Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88089
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:7456034:7458702:1 gene:SORBI_3010G086900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGACCATCTTATGCGCAGAACGAAAAGACTGAAGCGTTGCCATGAGAAGCCTGTC
TGCAGACAGAGGGGTGCACCAATCCAGTTTTCGGACCTTCCTGTGGATGTGCTAGGCACG
ATTCTGTCAAAATTGCCACCAAAGGAAATGGTAAGAACTAGTGTTTTATCAAATGAGTGG
AAACATATCTGGACAGTTTGCCCCAAACTCAGATTTGATGGTGCCGCAATGTGCGGCCAA
GATGTGGCTGGAACACAACACTATACTCGGAAGTTTATTGACAATGTCAATGGAGTCTTG
AAACAATATCATGGCAAGGTGGTTGAAGAGTTTGGGGTCAAGTTTGAATTTGACGCCATG
CTAGCTGAACATCTCGACTGTTGGGTTAATTTTGCCTTATCGTCACGAGCAAAGAATCTA
GCTCTTGACTTGCTCCCGGCCAGGTGGGGGCTCCGTCCTGATAGGTACAGATTTCCCATT
GAACTGTTTGATGGCGGAAGGATATCCCGTCTACAACACCTACAGCTTAGCTGTGTGTCT
TTTGATGAACCATCTTCCCAATTGTGCGGTTTCCCCAACCTGAAGAAGCTTGATCTAGAT
GTGGTCAACATCACCCGTAAAGGTCTTGAAGATATGTTGTCAAATTGCTCTAATCTTGAA
TGGTTGAGTATAGGGAGATGCCATCTGGATAATGATGAATTGAGAGTGCATCGTCCGCTG
CCTCGCTTGCTATACTTGAACGTTGCATACTGTGCGATAAGCAAGATAGAATTCATAGCC
ATGAATCTGCAGACTTTTGTATTCCAGGGGAGCTGGATTAATTTTTACCTCGGGACTGCT
TTGGCACTGAAAGATGTGAAGCTCTATCTTATTGGCAAGATAACTCTTAACCTCGCTATG
ACCGTGCTTCCCTTCTTGTTTCCAAGGGCACAGAATATGATTCTGCATTGTTCCTTGCCA
CTTAAGATGCCATGGCCACAAGGAAACGGTTCTAAGTTTTCACTTTTAAAGTATCTACAA
CTCAAGTTTTTGGTGTTACCGGAAGATCTCCTTAACCTTCTATCATTGGCCTCTTTCCTG
AGTGCTGCTCCTTTCATTGAAAAATTAGAGATACATTTTGCTATTCGTACCCTCCCACAA
GGCTCAGAGCTTATCAGGAGGCTTCCAGGTTCTACATATCGCTATCTGAAGAACCTTAGT
ATCACTGGATTTGCAGGGTGCACCGGTCAAGTTGAATTGTTGTTACACATTGTAGAAAAT
GCCCCTAACCTTGAGGCTTTGACTATTGACCGAGCTAATCACTATGGTAGTATTGAAGAG
CATGTATGGCAATCAAGATCCAAGGCACTAGACATTGCTAGGAGACATCTGGATGGGAGG
TTATCAGAAAATACAAAGGTTTCTATAATGTAG

Peptide Sequence

PEP ID

EER88089
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:7456034:7458702:1 gene:SORBI_3010G086900 transcript:EER88089 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEDHLMRRTKRLKRCHEKPVCRQRGAPIQFSDLPVDVLGTILSKLPPKEMVRTSVLSNEW
KHIWTVCPKLRFDGAAMCGQDVAGTQHYTRKFIDNVNGVLKQYHGKVVEEFGVKFEFDAM
LAEHLDCWVNFALSSRAKNLALDLLPARWGLRPDRYRFPIELFDGGRISRLQHLQLSCVS
FDEPSSQLCGFPNLKKLDLDVVNITRKGLEDMLSNCSNLEWLSIGRCHLDNDELRVHRPL
PRLLYLNVAYCAISKIEFIAMNLQTFVFQGSWINFYLGTALALKDVKLYLIGKITLNLAM
TVLPFLFPRAQNMILHCSLPLKMPWPQGNGSKFSLLKYLQLKFLVLPEDLLNLLSLASFL
SAAPFIEKLEIHFAIRTLPQGSELIRRLPGSTYRYLKNLSITGFAGCTGQVELLLHIVEN
APNLEALTIDRANHYGSIEEHVWQSRSKALDIARRHLDGRLSENTKVSIM

