Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EER87789
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:1892802:1897161:1 gene:SORBI_3010G023400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCATCTGGGCGTGCTCCTCGTCTTGGCTGCACTCACCGCGTCGCCGCTCGCTGCG
GCGTGGCGCCCGTGGCCGCCGCGCGCCAACGGGACGACGGCGGGGCTGGGCGCTTCAAAG
AAGTTCGAGGGCTCGTCGGAGTTCGTGAAGCTAGAGTACCACATGGGTCCCGTCCTGGCG
TCCGCCATCACGGTGCACCCGATCTGGTATGGCGCCTGGCCCGCCGCGCAGAAGCGCACG
ATCCGCGCGTTCCTCCGCTCCCTCGCGCCACCGCCCGACTCGTCGGCCCGCATCCCTCCT
CCGTCGGTCTCCGCCTGGTGGCGCACGGTGCGGCTCTACACGGACCAGACCTCCGCCAAC
GTGTCGGCGGCCGTGACCCTGGGCGCGGAGAAGTGCGACGCGCGCATGTCCCGCGGCGCG
CGTCTCTCCCGGATGGACATCCAGTCCGTGGTCCGCGACGCGGTCACGGCGCGCACCCGC
CCGCTCCCCGTCGACTCCAGCGGCGGCGTGTACCTGGTGCTCACCTCCCCGGACGTCTCC
GTGGAGGACTTCTGCGGGCAGGTGTGCGGCTTCCACTACTTCACGTTTCCGTCGGTGGTC
GGCTACACGCTGCCCTACGCGTGGGTCGGGAACTCGGCGCGGCGGTGCCCCGAGGTGTGC
GCGTACCCGTTCGCGATCCCGTCGTATGTCCCCGGGCGGAAGGCGGAGGCGCCGCCGAAC
GGGGACGTCGGCGTGGACGGGATGGTCAGCGTCATCGCGCACGAGCTGGCCGAGCTCGCG
TCCAACCCGCTCGCCAACGCGTGGTACGCTGGGAGTGACCCCTCGTTCCCGACCGAGATC
GCTGACCTCTGCGAGGGGATCTACGGCACCGGCGGCGGTGGCGCGTACACCGGGCAGCTC
CTCACGGATGCGCGCTCCGGCGCGGCGTATAACGTTAATGGCGTCGGTGGCCGGAGGTTC
CTCGTGCAGTGGGTTTGGAACCCCGTGCTCAGCTACTGCTCCGGCCCCAACGCGCTCGAC
CAGTAG

Peptide Sequence

PEP ID

EER87789
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:1892802:1897161:1 gene:SORBI_3010G023400 transcript:EER87789 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQHLGVLLVLAALTASPLAAAWRPWPPRANGTTAGLGASKKFEGSSEFVKLEYHMGPVLA
SAITVHPIWYGAWPAAQKRTIRAFLRSLAPPPDSSARIPPPSVSAWWRTVRLYTDQTSAN
VSAAVTLGAEKCDARMSRGARLSRMDIQSVVRDAVTARTRPLPVDSSGGVYLVLTSPDVS
VEDFCGQVCGFHYFTFPSVVGYTLPYAWVGNSARRCPEVCAYPFAIPSYVPGRKAEAPPN
GDVGVDGMVSVIAHELAELASNPLANAWYAGSDPSFPTEIADLCEGIYGTGGGGAYTGQL
LTDARSGAAYNVNGVGGRRFLVQWVWNPVLSYCSGPNALDQ

