Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88051
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:6906580:6911544:1 gene:SORBI_3010G080900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTCTCTGACCGCTCCCGCGAGTCACTCCTACCGAGCTTCCTCTACTCCCCGGCG
GCGACGAGGTCCTTCGCAGGCGCCTCCCGCTTTCCCGCCTCGCCCGCCGCGGCGGCGGCC
TCGGCCCCGAGCGTAGCGGGAGGTGGCGCCCTGCCGTTCACGATCCAGGCACCCAATGAG
AAGATCGAGATGTACTCGCCAGCGTTCTACGCCGCCTGCACGGCCGGAGGCATCGCCAGC
TGCGGGCTCACTCACATGGCCGTCACGCCGCTCGACCTCGTCAAGTGCAACATGCAGATT
GATCCGGCAAAATACAAGAGCATCTCATCTGGTTTTGGAATACTGGCCAAGGAGCAAGGA
GTGAGGGGCTTCTTCAGGGGGTGGGTGCCAACCCTGCTTGGCTACAGTGCCCAGGGAGCT
TGCAAGTTTGGATTCTATGAATTCTTTAAGAAATACTACTCAGATATTGCTGGGCCTGAG
TATGCTCAGAAATACAAGACCCTAATATACCTGGCTGGGTCGGCTTCTGCTGAGGTGATT
GCTGATGTGGCTCTCTGCCCCTTTGAAGCCGTGAAGGTCCGTGTGCAGACACAACCTGGA
TTTGCTCGTGGTCTCAGTGATGGGCTCCCCAAGTTCATCAAATCTGAGGGTGCCTTGGGG
CTTTACAAGGGAATTGTCCCTCTCTGGGGTCGTCAGATTCCTTATACAATGATGAAGTTT
GCTTCATTTGAGACCATTGTTGAACTTATCTACAAGCATGCTGTTCCTGTTCCAAAGTCA
GAGTGTAGCAAACCTTTCCAATTGGGTATCAGCTTTGCCGGTGGCTACATCGCTGGTGTT
TTCTGTGCCATTGTTTCTCACCCTGCTGATAACTTGGTCTCTTTCCTGAACAATGCCAAG
GGTGCTACGGTCGGTGATGCTGTTAAGAAGCTTGGCCTCTGGGGCCTCTTCACTCGTGGT
CTTCCTCTTCGTATTGTGATGATTGGTACTCTTACTGGAGCCCAGTGGGGTATTTATGAT
GCATTCAAAGTCATGGTTGGACTGCCGACAACTGGAGGTGTCACGCCAGCACCAGCTCCT
GCTACTGAGGAGGCTGCATTGAAGGCCAGTGCATGA

Peptide Sequence

PEP ID

EER88051
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:6906580:6911544:1 gene:SORBI_3010G080900 transcript:EER88051 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALSDRSRESLLPSFLYSPAATRSFAGASRFPASPAAAAASAPSVAGGGALPFTIQAPNE
KIEMYSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGILAKEQG
VRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAQKYKTLIYLAGSASAEVI
ADVALCPFEAVKVRVQTQPGFARGLSDGLPKFIKSEGALGLYKGIVPLWGRQIPYTMMKF
ASFETIVELIYKHAVPVPKSECSKPFQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAK
GATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGVTPAPAP
ATEEAALKASA

