Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400097320
CDS Infomation

pacid=37447938 polypeptide=PGSC0003DMP400068995 locus=PGSC0003DMG400046891 ID=PGSC0003DMT400097320.v4.03 annot-version=v4.03
Sequence

ATGGCGGCATCTATAGGAACATTGAAACCTTTTCAGCATTCTATAATCGATAATGTTGAT
AGTGCAATGTCCTTTCAAAGTCTCTCTTTTGCATCATCACATTTATCCAGCGGCAAATTG
ATCTCACCTAAATCATTGCGTTCTAGACGATTCATTTCTAATAAGAACGCCTATCATAGC
AGGGCTGCGATTATTGTGTCGCCTAAAGCTGTTTCTGACTCGTCAAATTCACAAACATGT
CTTGATCCAGAAGCTAGCCGAAGTGTTTTGGGTATTATTCTTGGAGGTGGAGCTGGGACG
CGTCTGTATCCTCTAACCAAAAAGAGAGCAAAGCCGGCTGTTCCGCTTGGAGCAAATTAT
CGTCTGATTGATATTCCTGTGAGCAATTGTATTAACAGTACCATATCCAAGATCTATGTT
CTCACACAATTCAACTCTGCATCTCTAAATCGCCATCTTTCACGAGCTTATGCAAGTAAC
ATGGGTAGTTACAAAAATGAAGGTTTTGTGGAAGTTCTCGCTGCTCAGCAAAGTCCAGAA
AACCCTGATTGGTTTCAGGGCACTGCTGATGCGGTCAGACAGTATTTATGGTTGTTTGAG
GAGCATAATGTTTTGGAATTTCTAATACTTGCGGGAGATCATCTGTACAGAATGGATTAT
GAAAAGTTCATTCTAGCCCATAGAGAAGCAGATGCTGATATTACTGTTGCTGCACTTCCG
ATGGATGAAAAGCGTGCCTCTTCATTTGGTCTAATGAAGATTGATGAAGAAGGACGCATC
ATTGAATTCGCAGAAAAACCAAATGGAGAGCAGTTGAAAGAAATGCAGGTGGATACTACT
ATTTTAGGCCTTGATGACGAAAGAGCTAAAGAGAACCCTTATATTGCAAGTATGGGTATA
TATGTCATTAGCAAAGATGTGATGTTAAACCTACTTCGGCAAAGCTTTCCTGCAGCTAAT
GACTTTGGCAGTGAAGTTATTCCTGGTGCAACTTCCATTGGAATGCGAGTGCAAGCTTAT
TTATTTGATGACTACTGGGAGGATATTGGTACCATTGAAGCTTTCTACAATGCTAATTTG
GGCATTACAAAAAAGCCAGTGCCAGATTTTAGTTTCTATGACCGTTCAGCTCCAATCTAC
ACCCAACCTCGATATTTGCCTCCTTCAAAGATGCTTGATACTGATATAACAGATAGCGTC
ATTGGTGAAGGTTGTGTCATCAAGAACTGTAAAATTCACCATTCTGTGATTGGACTCAGA
TCATGCATTTCAGCAGGAACAATTATCGAAGACACTCTTTTGATGGGAGCAGATTATTAT
GAGACGAATGATGACAAAATGCTTCTGTATGCAAAGGGTAGTGTTCCAATTGGCATCGGC
AAGAACTGCCACATAAAGAGAGCTATTATTGACAAGAATGCTCGTATAGGGGACAATGTG
AAGATCATCAATATTGACAATATTCAAGAAGTAGCAAGGGAGGCAGACGGATACTTTATT
AAGAGCGGAATTGTTACCGTTATCAAGGATGCAGTAATTCCCAGTGGTACTATCATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400068995
PEP Infomation

pacid=37447938 transcript=PGSC0003DMT400097320 locus=PGSC0003DMG400046891 ID=PGSC0003DMT400097320.v4.03 annot-version=v4.03
Sequence

