Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER87977
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:5243103:5246843:1 gene:SORBI_3010G065900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGCTGTTCCGGCGGCTCTTCTACCGGCGGCCGCCCGATGGGCTCGTCGAGATCTCC
GGCAACATCCTCGTATTTGACCACTGTTACTCCATGGATTTGCTGGAAGAAGACGAGCTA
ATGCCATACATTGGAGGAATCTTAAAACAGCTATTTGGCCGATACTCCATCGACTCATTC
ATGGTATTCAACTTTGAGGGAAGCAAGAAGGACAATCAAATTGCCAGCATTTTCTCATAT
TATGACATGTGTGTGATGGGTTACCCACGTAACTATGAAGGATGCCCCTTGCTCACCATG
GAGATGATTCACCATTTCTTGAGATCTAGTGAAAGCTGGCTCTCATTAAGCCAGGACAAC
TTTCTGTTAATACATGCAGAACATGGTGGATGGCCAGTTCTTGCATTTGCATTGGCAGCC
CTATTGGTCTACCTCAAAAGGTATACTGATGAGAGGAAAGCTTTGGAGGCAGTCTGCAAA
CAGGCACCTGATGGGTTAGCTGAGCTATTCTCACCACTGGACCCAGTGCCTTCTCAACTA
AGATATTTGAAGTATGTGTCGAAACGGCACAAATCACCAGAATCATGGCCTCCTGTTGAC
AAAATGCTGAATTTGAACTGTATAATAATCAGGAAGGTACCAAACTTTGATGGGCGAGGG
GGATGTAGACCAATATTCCACATTTATGGCCTAGATCCCCTTGCGCCTAATGACAGGGCT
ACTAAACTTCTCTTTTCGACACCAAAGACAAGTGATTTCGTCCAGCTCTATACACAGGAA
GAGTGTGAGATAATCAAGGTTAATGTCCATTGTGCTGTTCAAGGAGACATTGTAATTGAG
TGTGTCAGCCTGGATGAGGACTTCGAACATGAAGTTATGGTGTTCAGAGCCATGTTTAGC
ACAGCTTTTATTGAAGACAATTTGTTGGTACTTGATAGGAACCAGATTGACATTCTGTGG
GACACAAAACACCGGTTTCCTGTAGACTTCAGAGTTGAGGCTATATTTTCTGATATGGGA
ATGGGCACAACCACTCACAAATCAGAGTTATCTAGTGAGGAGAAAGAAAGCCTTTCCAAG
GTTGATGATGCCTTCAGCCATCTGGATTGGTCAAGCAAAACTGATCACATCACAAATGAA
GAATCAAAACAGAAGGGATTACACGGAGAACATGACGGCTTTGACACAATACCTATAGAG
GAAACAGAAATCAGCAGCGCATCAGCTGAAAACAGCAGCAGATCTGTCCAGATTCATCAC
ATAGAACCTGCTGAAAACCATTCTTCTCTTGCCAATGTGCATTCTTCGCCAGAACCTGAG
CCTTCTGGACCGAACTTTCAAGGAGGTCAACCCTTCAATGATACATCTGCACAGGAGGAA
CCTGAAGTGGATGACTCCAAAATCAAACCCAATTCAGAAACTTCCCGAGATGCAGAAACT
GGCGGTGCTGCCGCTGCCACCGCCGAATGGTCTGACAACAACTCGGATGTGTTTCTGTCA
GACACACACACCCCCTCGAGCAGCACGCCGTCTAGTCCGCCAAAGTTCGACGAAGATATC
CTGGAGGCTGGTATGGTTGAAACTCGATCACAACTGACTGAACTGAAGATATAA

Peptide Sequence

PEP ID

EER87977
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:5243103:5246843:1 gene:SORBI_3010G065900 transcript:EER87977 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLFRRLFYRRPPDGLVEISGNILVFDHCYSMDLLEEDELMPYIGGILKQLFGRYSIDSF
MVFNFEGSKKDNQIASIFSYYDMCVMGYPRNYEGCPLLTMEMIHHFLRSSESWLSLSQDN
FLLIHAEHGGWPVLAFALAALLVYLKRYTDERKALEAVCKQAPDGLAELFSPLDPVPSQL
RYLKYVSKRHKSPESWPPVDKMLNLNCIIIRKVPNFDGRGGCRPIFHIYGLDPLAPNDRA
TKLLFSTPKTSDFVQLYTQEECEIIKVNVHCAVQGDIVIECVSLDEDFEHEVMVFRAMFS
TAFIEDNLLVLDRNQIDILWDTKHRFPVDFRVEAIFSDMGMGTTTHKSELSSEEKESLSK
VDDAFSHLDWSSKTDHITNEESKQKGLHGEHDGFDTIPIEETEISSASAENSSRSVQIHH
IEPAENHSSLANVHSSPEPEPSGPNFQGGQPFNDTSAQEEPEVDDSKIKPNSETSRDAET
GGAAAATAEWSDNNSDVFLSDTHTPSSSTPSSPPKFDEDILEAGMVETRSQLTELKI