Transcript Sequence

Transcript ID

EER88051
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:6906580:6911544:1 gene:SORBI_3010G080900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAGTTCTCGGCCAGACACGGGAGGCAGCGGCGAGGAGGCCGCGGCGTGGCGCCGTGCTCC
GTGCGCACCGCGGGTTTCAACACCATTGGCACGCCCCCGACTCCGCCCCTTCGCTGCTGC
TGCCGAGCCTCCATGTGGAGGCGCCGGCGCCCGGGGGCGACGCGCTCGCCGTGCCGTTCG
AGCAGAGGGTGCAGGAGGTCGTGCTCAAGCAGGCGGCGCTCGCGGCCGCGGCGCCGAGGA
CGGCGCGGATCGAGCCCGTGCCCATGGACGGCGGGCTCAAGGCTGCGGGGAGGTCTGCCA
GGAGTACGCTTGGAAACACCCCCGCTCCACAGCACAGGATCTCGTTTACCGCTGCGGGGA
GGTCTACCAGGAGTACGCCAAGACATTCTACTTGGGTAAACGAGATCGAAATTCCCGCTG
TGCTCTTCTTGTTCATCTGAATACAGTCTAGTTTAATGACTAAAGCATCGGCATTAGCCA
CAAAGGTTTTGCCGTGATCGAGGCACATGGATGTGTCACAAGTACTAGTGTGTTTTTTCT
TGCAAGTTGTTTAAACAAAGTAAAAAAACAAACCTTTTGTCCTAAAAGTACAATAGGCAT
AGGATGAAAAATATCCTTGGTAGGAGCCTGAAATGACTGTCCAAGTACAAAGGTTTTGCT
TACTGAATCGGCTAGTACACTTAATTTGATTAACTATGACAATGATTGTAAAAAAAAGAC
AGCATGCTCAGTAGTTGTAGTTGTGGCCACCACATGCACATACCGAATAACGACCAGTCA
GCTTCGACAATCAGTGCGTACATACATGTGCCTGATCACTGATCTGATGAGATGCCGCTG
TTCTTCTGTTGCAGCGACGCAGCTGATGACACCGGAGAGGAGGAGGGCAAGCCCCATTCT
TTGGCGTCAAAATTGGTAGTGAGTGGCACTGGGGAGAGGAAGATTTTATTGTCCACCAAT
TAGCCTAGAGGTATTTAAGTCAAATGTCAGACCACTTAACTGTTATTAGATTTTAAAATA
GACGGAATGACATACAGGTATAGTCGAAGTCGAAGATGAAGTTGGCCACAACGGTTCAGT
GGCAGGTGGTTTGTTCAATCTTTCTCCGAAATAGATCGGGGACCAGCTGGACTCCGCCGC
CTCCCCCCTCCCATTCCCCCAGCGCCAAATCCACGTGAAGGCGAGAGCGCAGAGAGCACC
ACCACCGCCGAGAGGATTGGTCCAGAGGAGCAAACCCTCCAAAGTTCGGCGGCAATGGCG
CTCTCTGACCGCTCCCGCGAGTCACTCCTACCGAGCTTCCTCTACTCCCCGGCGGCGACG
AGGTCCTTCGCAGGCGCCTCCCGCTTTCCCGCCTCGCCCGCCGCGGCGGCGGCCTCGGCC
CCGAGCGTAGCGGGAGGTGGCGCCCTGCCGTTCACGATCCAGGCACCCAATGAGAAGATC
GAGATGTACTCGCCAGCGTTCTACGCCGCCTGCACGGCCGGAGGCATCGCCAGCTGCGGG
CTCACTCACATGGCCGTCACGCCGCTCGACCTCGTCAAGTGCAACATGCAGATTGATCCG
GCAAAATACAAGAGCATCTCATCTGGTTTTGGAATACTGGCCAAGGAGCAAGGAGTGAGG
GGCTTCTTCAGGGGGTGGGTGCCAACCCTGCTTGGCTACAGTGCCCAGGGAGCTTGCAAG
TTTGGATTCTATGAATTCTTTAAGAAATACTACTCAGATATTGCTGGGCCTGAGTATGCT
CAGAAATACAAGACCCTAATATACCTGGCTGGGTCGGCTTCTGCTGAGGTGATTGCTGAT
GTGGCTCTCTGCCCCTTTGAAGCCGTGAAGGTCCGTGTGCAGACACAACCTGGATTTGCT
CGTGGTCTCAGTGATGGGCTCCCCAAGTTCATCAAATCTGAGGGTGCCTTGGGGCTTTAC
AAGGGAATTGTCCCTCTCTGGGGTCGTCAGATTCCTTATACAATGATGAAGTTTGCTTCA
TTTGAGACCATTGTTGAACTTATCTACAAGCATGCTGTTCCTGTTCCAAAGTCAGAGTGT
AGCAAACCTTTCCAATTGGGTATCAGCTTTGCCGGTGGCTACATCGCTGGTGTTTTCTGT
GCCATTGTTTCTCACCCTGCTGATAACTTGGTCTCTTTCCTGAACAATGCCAAGGGTGCT
ACGGTCGGTGATGCTGTTAAGAAGCTTGGCCTCTGGGGCCTCTTCACTCGTGGTCTTCCT
CTTCGTATTGTGATGATTGGTACTCTTACTGGAGCCCAGTGGGGTATTTATGATGCATTC
AAAGTCATGGTTGGACTGCCGACAACTGGAGGTGTCACGCCAGCACCAGCTCCTGCTACT
GAGGAGGCTGCATTGAAGGCCAGTGCATGATCTCGATATTAAGATATAACTAAACAATCA
TTCTTCACCGAGACAACTGTATGCATTCATTACATGAGTTCAACCCTACTTATACGTTGA
ATGTTTTAGAGGATGGTTATCTTCTGAACGAGAGCAACTTTCTAAGCCGGGAATCATAGC
GTTCTGCTCAAGTGTACTGTTAGTGCTTGTAATAAGTTTTAGGTGGGTAAATTACTGTTA
GGAGCCCAGGTTTTCCACCTGAGGCAAGGTTTATTCATGGTACACTGCCTGAATGCCATT
CTGCCATTCATGTTCCCGAAGGAGTTATTCTGTCAATTTTGATATACAGTCATGCAAGTG
ATGGGAAGATTCAAGCAGTCTGTTTCAGTAAGATGCTTTTGTTTTTCCTCAATCAAGAGT
TGCTTGTGCATTCTCATTAAATCAGCATTCTGTTGTGCTAGCTACTTGTGGCAAGCATGC
TCTAGTTCATATCTTCGATAAATTCTCTGTACACTTATTGAAGCTAAAGATCCCTTGTGT
T