Transcript Sequence

Transcript ID

EER87789
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:1892802:1897161:1 gene:SORBI_3010G023400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTCCCTCTCCCTGGCCCTGCTGCCTGCTTCCTCTCCACTCCACAGTCTCGCACTCTGTC
GCTCAGCTCCGTTCCCCTCCATTTCCCTTCTTCTCCCTATAAAGCTCCGTCCCCAGCCAA
GAAGGCAGCCTTAAACCTCCACTACCCCCATCCCCAAGCGCCTCGCCGCAATGCAGCATC
TGGGCGTGCTCCTCGTCTTGGCTGCACTCACCGCGTCGCCGCTCGCTGCGGCGTGGCGCC
CGTGGCCGCCGCGCGCCAACGGGACGACGGCGGGGCTGGGCGCTTCAAAGAAGTTCGAGG
GCTCGTCGGAGTTCGTGAAGCTAGAGTACCACATGGGTCCCGTCCTGGCGTCCGCCATCA
CGGTGCACCCGATCTGGTATGGCGCCTGGCCCGCCGCGCAGAAGCGCACGATCCGCGCGT
TCCTCCGCTCCCTCGCGCCACCGCCCGACTCGTCGGCCCGCATCCCTCCTCCGTCGGTCT
CCGCCTGGTGGCGCACGGTGCGGCTCTACACGGACCAGACCTCCGCCAACGTGTCGGCGG
CCGTGACCCTGGGCGCGGAGAAGTGCGACGCGCGCATGTCCCGCGGCGCGCGTCTCTCCC
GGATGGACATCCAGTCCGTGGTCCGCGACGCGGTCACGGCGCGCACCCGCCCGCTCCCCG
TCGACTCCAGCGGCGGCGTGTACCTGGTGCTCACCTCCCCGGACGTCTCCGTGGAGGACT
TCTGCGGGCAGGTGTGCGGCTTCCACTACTTCACGTTTCCGTCGGTGGTCGGCTACACGC
TGCCCTACGCGTGGGTCGGGAACTCGGCGCGGCGGTGCCCCGAGGTGTGCGCGTACCCGT
TCGCGATCCCGTCGTATGTCCCCGGGCGGAAGGCGGAGGCGCCGCCGAACGGGGACGTCG
GCGTGGACGGGATGGTCAGCGTCATCGCGCACGAGCTGGCCGAGCTCGCGTCCAACCCGC
TCGCCAACGCGTGGTACGCTGGGAGTGACCCCTCGTTCCCGACCGAGATCGCTGACCTCT
GCGAGGGGATCTACGGCACCGGCGGCGGTGGCGCGTACACCGGGCAGCTCCTCACGGATG
CGCGCTCCGGCGCGGCGTATAACGTTAATGGCGTCGGTGGCCGGAGGTTCCTCGTGCAGT
GGGTTTGGAACCCCGTGCTCAGCTACTGCTCCGGCCCCAACGCGCTCGACCAGTAGCAGA
TTCGACTAGCTGTTCTTGCTGCTGTTCCGGTTTCATTTCATCTGCTTGAAATGAAATGGA
ATTTTGCCATCCGTTGTCATTGTGCAAAGGATGATGATTCTGCTCTGCCTCTAGTGCATT
GGATTTCCTTGCTCTGGAAATCCATGGGATGTTTCTGTATAGAGTTGTTATTATTAATGG
CACGTTTGATGGGGGGAGAAAGAAGGTGGTGGTGATGACTGATGAGCAGGAGGAGGATGG
CAATGGCATGTCTTATGAGGTGAATTTTGGAACTTTTTATTATTAATAGTAAGATTTACC
TGTTTACCATCTGACCGTGGTTCGTTTGAATTTGAAATTGAGATTTTTTCTGTAGCCTGT
AGGACGGGGGTAAAACTGTCAGGGTTACTTGGCTTTAAGGGGAGAAGGCTATTGTAGCTA
CTGCCTTGGCTTTTACTAGTGCAGTACAGTCGCAGCATGATGGCTTTTGTACAGAGTGGT
TGGCTTTGCTGTTTGCTCCATGCTCTCTCAAATGATGGTACTAACAACAGCATTGCAGGA
CGGTGCAAGCAATGCTCCACAGTACACACTCACTCTACCGCACAGCAAAAAAGACAAGGC
TGTGCTGTGAGCCTGTGACTGTGAGCTACTACCCCTTGTACTAATCTCTGACACGTAGTG
GTAGGCTGATAGCCGCTAATCACGGAATCAGTTTACTTGTGCAGTGCGATGCAATGCCAT
GCAATGCAACAGCAGTAGAGTATAGGGGTTACTGATGATTCAGGGATCGGAGGGCAGCAC
AATGCAACGATTCTCTGGGGGGGGGGGGGTGGGTTTGTTGGGTAGTGACTGCACTAGTAG
TAGTAGGCTTTCACTTTCAGTTAGAGCCTCCTTCTCCCCCACCCGGCCACCCCATGCCAG
