Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400097557
CDS Infomation

pacid=37478326 polypeptide=PGSC0003DMP400069232 locus=PGSC0003DMG400047128 ID=PGSC0003DMT400097557.v4.03 annot-version=v4.03
Sequence

ATGGACGTTCTCCGATTCACCGGAGCAACATTCACCGGCACAGCATTCACCGTTGTTCGT
TCCGACGCCATTAAACCTGGCGCAAAATTAAAAACAAAACGAACTAGGTTTATTAGTGCT
ACCATTACTAAACCAGCGGCGGTTGTTACGGCAGCGGAGCCAGTGCAAATTTCAAAGACG
GATGATACATTGATACCAGTAGTACATCCGAGTTCGTTACAATGCGAGGAAGGTTATTTG
TTACCGAATTATCCACGTGGTGAAATCGGTTACAATTACGTCAAAGAAATATTGACATCA
AAAGTGTATGAATTAGCTGAGGAGACGCCATTGCAGCGTGCACATAAGTTATCAGAGAGG
TTAGGGGTAAATGTATGGCTCAAACGCGAAGATCTTCATCCGGTCTTCTCATTCAAGGTC
AGAGGATCTTACCATATGATGGCAAAACTCTCGAAGGAGCAGTTAGAAAAGGGCGTTATA
TGCTCATCAGCGGGAAATCATGCACAAGGTGTTGCATTAGCTGCCAAGAAACTCGGCTGC
AATGCTGTGATTGTGATGCCCGTTACTACGCCAGAAATTAAATGGAAATCAGTTGAGAGA
TTGGGTGCTACTGTTGTTCGTGTGGGGGATACATATGAAGAAGCACAAGCCTATGCTGTA
GCTCAGGGCAAAGAAGAAGGACGTGCATTCGTCTCTCCCTTTGATCACCCTGATATCATA
ATAGGGCAAGGTACGGTTGGAATGGAGATCAACCGCCAATTCAAAGATAAGATACACGCG
ATATTTGTGCCTATTGGTGGAGGGGGTCTTATAGCTGGCATTGCTGCTTATATGAAAAAA
GTCTCCCCTGATACGAAGATTATTGGTGTTGAGCCAGTCGATTCCAATTCAATGGCGTTG
GCATTACACCACGGTCAAAGAGTAATGCTGGAAAAAGTTGGATCTTTTGCAGATGCAGTA
GCTATTAGAATGGTTGGTGAAGAAAGTTTCCGTCTCTGCAAGGAACTAATAGATGGGATT
GTCCTAGTTAATCATGATTCTATAAGTGCATCGATAAAGGACATGTTCGAAGAGAAAAGA
AGCATACTAGAGCCAGCAGGTGCACTTGCCCTAGCTGGAGCTGAAGCATACTGTAAGTAC
TATGGTGTAAAGGGAGAAAACGTCGTAGCAATAACTAGTGGAGCCAACATGAACTTTGAC
AGACTTAGATTGGTAACTGAACTCGCGGATGTTGGTAGACAGAGGGAAGCTGTTCTCTCT
ACTTATATGCCTGAAGAACGAGGCAGCTTCAAAAAGTTCTACGAGATGATGGGACATACT
AATATTACTGAATTGAAGTACAGATATGATTCTGAGAAAGAAAATGCTCGAGTATTTTAC
AGAGTTGGTCTTCACACGAAAGTGGAACTCGAAGAAATGGTGGACAGGATGGAATCATCA
CAACTGCATACGATTAATTATACAGATAATGAATTGGTTAAAGATCATCTAAGACATCTG
ATAGGTGGGAGATCAGATGTACACAATGAGCATCTCTGTCGATTCATTTTCCCAGACAAG
CCTGGTGTTTTGATGAAGTTTTTAGACGCTTTCAGCCCAAGTTGGAATATAAGTTTGTTA
CATTACCGTGCACAGGGAGAAACTGGCGGGAATGTGCTAATCGGACTCCAAGTTCCACAG
AACGAGGTTGATGAATTCAGGGGTCGAGCTGAGAGTCTTGGTTATGTGTATGTTGTGGAG
ACTCTCAATGAAGCTTTCCAGCAACTAATGCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400069232
PEP Infomation

pacid=37478326 transcript=PGSC0003DMT400097557 locus=PGSC0003DMG400047128 ID=PGSC0003DMT400097557.v4.03 annot-version=v4.03
Sequence

