Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER88001
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:5823618:5827925:1 gene:SORBI_3010G072000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGCTGAATCAGAGCACGGCAACTGCAATGCTTGGGCAGCGAGAGATCCTTCTGGA
GTTCTCTCACCATACAGCTTTAACCGCAGACCAGTGCAAAGCAGCGATGTTGCGTTGAAG
ATCTTATACTGTGGAGTCTGTTATGCTGACGTTGTCTGGACACGGAATATGCACCATGAT
TCAAAATATCCTGTGGTTCCTGGGCATGAGATAGCTGGAGTCGTAACTCAGGTTGGTGCA
GATGTCAAAGGCTTTAAAGTGGGTGACCATGTAGGTGTTGGAACTTATGTGAACTCATGC
CGAGATTGTGAGAACTGCAATAGCTCTCTAGAGAACCACTGTCCAAAAGGAGTTTATACT
TTCAATGGCATTGATACAGATGGAACTGTCACAAAGGGGGGTTACTCCACTCACATTGTA
GTCCATGAAAGGTATTGCTTCCAAATACCTGATGGCTATCCTTTGGCGAAGGCAGCACCT
CTTCTGTGTGCTGGAATAACTGTGTATACTCCAATGATGCGACACAACATGAACCAACCT
GGAAAGTCACTTGGGGTCATTGGACTCGGTGGTCTAGGTCACATGGCAGTGAAATTTGGT
AAAGCATTTGGTCTGAAGGTCACAGTTTTGAGTACAAGTGAATCAAAGAGACATGAAGCC
ATCAGCCTCCTTGGAGCGGATAATTTTGTTATATCATCAGATACACAGCAGATGGAGTCC
CTGAGAAACTCCCTGCACTTCATAGTTGACACCGCTTCTGGCGACCATCCATTTGATCCA
TATCTCTCTCTCCTTATGGTTGGTGGTGTGATGGCAATTGTGGGCTTTCCAAGTGAGATC
AAAATGCATCCTGCAAGCCTTAATCTTGGTGCACGGACCTTGTCTGGTAGTGTTACTGGA
GGTACAAAAGACATCCAAGAAATGGTTAACTTCTGTGCGGCGAACAAAATCTCTCCAGAG
ATTGAGATCATTAAGATAGATTATATCAATGAGGCTCTCACGAGGCTTGTTAACCGAGAT
GTGAAATACCGCTTTGTTATCGACATCGAGAACTCTTTCAAGTAA

Peptide Sequence

PEP ID

EER88001
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:5823618:5827925:1 gene:SORBI_3010G072000 transcript:EER88001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAESEHGNCNAWAARDPSGVLSPYSFNRRPVQSSDVALKILYCGVCYADVVWTRNMHHD
SKYPVVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNSSLENHCPKGVYT
FNGIDTDGTVTKGGYSTHIVVHERYCFQIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQP
GKSLGVIGLGGLGHMAVKFGKAFGLKVTVLSTSESKRHEAISLLGADNFVISSDTQQMES
LRNSLHFIVDTASGDHPFDPYLSLLMVGGVMAIVGFPSEIKMHPASLNLGARTLSGSVTG
GTKDIQEMVNFCAANKISPEIEIIKIDYINEALTRLVNRDVKYRFVIDIENSFK