TGCGTGTCTTGTGTGGGCACTGGGCGGGGCACGGCACGGGCACGCATTATTGACTGTTGT
TATTGGCCTCCGACCGAAACAGCACTATTGTGCGCTGCTCTGGGCTCTGGCGTTCTCGCC
TCCAACCAGCAGATCCATTCGTCGTAGATGGCCGCCCGTGCCTGCCCGCCCGCCCGTGTC
GCTCGGCGTCTTCTTGGACGGATGTTCTGCTCGGACTGTTCGTCCCTCCCTGTTCTATAG
TCCGTTGTAGTATCTCTCATCGTCAGGCGCCCGTACATTCAACGTTACAGTAATGCAGGC
AGTAATGATGTGTTTCACGGGACTCCTCGAAAGCCCTGATTGTTTCCAAAACCCTTGTTT
GTACAAGTACTGCACTACTGGCAGTATTATTAAACCTTAAGGGCTTGTTTATCACCCAAA
AACTAAAAACTTTTCAAGATTTATCGAATCTTGCGGCATATGCATGGAGGATTAAATATA
GATGAAAATAAAAACTAATTGCACAGTTTGTCTATAAATCGCGAGACGAATATTTTAAAT
CTAGTTACTTCATGATTGGACAATGTTTGTTAAATAAAAAACGAAAATACTATAATGTCG
AAATTCAAAAATAAAAATAAATTTGGATCTAAACGAGGCCTAAATCAAGCGAGTTTTCTT
ACGTAAAAGTGCATGCAATGCGACATCCACTGACTGCAATATTCCATCCAGCCCATGCCC
AGCCACGACGACCACGATGGAAACGGAATGGGACCCCCGGTTCGGCGTGCGTGCCTGGCG
ATGGCGACGGCGGAGGAAAGCATTCATTCTCAGCCGTCACGTCGTGCTACCGTGCCGGGA
CAGTAGTTACTAGCAGCAGTAGTGTACGCACCCCGGTAGTCCATCCTACAGGGCTACAGG
CGTGGCCTAGTAGTACGGCGGCGCTCATCAGTCATCATGGTCGCGGACAGCACTCGATGC
TTTGCCTTGTGAGTTGTGAGGCGTACCCGGCCGGCCGCGAGTCGTCATCGCCAGTCGCCT
CCTCTCCATCCAGGCGCCAGCCAGCGCCCGCCCCTGTGACCCTGAGCTGCGCAAATGTCG
GCTGCTGCAGCGCTGCCGCATCCGCATGGCATGGCGCCTCACCACTCTCTCTTCCCAGCC
AGTCGTGCAGTGCGGTGCAGCAAAACACTTTCCTCAAAAGATTCGTCTTTTTCAATTAAA
CTATGCAATTAGTTTTTATTTTCGTTTATATTTAATACTTTAAGGCCTATGGAGGCAGTG
CATTATTGCAGACTCAGCGCCTGGACGTGCTGCTGGTCCACTGCCATGCCACAGACATGG
CAATGGCAACAAGGGTCGTCATTCCATTCGGCACATAGAGCATCTGCGAAGTGCGAACGG
CATCGATCGATCGACAGACCGGTTCGAGTTCACGACCGAACAACACTAACCTTTGGAGTT
TGGAGCACTCCTCTCTCACGTCTGAACTCCATTCGCCGCTGTTCCCCCCTTTCCTCCACA
CTCTTCACTTGTCTCTCTGAACTCGGCAGCAATCATGGTCATGGAGGCTCAGTTAAGGTG
AACCAGCCACCACCACCAGTCCACCACTGAAAAAAGCGCGAAACGTTCATGGTGGGCTCT
GCCGCACGCCGCTGCAGATGATGACATGAAATGCTGCCCGTTGGTCAAGCACGACGTGTC
ATCATCTTTCTTGGCTTTTACCTTTATGCCTCTGATCCTACGGCTACCGTCTTGGGGACA
ATCTGCTCGATCTACCTCTACTCCTATTTCTGTACCTGCACGAGGAGATGGAGTTCAAGA
TAAAGTCTTTGATGGGTCTTAACACGAAAACCAGCGTGTTGTGTCCGCTAATTATAAGCC
AGGCAAAACGGGGAAGGTACAGACACCCTTTCCAGCTATCCATGGCCTCTGGACAACTAG
CCGCACAGCGCCTGGACTTGATTGTGTCCAAATTTCAGCATGAATTTGGGTGTACTGGGT
GCAGTGTCTTGCTTGATTAGTGATAATAACTGCAGCTACCTCTCTCTCTGTATTTCCGTT
GGTCATCTAATGGAAATGGAAATGCCCCGATTCGGAAAAAAAAAACTGCAGCTACCTGTA
TAGTACATTTTTTTTTCTAGAACACGTCTTCACATGTATTTCATTAAAAAGAAATAAAAC
ATACAAACAAACCAAGAGTTCAATCCCCTAGGTGAGCTGCCCAGGCTGCCGAGATCAACA
AACGCCCATCAGGGCCACTGCAAATTGTAGAACAAACAGG