Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400097633
CDS Infomation

pacid=37462446 polypeptide=PGSC0003DMP400069308 locus=PGSC0003DMG400047204 ID=PGSC0003DMT400097633.v4.03 annot-version=v4.03
Sequence

ATGTCGTTCGTGTTCTTGAGAAGACAACTAATTAACTTGCCTTGTATACTCAATTCCCAA
TGTAACTTAAGAATATGTTCATATTCCTCAAGACCCACAAGAGCTAGTCAAGCAAATGAT
TTGTTCGTGGAAGATAGTAAACCACGTCCTGTTGCTGCAGATTTTGGTGGTGGGGTTTTT
CATCTTTCGCCATTGTATAGGGATGAGAAATATTCGTTGAAAGATTGCAGGATTGAACTA
GTGGATAATGAGACTTGGAGTGTGTCCTCTGGCTTAGTTGAAGTGTGGAGAGGAAATACA
AATGTTGCGTCGAAGAAAAATCCTTCATTTAGTCAAGAGGACGAGATCGATGATGGGGTG
GACAATTATTATGATGAAGATCCTGATTATGACGATATTGAGGATTTGAGGATACGCGGT
AATTTGTTTTACAAGCTTGATAAAGATTCCAAGGAATATGAGGAATATAAGTTTGATTTC
CATAGAAGGAATAAGAACAAGAATAATGGAAATGACTGTCCCAAAGAGAAGGAAAAATCA
AGTAACGTTTCAGCTTCTGGGGTCGAGAAAAGCCTAAAGGGTATAGATGAGAAGAAGCAA
AGTAAGAAGGACAAACTGCTCTGTAACTCTGACTTTGCAGTGGACAGAATGATGCTAGAT
GATACGAATAGCCTTCAGGATTTTCAGCTAAAGAGGTCAAGAGTTCCAACTTTTAATCAG
CTTACTGCCCCTTATCATGAGCCGTTTTGTTTGGATATTTTTGTCTCGAAAGGTTCGGTC
AGTGCTAGCATCATCCATAGAGCTACTAGCAAGGTCGTTGCTGTGGCACATTCTATTTCC
AAGGACATGAAATTTGACTTGGGATCGACAAAGAATAGAGCTACTTGTGCTGCTGTTGGG
GAAGTTCTGGCTCAAAGAGCCTTGGCTGATGATATTCATAATGTAATTTATACGCCAAGG
ACGAGGGAGAAATTGGAGGGGAAACTTGAGATTGTTCTTCAGTCCATTATTAACAATGGC
ATCAATGTGAAGGTAAAGATTAAGCAGAGGAAAACCAAGAAACATGGCTTCCACCGCCCA
ACAGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400069308
PEP Infomation

pacid=37462446 transcript=PGSC0003DMT400097633 locus=PGSC0003DMG400047204 ID=PGSC0003DMT400097633.v4.03 annot-version=v4.03
Sequence

MSFVFLRRQLINLPCILNSQCNLRICSYSSRPTRASQANDLFVEDSKPRPVAADFGGGVF
HLSPLYRDEKYSLKDCRIELVDNETWSVSSGLVEVWRGNTNVASKKNPSFSQEDEIDDGV
DNYYDEDPDYDDIEDLRIRGNLFYKLDKDSKEYEEYKFDFHRRNKNKNNGNDCPKEKEKS
SNVSASGVEKSLKGIDEKKQSKKDKLLCNSDFAVDRMMLDDTNSLQDFQLKRSRVPTFNQ
LTAPYHEPFCLDIFVSKGSVSASIIHRATSKVVAVAHSISKDMKFDLGSTKNRATCAAVG
EVLAQRALADDIHNVIYTPRTREKLEGKLEIVLQSIINNGINVKVKIKQRKTKKHGFHRP
TA*

Transcript Sequence

Transcript ID

PGSC0003DMT400097633
Transcript Infomation

pacid=37462446 locus=PGSC0003DMG400047204 ID=PGSC0003DMT400097633.v4.03 annot-version=v4.03
Sequence

ATGTCGTTCGTGTTCTTGAGAAGACAACTAATTAACTTGCCTTGTATACTCAATTCCCAA
TGTAACTTAAGAATATGTTCATATTCCTCAAGACCCACAAGAGCTAGTCAAGCAAATGAT
TTGTTCGTGGAAGATAGTAAACCACGTCCTGTTGCTGCAGATTTTGGTGGTGGGGTTTTT
CATCTTTCGCCATTGTATAGGGATGAGAAATATTCGTTGAAAGATTGCAGGATTGAACTA
GTGGATAATGAGACTTGGAGTGTGTCCTCTGGCTTAGTTGAAGTGTGGAGAGGAAATACA
AATGTTGCGTCGAAGAAAAATCCTTCATTTAGTCAAGAGGACGAGATCGATGATGGGGTG
GACAATTATTATGATGAAGATCCTGATTATGACGATATTGAGGATTTGAGGATACGCGGT
AATTTGTTTTACAAGCTTGATAAAGATTCCAAGGAATATGAGGAATATAAGTTTGATTTC
CATAGAAGGAATAAGAACAAGAATAATGGAAATGACTGTCCCAAAGAGAAGGAAAAATCA
AGTAACGTTTCAGCTTCTGGGGTCGAGAAAAGCCTAAAGGGTATAGATGAGAAGAAGCAA
AGTAAGAAGGACAAACTGCTCTGTAACTCTGACTTTGCAGTGGACAGAATGATGCTAGAT
GATACGAATAGCCTTCAGGATTTTCAGCTAAAGAGGTCAAGAGTTCCAACTTTTAATCAG
CTTACTGCCCCTTATCATGAGCCGTTTTGTTTGGATATTTTTGTCTCGAAAGGTTCGGTC
AGTGCTAGCATCATCCATAGAGCTACTAGCAAGGTCGTTGCTGTGGCACATTCTATTTCC
AAGGACATGAAATTTGACTTGGGATCGACAAAGAATAGAGCTACTTGTGCTGCTGTTGGG
GAAGTTCTGGCTCAAAGAGCCTTGGCTGATGATATTCATAATGTAATTTATACGCCAAGG
ACGAGGGAGAAATTGGAGGGGAAACTTGAGATTGTTCTTCAGTCCATTATTAACAATGGC
ATCAATGTGAAGGTAAAGATTAAGCAGAGGAAAACCAAGAAACATGGCTTCCACCGCCCA
ACAGCTTAG