Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER87863
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:3252759:3255918:-1 gene:SORBI_3010G042300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGGAGCACCACCGTCTTCCCGGCTACGACGTCGTCGTCGGGCGAGGAGGGGTCGTCG
CCGCTGGTGGCACCGGCGATGGAGGAGATCACCGAGGAGGGCAGGACGCCAGGCAAGGAT
GGCGCCGCCCTGATGGTGGCGCGGACAGAGAGGTGGCTGTCTTCGTCGCCGGGGACGACG
GTGCTGCGGACGAGCGGCGTGCGATCGGTCATGGTCGGCTTCGTCCTTCTTGCCTTGCTG
CTTGGCGCGCGTAGATGGACCGGCCTCGACGCTCCGTCTCTGATAGGGAACACGGTCAGC
ATCGGCGCCAGGCAACGGCGTCGCCACCACATCGACTCTACGTCGCCGCTCCTACAGATA
CCATTCACCTGCGGCAACGAGACGTCCCCGCACCCGCATCCACCGAAATGCCCTGGGACA
CCAGCACTGCCGCCACCGTCGACGCCGCCGCCACTGCCCGGCGACGACCCGGCACCGTCG
TGCCCGGACTACTTCCGGTACATCCACGACGACCTCCGGCCGTGGCGCGGCGCCGGGATC
ACGCGGGAGGCGGTGGAGCGCGCGCGGCCGCACGCCTACTTCCGGCTGGTGGTCGTGGGC
GGGCGCGCGTACGTGGAGACGTACCGGCGCGCGTACCAGACCCGGGACGTGTTCACGCAG
TGGGGCGTCCTGCAGCTGCTGCGCCGCTACCCGGGCCGCGTCCCGGACCTGGACATCATG
TTCGCCTGCGACGACCCGGGCCAGGTGCGCGCCGCCGACTTCCCGACGACGCCGTCCGAC
GCGCCGCCCGTGTTCCGGTACTGCAAGGACGCCCTGACGCTCGACATCGTGTTCCCGGAC
TGGTCCTTCTGGGGCTGGCCGGAGGTCGGCATCCGGCCGTGGCCGCAGCTGCTGGAGGAG
GTCAGGCAGGAGAACGAGCGCGTGCGGTGGCCGGTGAGGCAGCCCTACGCGTTCTGGAAG
GGCAACCCCGAGGGCTACCGCATACGCCACGAGCTCATGAGATGCAACGCCTCCAACGGC
CAAGAATGGAATGCCCGCCTCTTCACCCAGAACTGGCATTATGCAATTCAAAACGGGTTC
AAAGATTCGAGAATACCTAAGCAATGCATTTACAGGTACAAAGTTTACGTGGAGGGGAAT
GCGTGGTCGGTGAGCGAGAAGTACATCCTGGCGTGCGACTCGCCGGTGCTGTTCGTCAAC
ACGCCCTTCCAGGACATCCTGTCCAGGGGGCTCGTCGCCGGCAAGCACTACTGGCCCATT
AATCGGGAGCACATCTGCAAATCCATCAAGTTTGCCGTGGACTGGGGCAACGAACACCCA
GCGCAGGCGCAGCTCATCGGCGAGCAGGGCAGCCAGTTTGTGAGGGAGGAGATGAGCATG
GACTACATCTATGACTACATGCTGCACCTGCTCACCGAGTACGCCAAGCTGCTCAGGTAC
AAGCCCACTGTGCCGGAGAAGGCCGTGGAGATCTGCACAGAATCTATGGCCTGCCCTGCC
CAGGGCATGCACCGAGACTGCATGATGGACTCCATGGAGAGGCAAGTCGCAAGCTTCAAC
CCATGCACACTGCCACCACCATTCACCCCTGAGGAGGCCAAGGAAATAGCCGACAGGGAG
GCGGAGGTGCTCAGGAAGGTAGAGAAGATGGAGGGCTAG

Peptide Sequence

PEP ID

EER87863
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:3252759:3255918:-1 gene:SORBI_3010G042300 transcript:EER87863 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRSTTVFPATTSSSGEEGSSPLVAPAMEEITEEGRTPGKDGAALMVARTERWLSSSPGTT
VLRTSGVRSVMVGFVLLALLLGARRWTGLDAPSLIGNTVSIGARQRRRHHIDSTSPLLQI
PFTCGNETSPHPHPPKCPGTPALPPPSTPPPLPGDDPAPSCPDYFRYIHDDLRPWRGAGI
TREAVERARPHAYFRLVVVGGRAYVETYRRAYQTRDVFTQWGVLQLLRRYPGRVPDLDIM
FACDDPGQVRAADFPTTPSDAPPVFRYCKDALTLDIVFPDWSFWGWPEVGIRPWPQLLEE
VRQENERVRWPVRQPYAFWKGNPEGYRIRHELMRCNASNGQEWNARLFTQNWHYAIQNGF
KDSRIPKQCIYRYKVYVEGNAWSVSEKYILACDSPVLFVNTPFQDILSRGLVAGKHYWPI
NREHICKSIKFAVDWGNEHPAQAQLIGEQGSQFVREEMSMDYIYDYMLHLLTEYAKLLRY
KPTVPEKAVEICTESMACPAQGMHRDCMMDSMERQVASFNPCTLPPPFTPEEAKEIADRE
AEVLRKVEKMEG