Transcript Sequence

Transcript ID

EER87977
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:5243103:5246843:1 gene:SORBI_3010G065900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGTTCGCCTCCGCCTGGTGCTACAGCGGTCGCACGCACGCGCCCACGACGACCCGTTAA
ACAAACCAAAAAACGTCCAAACCACCAAAAACCTCCGAGAAAACAAATCCACCCCGGCGC
GGAGCTGCCCTCCTCGCTGCCACCTCCTTCCCTTCCCTTCCCTTCCCTCCCTCCCTCCCC
GAGCCCCCCGTTATATCGCCACCACCGGCTCCGCTACTGCTCGTCACGTCTTCTCCCTGC
CCGCCCCCCATCCCCCTCCGGCTACCCGGCGGGCGCGGCGCGGCGCGTTCTCTGGCCGGC
CGGTTCCTGCGTCGGTCGGCGGGCGGGCGGATGTCGCTGTTCCGGCGGCTCTTCTACCGG
CGGCCGCCCGATGGGCTCGTCGAGATCTCCGGCAACATCCTCGTATTTGACCACTGTTAC
TCCATGGATTTGCTGGAAGAAGACGAGCTAATGCCATACATTGGAGGAATCTTAAAACAG
CTATTTGGCCGATACTCCATCGACTCATTCATGGTATTCAACTTTGAGGGAAGCAAGAAG
GACAATCAAATTGCCAGCATTTTCTCATATTATGACATGTGTGTGATGGGTTACCCACGT
AACTATGAAGGATGCCCCTTGCTCACCATGGAGATGATTCACCATTTCTTGAGATCTAGT
GAAAGCTGGCTCTCATTAAGCCAGGACAACTTTCTGTTAATACATGCAGAACATGGTGGA
TGGCCAGTTCTTGCATTTGCATTGGCAGCCCTATTGGTCTACCTCAAAAGGTATACTGAT
GAGAGGAAAGCTTTGGAGGCAGTCTGCAAACAGGCACCTGATGGGTTAGCTGAGCTATTC
TCACCACTGGACCCAGTGCCTTCTCAACTAAGATATTTGAAGTATGTGTCGAAACGGCAC
AAATCACCAGAATCATGGCCTCCTGTTGACAAAATGCTGAATTTGAACTGTATAATAATC
AGGAAGGTACCAAACTTTGATGGGCGAGGGGGATGTAGACCAATATTCCACATTTATGGC
CTAGATCCCCTTGCGCCTAATGACAGGGCTACTAAACTTCTCTTTTCGACACCAAAGACA
AGTGATTTCGTCCAGCTCTATACACAGGAAGAGTGTGAGATAATCAAGGTTAATGTCCAT
TGTGCTGTTCAAGGAGACATTGTAATTGAGTGTGTCAGCCTGGATGAGGACTTCGAACAT
GAAGTTATGGTGTTCAGAGCCATGTTTAGCACAGCTTTTATTGAAGACAATTTGTTGGTA
CTTGATAGGAACCAGATTGACATTCTGTGGGACACAAAACACCGGTTTCCTGTAGACTTC
AGAGTTGAGGCTATATTTTCTGATATGGGAATGGGCACAACCACTCACAAATCAGAGTTA
TCTAGTGAGGAGAAAGAAAGCCTTTCCAAGGTTGATGATGCCTTCAGCCATCTGGATTGG
TCAAGCAAAACTGATCACATCACAAATGAAGAATCAAAACAGAAGGGATTACACGGAGAA
CATGACGGCTTTGACACAATACCTATAGAGGAAACAGAAATCAGCAGCGCATCAGCTGAA
AACAGCAGCAGATCTGTCCAGATTCATCACATAGAACCTGCTGAAAACCATTCTTCTCTT
GCCAATGTGCATTCTTCGCCAGAACCTGAGCCTTCTGGACCGAACTTTCAAGGAGGTCAA
CCCTTCAATGATACATCTGCACAGGAGGAACCTGAAGTGGATGACTCCAAAATCAAACCC
AATTCAGAAACTTCCCGAGATGCAGAAACTGGCGGTGCTGCCGCTGCCACCGCCGAATGG
TCTGACAACAACTCGGATGTGTTTCTGTCAGACACACACACCCCCTCGAGCAGCACGCCG
TCTAGTCCGCCAAAGTTCGACGAAGATATCCTGGAGGCTGGTATGGTTGAAACTCGATCA
CAACTGACTGAACTGAAGATATAACGAGTTTCCTTTCTTGGATTGTAAACTGGGGCTCAC
CTGATCCATGGATGATGGAGCTGTCCAAACCCCAAAATATGTACTTCAACAGATACGTTT
ACGCAACATGGGAAAATGATGGTAGTTCAGGCCATATTCTCAAGCATGTACAGTTGATGT
TCTCAAACATGTATAAAAGATTGATCCAGATTTTGTTG