MAASIGTLKPFQHSIIDNVDSAMSFQSLSFASSHLSSGKLISPKSLRSRRFISNKNAYHS
RAAIIVSPKAVSDSSNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANY
RLIDIPVSNCINSTISKIYVLTQFNSASLNRHLSRAYASNMGSYKNEGFVEVLAAQQSPE
NPDWFQGTADAVRQYLWLFEEHNVLEFLILAGDHLYRMDYEKFILAHREADADITVAALP
MDEKRASSFGLMKIDEEGRIIEFAEKPNGEQLKEMQVDTTILGLDDERAKENPYIASMGI
YVISKDVMLNLLRQSFPAANDFGSEVIPGATSIGMRVQAYLFDDYWEDIGTIEAFYNANL
GITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDTDITDSVIGEGCVIKNCKIHHSVIGLR
SCISAGTIIEDTLLMGADYYETNDDKMLLYAKGSVPIGIGKNCHIKRAIIDKNARIGDNV
KIINIDNIQEVAREADGYFIKSGIVTVIKDAVIPSGTII*

Transcript Sequence

Transcript ID

PGSC0003DMT400097320
Transcript Infomation

pacid=37447938 locus=PGSC0003DMG400046891 ID=PGSC0003DMT400097320.v4.03 annot-version=v4.03
Sequence

ATGGCGGCATCTATAGGAACATTGAAACCTTTTCAGCATTCTATAATCGATAATGTTGAT
AGTGCAATGTCCTTTCAAAGTCTCTCTTTTGCATCATCACATTTATCCAGCGGCAAATTG
ATCTCACCTAAATCATTGCGTTCTAGACGATTCATTTCTAATAAGAACGCCTATCATAGC
AGGGCTGCGATTATTGTGTCGCCTAAAGCTGTTTCTGACTCGTCAAATTCACAAACATGT
CTTGATCCAGAAGCTAGCCGAAGTGTTTTGGGTATTATTCTTGGAGGTGGAGCTGGGACG
CGTCTGTATCCTCTAACCAAAAAGAGAGCAAAGCCGGCTGTTCCGCTTGGAGCAAATTAT
CGTCTGATTGATATTCCTGTGAGCAATTGTATTAACAGTACCATATCCAAGATCTATGTT
CTCACACAATTCAACTCTGCATCTCTAAATCGCCATCTTTCACGAGCTTATGCAAGTAAC
ATGGGTAGTTACAAAAATGAAGGTTTTGTGGAAGTTCTCGCTGCTCAGCAAAGTCCAGAA
AACCCTGATTGGTTTCAGGGCACTGCTGATGCGGTCAGACAGTATTTATGGTTGTTTGAG
GAGCATAATGTTTTGGAATTTCTAATACTTGCGGGAGATCATCTGTACAGAATGGATTAT
GAAAAGTTCATTCTAGCCCATAGAGAAGCAGATGCTGATATTACTGTTGCTGCACTTCCG
ATGGATGAAAAGCGTGCCTCTTCATTTGGTCTAATGAAGATTGATGAAGAAGGACGCATC
ATTGAATTCGCAGAAAAACCAAATGGAGAGCAGTTGAAAGAAATGCAGGTGGATACTACT
ATTTTAGGCCTTGATGACGAAAGAGCTAAAGAGAACCCTTATATTGCAAGTATGGGTATA
TATGTCATTAGCAAAGATGTGATGTTAAACCTACTTCGGCAAAGCTTTCCTGCAGCTAAT
GACTTTGGCAGTGAAGTTATTCCTGGTGCAACTTCCATTGGAATGCGAGTGCAAGCTTAT
TTATTTGATGACTACTGGGAGGATATTGGTACCATTGAAGCTTTCTACAATGCTAATTTG
GGCATTACAAAAAAGCCAGTGCCAGATTTTAGTTTCTATGACCGTTCAGCTCCAATCTAC
ACCCAACCTCGATATTTGCCTCCTTCAAAGATGCTTGATACTGATATAACAGATAGCGTC
ATTGGTGAAGGTTGTGTCATCAAGAACTGTAAAATTCACCATTCTGTGATTGGACTCAGA
TCATGCATTTCAGCAGGAACAATTATCGAAGACACTCTTTTGATGGGAGCAGATTATTAT
GAGACGAATGATGACAAAATGCTTCTGTATGCAAAGGGTAGTGTTCCAATTGGCATCGGC
AAGAACTGCCACATAAAGAGAGCTATTATTGACAAGAATGCTCGTATAGGGGACAATGTG
AAGATCATCAATATTGACAATATTCAAGAAGTAGCAAGGGAGGCAGACGGATACTTTATT
AAGAGCGGAATTGTTACCGTTATCAAGGATGCAGTAATTCCCAGTGGTACTATCATCTAA