Transcript Sequence

Transcript ID

EER87863
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:3252759:3255918:-1 gene:SORBI_3010G042300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACATCGAATCTTTAGACGTATGCATGGAGTATTAAATATAAACAAAATTTAAAACTAATT
ACACAGTTTGGTCAAAATTTACGAAACGAATCTTTTGAGCCTAGTTAGTCTATAATTGGA
CAATAATTACCACAAACAAACGAAAGTGGTACAGGGTTCCGAAAAAATTTCAGGCAAGGA
ACTAAACAAGGCCTGAACACAAGAGAAGGGGAAGCGAAGCAACCCGGCCAAACTTATGAA
CAGAAGTCCACGTTTCGCTGAAAATCTGACGTGTGATACCAAATGCATTCGTTGTTTCGT
ACTTCGCATCTGCACATGCCATTCTGCTACTTTCATGCCAAAGACGTATATAGTTGTGCT
TGTGCAGTACGATCATTGTTCATTCATCCTTCTGGGTATCAAAATTCAAGCATGGGCGTG
TATTGGTACTGAGAGTTTTCCTCCACGCGTTTGACTTGGCTTGGCGACCTACATATAAGA
TCCACCCGTCCGTGTGGCCGTGTAGCTCGCTGACTAGCGCAGCAGCAGAGTTTCGCTCCT
CATTCTCCTACCTGCTTCTGTTCACGTTCGTACCGTGCACCTTGTGGTTGGCCATGAGGA
GCACCACCGTCTTCCCGGCTACGACGTCGTCGTCGGGCGAGGAGGGGTCGTCGCCGCTGG
TGGCACCGGCGATGGAGGAGATCACCGAGGAGGGCAGGACGCCAGGCAAGGATGGCGCCG
CCCTGATGGTGGCGCGGACAGAGAGGTGGCTGTCTTCGTCGCCGGGGACGACGGTGCTGC
GGACGAGCGGCGTGCGATCGGTCATGGTCGGCTTCGTCCTTCTTGCCTTGCTGCTTGGCG
CGCGTAGATGGACCGGCCTCGACGCTCCGTCTCTGATAGGGAACACGGTCAGCATCGGCG
CCAGGCAACGGCGTCGCCACCACATCGACTCTACGTCGCCGCTCCTACAGATACCATTCA
CCTGCGGCAACGAGACGTCCCCGCACCCGCATCCACCGAAATGCCCTGGGACACCAGCAC
TGCCGCCACCGTCGACGCCGCCGCCACTGCCCGGCGACGACCCGGCACCGTCGTGCCCGG
ACTACTTCCGGTACATCCACGACGACCTCCGGCCGTGGCGCGGCGCCGGGATCACGCGGG
AGGCGGTGGAGCGCGCGCGGCCGCACGCCTACTTCCGGCTGGTGGTCGTGGGCGGGCGCG
CGTACGTGGAGACGTACCGGCGCGCGTACCAGACCCGGGACGTGTTCACGCAGTGGGGCG
TCCTGCAGCTGCTGCGCCGCTACCCGGGCCGCGTCCCGGACCTGGACATCATGTTCGCCT
GCGACGACCCGGGCCAGGTGCGCGCCGCCGACTTCCCGACGACGCCGTCCGACGCGCCGC
CCGTGTTCCGGTACTGCAAGGACGCCCTGACGCTCGACATCGTGTTCCCGGACTGGTCCT
TCTGGGGCTGGCCGGAGGTCGGCATCCGGCCGTGGCCGCAGCTGCTGGAGGAGGTCAGGC
AGGAGAACGAGCGCGTGCGGTGGCCGGTGAGGCAGCCCTACGCGTTCTGGAAGGGCAACC
CCGAGGGCTACCGCATACGCCACGAGCTCATGAGATGCAACGCCTCCAACGGCCAAGAAT
GGAATGCCCGCCTCTTCACCCAGAACTGGCATTATGCAATTCAAAACGGGTTCAAAGATT
CGAGAATACCTAAGCAATGCATTTACAGGTACAAAGTTTACGTGGAGGGGAATGCGTGGT
CGGTGAGCGAGAAGTACATCCTGGCGTGCGACTCGCCGGTGCTGTTCGTCAACACGCCCT
TCCAGGACATCCTGTCCAGGGGGCTCGTCGCCGGCAAGCACTACTGGCCCATTAATCGGG
AGCACATCTGCAAATCCATCAAGTTTGCCGTGGACTGGGGCAACGAACACCCAGCGCAGG
CGCAGCTCATCGGCGAGCAGGGCAGCCAGTTTGTGAGGGAGGAGATGAGCATGGACTACA
TCTATGACTACATGCTGCACCTGCTCACCGAGTACGCCAAGCTGCTCAGGTACAAGCCCA
CTGTGCCGGAGAAGGCCGTGGAGATCTGCACAGAATCTATGGCCTGCCCTGCCCAGGGCA
TGCACCGAGACTGCATGATGGACTCCATGGAGAGGCAAGTCGCAAGCTTCAACCCATGCA
CACTGCCACCACCATTCACCCCTGAGGAGGCCAAGGAAATAGCCGACAGGGAGGCGGAGG
TGCTCAGGAAGGTAGAGAAGATGGAGGGCTAGGCGGCTAGCTAGCTGAAATCTGACACCA
TAGAATTTGATGCAAAAATGAGAAACATGAGAAGAGTTTAGGAGCCAAAGGCTTCTGGTT
TCTGAATTCTGAATATATGTAAGAAAAGAGCTAATGCACAAGTACTTAATTTGCTACAGG
TACACAGAAGAAAATAGTTGATGTTAAGTGGAAACTTGAAAGCATTGCGAAATAAGTTAC
TCATCGCTAGTGACTTAGATATTTGTACCTGTAAGTGCAAACCACCTGTATACATCCATT
GT