MDVLRFTGATFTGTAFTVVRSDAIKPGAKLKTKRTRFISATITKPAAVVTAAEPVQISKT
DDTLIPVVHPSSLQCEEGYLLPNYPRGEIGYNYVKEILTSKVYELAEETPLQRAHKLSER
LGVNVWLKREDLHPVFSFKVRGSYHMMAKLSKEQLEKGVICSSAGNHAQGVALAAKKLGC
NAVIVMPVTTPEIKWKSVERLGATVVRVGDTYEEAQAYAVAQGKEEGRAFVSPFDHPDII
IGQGTVGMEINRQFKDKIHAIFVPIGGGGLIAGIAAYMKKVSPDTKIIGVEPVDSNSMAL
ALHHGQRVMLEKVGSFADAVAIRMVGEESFRLCKELIDGIVLVNHDSISASIKDMFEEKR
SILEPAGALALAGAEAYCKYYGVKGENVVAITSGANMNFDRLRLVTELADVGRQREAVLS
TYMPEERGSFKKFYEMMGHTNITELKYRYDSEKENARVFYRVGLHTKVELEEMVDRMESS
QLHTINYTDNELVKDHLRHLIGGRSDVHNEHLCRFIFPDKPGVLMKFLDAFSPSWNISLL
HYRAQGETGGNVLIGLQVPQNEVDEFRGRAESLGYVYVVETLNEAFQQLMH*

Transcript Sequence

Transcript ID

PGSC0003DMT400097557
Transcript Infomation

pacid=37478326 locus=PGSC0003DMG400047128 ID=PGSC0003DMT400097557.v4.03 annot-version=v4.03
Sequence

ATGGACGTTCTCCGATTCACCGGAGCAACATTCACCGGCACAGCATTCACCGTTGTTCGT
TCCGACGCCATTAAACCTGGCGCAAAATTAAAAACAAAACGAACTAGGTTTATTAGTGCT
ACCATTACTAAACCAGCGGCGGTTGTTACGGCAGCGGAGCCAGTGCAAATTTCAAAGACG
GATGATACATTGATACCAGTAGTACATCCGAGTTCGTTACAATGCGAGGAAGGTTATTTG
TTACCGAATTATCCACGTGGTGAAATCGGTTACAATTACGTCAAAGAAATATTGACATCA
AAAGTGTATGAATTAGCTGAGGAGACGCCATTGCAGCGTGCACATAAGTTATCAGAGAGG
TTAGGGGTAAATGTATGGCTCAAACGCGAAGATCTTCATCCGGTCTTCTCATTCAAGGTC
AGAGGATCTTACCATATGATGGCAAAACTCTCGAAGGAGCAGTTAGAAAAGGGCGTTATA
TGCTCATCAGCGGGAAATCATGCACAAGGTGTTGCATTAGCTGCCAAGAAACTCGGCTGC
AATGCTGTGATTGTGATGCCCGTTACTACGCCAGAAATTAAATGGAAATCAGTTGAGAGA
TTGGGTGCTACTGTTGTTCGTGTGGGGGATACATATGAAGAAGCACAAGCCTATGCTGTA
GCTCAGGGCAAAGAAGAAGGACGTGCATTCGTCTCTCCCTTTGATCACCCTGATATCATA
ATAGGGCAAGGTACGGTTGGAATGGAGATCAACCGCCAATTCAAAGATAAGATACACGCG
ATATTTGTGCCTATTGGTGGAGGGGGTCTTATAGCTGGCATTGCTGCTTATATGAAAAAA
GTCTCCCCTGATACGAAGATTATTGGTGTTGAGCCAGTCGATTCCAATTCAATGGCGTTG
GCATTACACCACGGTCAAAGAGTAATGCTGGAAAAAGTTGGATCTTTTGCAGATGCAGTA
GCTATTAGAATGGTTGGTGAAGAAAGTTTCCGTCTCTGCAAGGAACTAATAGATGGGATT
GTCCTAGTTAATCATGATTCTATAAGTGCATCGATAAAGGACATGTTCGAAGAGAAAAGA
AGCATACTAGAGCCAGCAGGTGCACTTGCCCTAGCTGGAGCTGAAGCATACTGTAAGTAC
TATGGTGTAAAGGGAGAAAACGTCGTAGCAATAACTAGTGGAGCCAACATGAACTTTGAC
AGACTTAGATTGGTAACTGAACTCGCGGATGTTGGTAGACAGAGGGAAGCTGTTCTCTCT
ACTTATATGCCTGAAGAACGAGGCAGCTTCAAAAAGTTCTACGAGATGATGGGACATACT
AATATTACTGAATTGAAGTACAGATATGATTCTGAGAAAGAAAATGCTCGAGTATTTTAC
AGAGTTGGTCTTCACACGAAAGTGGAACTCGAAGAAATGGTGGACAGGATGGAATCATCA
CAACTGCATACGATTAATTATACAGATAATGAATTGGTTAAAGATCATCTAAGACATCTG
ATAGGTGGGAGATCAGATGTACACAATGAGCATCTCTGTCGATTCATTTTCCCAGACAAG
CCTGGTGTTTTGATGAAGTTTTTAGACGCTTTCAGCCCAAGTTGGAATATAAGTTTGTTA
CATTACCGTGCACAGGGAGAAACTGGCGGGAATGTGCTAATCGGACTCCAAGTTCCACAG
AACGAGGTTGATGAATTCAGGGGTCGAGCTGAGAGTCTTGGTTATGTGTATGTTGTGGAG
ACTCTCAATGAAGCTTTCCAGCAACTAATGCATTGA