Transcript Sequence

Transcript ID

EER88089
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:7456034:7458702:1 gene:SORBI_3010G086900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCCCTTCATCCTCTCCTTCTCCAACCTCGTTGTATCTTCTGCGTGCCGAATGCCTCCACC
TCGTGCTCCCAAGCTACCGGCGGCAGTGGTGCTGGTGCAGCATCCAGGGGCAGGGAAAGC
ATAGGGTTCAATCGGAGTATCGGGCGCGACCCTGCCCGCCGCTGCCTCCTCCCACCACCG
TCCGCCCCACGCTCCCCGACGAGTCCGAGTCCGAGTCCGCGGCCTTCTCTTATGAATCGG
AGTCCCAGGGTCCTACTCCAGATTACCTCGCTATATATTTTGCGAGCCGGGGCTTCATCG
ATTCATCTTATTTTGTGCACATCGCGTCTCCGGAGGAATCTGTAGCGCCGCCTCTTGTAG
TCCTAGCGCAGCGGCTGTAGCGCCTCTTGCAGCGGAAGGTCAGCTAAACTCTCTTTCTCC
TTATTTCTGTATCCCCCACCAGCGAGCTGCTTTGGGTTTAGCCCTTCATCTATCTATATA
TGTGTGTTTATATGCGATCTGTCAAAAAGGGTTTTTTTAATGGTTTTATTATGCTAGGAT
TTCAGCAATATGTTTACGGTTCACATGGCACTGTTTCTTGCAGAATCAAAATGGAGGACC
ATCTTATGCGCAGAACGAAAAGACTGAAGCGTTGCCATGAGAAGCCTGTCTGCAGACAGA
GGGGTGCACCAATCCAGTTTTCGGACCTTCCTGTGGATGTGCTAGGCACGATTCTGTCAA
AATTGCCACCAAAGGAAATGGTAAGAACTAGTGTTTTATCAAATGAGTGGAAACATATCT
GGACAGTTTGCCCCAAACTCAGATTTGATGGTGCCGCAATGTGCGGCCAAGATGTGGCTG
GAACACAACACTATACTCGGAAGTTTATTGACAATGTCAATGGAGTCTTGAAACAATATC
ATGGCAAGGTGGTTGAAGAGTTTGGGGTCAAGTTTGAATTTGACGCCATGCTAGCTGAAC
ATCTCGACTGTTGGGTTAATTTTGCCTTATCGTCACGAGCAAAGAATCTAGCTCTTGACT
TGCTCCCGGCCAGGTGGGGGCTCCGTCCTGATAGGTACAGATTTCCCATTGAACTGTTTG
ATGGCGGAAGGATATCCCGTCTACAACACCTACAGCTTAGCTGTGTGTCTTTTGATGAAC
CATCTTCCCAATTGTGCGGTTTCCCCAACCTGAAGAAGCTTGATCTAGATGTGGTCAACA
TCACCCGTAAAGGTCTTGAAGATATGTTGTCAAATTGCTCTAATCTTGAATGGTTGAGTA
TAGGGAGATGCCATCTGGATAATGATGAATTGAGAGTGCATCGTCCGCTGCCTCGCTTGC
TATACTTGAACGTTGCATACTGTGCGATAAGCAAGATAGAATTCATAGCCATGAATCTGC
AGACTTTTGTATTCCAGGGGAGCTGGATTAATTTTTACCTCGGGACTGCTTTGGCACTGA
AAGATGTGAAGCTCTATCTTATTGGCAAGATAACTCTTAACCTCGCTATGACCGTGCTTC
CCTTCTTGTTTCCAAGGGCACAGAATATGATTCTGCATTGTTCCTTGCCACTTAAGATGC
CATGGCCACAAGGAAACGGTTCTAAGTTTTCACTTTTAAAGTATCTACAACTCAAGTTTT
TGGTGTTACCGGAAGATCTCCTTAACCTTCTATCATTGGCCTCTTTCCTGAGTGCTGCTC
CTTTCATTGAAAAATTAGAGATACATTTTGCTATTCGTACCCTCCCACAAGGCTCAGAGC
TTATCAGGAGGCTTCCAGGTTCTACATATCGCTATCTGAAGAACCTTAGTATCACTGGAT
TTGCAGGGTGCACCGGTCAAGTTGAATTGTTGTTACACATTGTAGAAAATGCCCCTAACC
TTGAGGCTTTGACTATTGACCGAGCTAATCACTATGGTAGTATTGAAGAGCATGTATGGC
AATCAAGATCCAAGGCACTAGACATTGCTAGGAGACATCTGGATGGGAGGTTATCAGAAA
ATACAAAGGTTTCTATAATGTAGGACGATGTGACTGAAAAGGAAGCCTGCTAATGTTGTG
GATGGCCCCTCAGTTATTGTCCCCTCATCGTTCTTCTTGTTCTTGCATCGTTCGTCTTGT
TCCTCTTCTCTGAGTTGTTAATGAACTCTTCGTGTTCTTACCGGAGTCTGTAAGCAATGC
GCTTATAACGTGTTGAATGTAATGAAAACAAGAACAAAGAATAGAAATAATGTACTGTGT
TCCGTTGATTGATCTTGTTT