAGATGGCCGTGGTCGGGTACGTGGAGAGC
GGGTCCAGCATCTACCCGTACGAGATGATGGCCAAGTGGGTGGCGCACCTGCTGGGCGGC
GCCGTCCGGCTGCCGGCCGTCGGCGACATGGAGCGCGACGTGGCGGAGTGGGCGCGGTGG
GGCCGGTGGGCGAGGCGCGCGTGCGGCGGGTTCTTCCTCAAGTCGTGCATCGCCTCCGTC
ACGACGTGGTACCACGACCAGCTCTGCCGCGACATGGGCCACCGGCCCAGGAGGAAGGCC
GGCCTCCTCGCGGAGTGGCTGCAGCCGTACGGCCCAGCGGACTACGCCGGCATCCAGTGA

Peptide Sequence

PEP ID

EER88200
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:11387440:11392229:1 gene:SORBI_3010G111900 transcript:EER88200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDAKKKRVAIVGAGPSGLAACKHALAKGFRPVVFESGTAVGGVWNRTLASTRLQTPASAY
RFSDFPWPPTTDAAEPDDEGRRFPRHDQVAEYMAAYARRFGVLERVRFGCRVLGASYVGA
TEQEVAAWERWSGNGQAFGDGTGEWHLTVRVRHRDGDGDGESEGGTTQTYRFDFLILCVG
RYGVAKLPTFPDGRGPEVFRGRVLHSMEYSAMAHADAAELVRGKRVAVVGAGKSAMDIAA
QCAEANGIRYPCTMVYRSAHWMLDPKLAITTSARWTELMVHKPGEGFALSLLATALTPLR
WLISKMAEVHYKRSIPMQEHGMVPDGSFLQGSLGWRIGTLPEGFYDKVDDGSVELRRCRD
SVGFCPDGLVVDDDGGGVVGADVVILSTGFDIDRPLRDMFASPWFGEMVAPPDDGAVLPL
YRQCVHPRVPQMAVVGYVESGSSIYPYEMMAKWVAHLLGGAVRLPAVGDMERDVAEWARW
GRWARRACGGFFLKSCIASVTTWYHDQLCRDMGHRPRRKAGLLAEWLQPYGPADYAGIQ

Transcript Sequence

Transcript ID

EER88200
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:11387440:11392229:1 gene:SORBI_3010G111900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGTTTTGTCAACTGCATATCTAAAATTGTCATAGCCACCTCTATATACAAAAAAAATCAG
TTTATGTGATGTGTTTCTCGCTCTTACCCACAATTTAATACGTACTATTTACGGGATCAG
AGGAAAATGTAGGGAAAGTTGCTCAGACGTTGTGCTAACTCATCATATAGCTACACATGA
CGGCCGGGGCTTCCGAATTGTGAAAGCCAAGAAGAGAAGAGAACACTCTGCCTATTCTGC
TAAGCTGTAAACACAAGAAGCAAATAAATGGACGCGAAGAAGAAACGCGTAGCGATCGTC
GGAGCAGGGCCGAGCGGCCTGGCGGCATGCAAGCACGCGCTGGCCAAGGGCTTCCGCCCC
GTGGTCTTCGAGTCCGGCACCGCCGTGGGCGGCGTGTGGAACCGGACGCTGGCCTCCACG
AGGCTGCAGACGCCGGCGTCCGCGTACCGGTTCTCCGACTTCCCGTGGCCGCCGACGACG
GACGCGGCCGAGCCCGACGACGAGGGGCGGCGCTTCCCGCGCCACGACCAGGTGGCGGAG
TACATGGCCGCGTACGCGCGGCGCTTCGGCGTCCTGGAGCGCGTCCGGTTCGGCTGCAGG
GTGCTCGGCGCCAGCTACGTCGGGGCGACGGAGCAGGAGGTGGCGGCGTGGGAACGCTGG
TCCGGGAATGGCCAGGCGTTCGGCGACGGCACGGGCGAGTGGCACCTCACCGTGCGGGTG
CGGCACCGCGACGGCGACGGCGACGGCGAGTCGGAGGGCGGCACTACTCAGACGTACAGG
TTCGATTTCCTAATCCTCTGTGTCGGGAGGTATGGCGTCGCGAAGCTCCCGACGTTTCCT
GACGGGAGAGGCCCCGAGGTGTTCCGCGGGCGAGTGCTCCATTCCATGGAGTACTCAGCC
ATGGCGCACGCGGACGCCGCCGAGCTGGTCAGGGGCAAGCGCGTCGCCGTGGTTGGCGCC
GGCAAGTCGGCCATGGACATCGCCGCGCAGTGCGCCGAGGCAAACGGTATCAGGTACCCG
TGCACAATGGTCTACAGAAGCGCCCATTGGATGCTGGATCCTAAACTTGCTATCACCACC
TCGGCTCGATGGACCGAGCTGATGGTTCACAAGCCCGGAGAGGGGTTCGCGCTCAGCCTT
CTAGCCACGGCACTCACTCCACTGCGATGGCTTATCTCGAAGATGGCCGAAGTCCACTAC
AAGAGGAGCATCCCGATGCAGGAGCACGGGATGGTCCCGGACGGCAGCTTCTTGCAGGGG
AGCCTTGGCTGGCGGATAGGCACACTGCCGGAGGGGTTCTACGACAAGGTGGACGACGGC
AGCGTGGAGCTCAGGAGGTGCCGCGACTCCGTCGGCTTCTGCCCAGACGGCCTCGTCGTG
GACGACGACGGCGGCGGTGTGGTGGGCGCCGACGTGGTCATCCTCTCCACGGGCTTCGAC
ATCGACCGGCCGCTGCGGGACATGTTCGCCTCCCCCTGGTTCGGCGAGATGGTCGCGCCG
CCGGACGACGGCGCGGTGCTCCCGCTCTACAGGCAGTGCGTGCACCCGCGGGTCCCGCAG
ATGGCCGTGGTCGGGTACGTGGAGAGCGGGTCCAGCATCTACCCGTACGAGATGATGGCC
AAGTGGGTGGCGCACCTGCTGGGCGGCGCCGTCCGGCTGCCGGCCGTCGGCGACATGGAG
CGCGACGTGGCGGAGTGGGCGCGGTGGGGCCGGTGGGCGAGGCGCGCGTGCGGCGGGTTC
TTCCTCAAGTCGTGCATCGCCTCCGTCACGACGTGGTACCACGACCAGCTCTGCCGCGAC
ATGGGCCACCGGCCCAGGAGGAAGGCCGGCCTCCTCGCGGAGTGGCTGCAGCCGTACGGC
CCAGCGGACTACGCCGGCATCCAGTGAAAGCTGTACTTGTACTGAACTGTACTGTATGGA
GTACGAAGGATAAAGGACCCCCAATCATCTTTGATCCAACTTCAAGCTGGGCTACCAAAT
TTACTCATTTGAATAGGCTAGGCCCATGTTGTTTACTCCAATTGGGCCCACTATACTGCT
AGCATAATAAAAACTTCAATCTGTACTTGTACTGTACGAACTACGGCCCAATCTTTTATA
CGACTTCAAGGCTGGGCTACCCCAAATTACTCATTTGAATAGGGTAGGCCCAGGGTCGCC
CGCCATTGTTGGCCGAAACACGAGCCGGACCTTGGATTTGGAAAAAGCCCACGCGTTTCC
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