Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400097473
CDS Infomation

pacid=37424866 polypeptide=PGSC0003DMP400069148 locus=PGSC0003DMG400047044 ID=PGSC0003DMT400097473.v4.03 annot-version=v4.03
Sequence

ATGAGTCTTTCAACAACAATTACTACTTGGGGTTACACCCATTATCCCCTTTCTGACGTT
GGAAATAAAGGCAGATCCAGATTTTGCTCTCCCGGATTCATGCCTCATCTGAAGATGAAA
TTCTCCACTAACCCTTCTTCTCTTTCTGTCTCAGCTGTTCTTACAAAGGAGCAGACAGAT
GCGGAGAGCAAGAGCAAGAAACAAGCAATGGAGTTTAAAGAATACGTTCTTGAAAAGGCT
ATTTCTGTCAACAAGGCTTTGGAATCTGCAGTCTCTATCAAGGAACCGGTCAAGATTCAT
GAGTCCATGAGGTACTCTCTTCTTGCTGGTGGGAAAAGAATCAGACCCATGTTGTGTATA
GCTGCTTGTGAGCTTGTTGGTGGGGTTGAGTCCACAGCCATGCCAGCAGCTTGTGCTGTT
GAGATGATTCATACCATGTCTTTGATTCATGATGACCTTCCTTGTATGGATAATGATGAT
CTTAGAAGAGGGAAACCAACAAATCACAAGATTTATGGTGAGGATGTGGCTGTTTTAGCA
GGGGATGCACTTCTTGCATTAGCCTTTGAGCACATTGCTCAAACAAAAGGGGTTTCTTCT
GATAGAATTGTGAGGGTGATTGGTGAGTTGGCCAAGTGTATTGGGTCAGAGGGACTTGTA
GCTGGTCAGGTTGTAGATATAATTTCAGAAGGCATTTCTGATGTTGATTTGAAGCATTTA
GAGTTCATTCATCTGCACAAGACTGCAGCTTTGTTAGAAGGGTCAGTGGTGCTAGGGGCT
ATATTAGGAGGGGCACCAGATGAAGATGTGGAGAAGCTGAGGAAGTTTGCAAGATGTATT
GGGTTGCTATTTCAAGTTGTGGATGATATTCTTGATGTCACAAAGTCTTCTCAGCAATTG
GGGAAAACAGCTGGGAAGGACTTGGTTGCTGATAAGGTAACTTATCCCAAACTGATAGGT
ATTGAGAAGTCTAGGGAGTTTGCTGAGGAGTTAAACAAAGAAGCAAAAGCTCAGCTTGTT
GGATTTGATCAAGAGAAAGCAGCTCCATTGTTTGCTCTTGCAGATTATATTGCTTACAGA
GAGAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400069148
PEP Infomation

pacid=37424866 transcript=PGSC0003DMT400097473 locus=PGSC0003DMG400047044 ID=PGSC0003DMT400097473.v4.03 annot-version=v4.03
Sequence

MSLSTTITTWGYTHYPLSDVGNKGRSRFCSPGFMPHLKMKFSTNPSSLSVSAVLTKEQTD
AESKSKKQAMEFKEYVLEKAISVNKALESAVSIKEPVKIHESMRYSLLAGGKRIRPMLCI
AACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLA
GDALLALAFEHIAQTKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDIISEGISDVDLKHL
EFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQL
GKTAGKDLVADKVTYPKLIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALADYIAYR
EN*

Transcript Sequence

Transcript ID

PGSC0003DMT400097473
Transcript Infomation

pacid=37424866 locus=PGSC0003DMG400047044 ID=PGSC0003DMT400097473.v4.03 annot-version=v4.03
Sequence

ATGAGTCTTTCAACAACAATTACTACTTGGGGTTACACCCATTATCCCCTTTCTGACGTT
GGAAATAAAGGCAGATCCAGATTTTGCTCTCCCGGATTCATGCCTCATCTGAAGATGAAA
TTCTCCACTAACCCTTCTTCTCTTTCTGTCTCAGCTGTTCTTACAAAGGAGCAGACAGAT
GCGGAGAGCAAGAGCAAGAAACAAGCAATGGAGTTTAAAGAATACGTTCTTGAAAAGGCT
ATTTCTGTCAACAAGGCTTTGGAATCTGCAGTCTCTATCAAGGAACCGGTCAAGATTCAT
GAGTCCATGAGGTACTCTCTTCTTGCTGGTGGGAAAAGAATCAGACCCATGTTGTGTATA
GCTGCTTGTGAGCTTGTTGGTGGGGTTGAGTCCACAGCCATGCCAGCAGCTTGTGCTGTT
GAGATGATTCATACCATGTCTTTGATTCATGATGACCTTCCTTGTATGGATAATGATGAT
CTTAGAAGAGGGAAACCAACAAATCACAAGATTTATGGTGAGGATGTGGCTGTTTTAGCA
GGGGATGCACTTCTTGCATTAGCCTTTGAGCACATTGCTCAAACAAAAGGGGTTTCTTCT
GATAGAATTGTGAGGGTGATTGGTGAGTTGGCCAAGTGTATTGGGTCAGAGGGACTTGTA
GCTGGTCAGGTTGTAGATATAATTTCAGAAGGCATTTCTGATGTTGATTTGAAGCATTTA
GAGTTCATTCATCTGCACAAGACTGCAGCTTTGTTAGAAGGGTCAGTGGTGCTAGGGGCT
ATATTAGGAGGGGCACCAGATGAAGATGTGGAGAAGCTGAGGAAGTTTGCAAGATGTATT
GGGTTGCTATTTCAAGTTGTGGATGATATTCTTGATGTCACAAAGTCTTCTCAGCAATTG
GGGAAAACAGCTGGGAAGGACTTGGTTGCTGATAAGGTAACTTATCCCAAACTGATAGGT
ATTGAGAAGTCTAGGGAGTTTGCTGAGGAGTTAAACAAAGAAGCAAAAGCTCAGCTTGTT
GGATTTGATCAAGAGAAAGCAGCTCCATTGTTTGCTCTTGCAGATTATATTGCTTACAGA
GAGAATTAA