Transcript Sequence

Transcript ID

EER88001
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:5823618:5827925:1 gene:SORBI_3010G072000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTCCCATAAATAATTGCATTTCTTTAACTTCTATAGTTTATGTTTGACCGTTCGTCTTAT
TAAAAAATTTTTAATAAATATTATTTATTTTTTCATGACTTATTTTATTGTTAGATATAT
TTTTTATGATAATTTATTTATTTTATTATTTGTACAAAAATTTAAATAAAATAAATGGTC
AAACATTACTATTAGCAGTCGAAGAAATGCATTTATTTATGGGACGAAGAGAGTAAACAA
GGCCTGAAGCTGAAGCCTGAAGGAAGAAAGGGAAAGGGGATTGACGCATGCACTGATGGT
TCGGCCAGGCACAATCAGCGATGAACTCATGGCTGACGAGAAGCCCCGTAACTCCGGAAG
CCAGGTCCGCGACGTCACTGCTGTCGGCACCCTCTCCAATCCAATCCATCCACCCGTCAA
CGGAGCATGATCCGGTCTGCGCCCTTCCAACTTCTTCCCCATTATAATTTGCTCACTCGC
CGGCGGCCGCTACCTGCTGCAACCCGGCGACACCCGACCGACAGCCTGCTTGCCACGCTT
GCATCGAGGAGAGTTCGGGGACCGCCCGGTGCAGAAGGAATCGACGCAGGGGTGAGTCTT
TTCCCCTCCCCTCCCATGTACTTCCCGCCTCGATTCGACTCCAAGGGTCAGCGATTTCAC
TGCGCTTTTCCTTAGCATAGGCTATCTGAAATTTCCTTCTGTTAGAGCCGAGTCTTTCGA
TCTGCTGACTTGTCACGAATTCATTCTGCAGTTCAGTTCGAATGGCTGCTGAATCAGAGC
ACGGCAACTGCAATGCTTGGGCAGCGAGAGATCCTTCTGGAGTTCTCTCACCATACAGCT
TTAACCGCAGACCAGTGCAAAGCAGCGATGTTGCGTTGAAGATCTTATACTGTGGAGTCT
GTTATGCTGACGTTGTCTGGACACGGAATATGCACCATGATTCAAAATATCCTGTGGTTC
CTGGGCATGAGATAGCTGGAGTCGTAACTCAGGTTGGTGCAGATGTCAAAGGCTTTAAAG
TGGGTGACCATGTAGGTGTTGGAACTTATGTGAACTCATGCCGAGATTGTGAGAACTGCA
ATAGCTCTCTAGAGAACCACTGTCCAAAAGGAGTTTATACTTTCAATGGCATTGATACAG
ATGGAACTGTCACAAAGGGGGGTTACTCCACTCACATTGTAGTCCATGAAAGGTATTGCT
TCCAAATACCTGATGGCTATCCTTTGGCGAAGGCAGCACCTCTTCTGTGTGCTGGAATAA
CTGTGTATACTCCAATGATGCGACACAACATGAACCAACCTGGAAAGTCACTTGGGGTCA
TTGGACTCGGTGGTCTAGGTCACATGGCAGTGAAATTTGGTAAAGCATTTGGTCTGAAGG
TCACAGTTTTGAGTACAAGTGAATCAAAGAGACATGAAGCCATCAGCCTCCTTGGAGCGG
ATAATTTTGTTATATCATCAGATACACAGCAGATGGAGTCCCTGAGAAACTCCCTGCACT
TCATAGTTGACACCGCTTCTGGCGACCATCCATTTGATCCATATCTCTCTCTCCTTATGG
TTGGTGGTGTGATGGCAATTGTGGGCTTTCCAAGTGAGATCAAAATGCATCCTGCAAGCC
TTAATCTTGGTGCACGGACCTTGTCTGGTAGTGTTACTGGAGGTACAAAAGACATCCAAG
AAATGGTTAACTTCTGTGCGGCGAACAAAATCTCTCCAGAGATTGAGATCATTAAGATAG
ATTATATCAATGAGGCTCTCACGAGGCTTGTTAACCGAGATGTGAAATACCGCTTTGTTA
TCGACATCGAGAACTCTTTCAAGTAACATGCTGGTCTACATGCTCTCAGTCTTTCTATTA
ATATACTAGAGCAAACACAAATGTGAAAGTCATGTCAAATAAACTTGATGTAATGCTGCA
GCGGTTTTACGATGCTAGTTAATTAAAACCCTGTGGCATGGGCGTCAAATAGCAAATGTA
AACATCCATAGTTGGACAGCAAGGGGAGATAAGTATATTGTGACGATAAAGTCGCTCTAT
GAATAAGGCATCATGTCGATGTGTTCCACAATATTTCCTAGTGCATGTATGGCGGTGGTC
AGTACCATCACTTTCACATCCGGTTGAATACATGCCAATTGGAGAAAAAAAATTGGATGG
ATACTATCTCCACCGTACTCCATTGCATACCACCCTCGATCTGCTGCCAATCTCATGGAT
CCAGTAACACTCATCAGCCTGCTTTTCGTGGGCGTACATGGGCCAGGTCAATCATGGATC
AGTACAGGTGGACGAAGAAAAATCAAGAGCGTTTGATTATTTAGACAGGACACGTGGTGG
TAGATCAAGGGCAATATGCACTGAAACACGGTGGATACAATATCCATCCATTTTTTTTTC
CATCAATCGACGTTTCTGGTTAACCAGTTCACTGTTAGAAACCTGTATCATGGTTGGGCT
ACTTAGTTGGCAAGTGGCTTGCTAAACCTGT