Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400097039
CDS Infomation

pacid=37465050 polypeptide=PGSC0003DMP400068714 locus=PGSC0003DMG400046610 ID=PGSC0003DMT400097039.v4.03 annot-version=v4.03
Sequence

ATGTTTCACCTCTTATTTGTGGTGTTTTTGTTGGTGAATGTGGCAACTTGTGAAGATGCA
GATGGAAGAAAGAGGGGTTTGATTCCTGCCATGTTTATATTTGGAGACTCTCTGATTGAC
AATGGCAATAATAATAATTTGCCATCTTTTGCAAAGGCCAACTATTACCCTTATGGAATT
GATTTTGATGGTGGCCCTACTGGTCGTTTTTCCAATGGTTACACTATGGTTGATGAAATT
GCTGAACAACTAGGACTACCACTGATTCCAGCACACTCAGAAGCTTCATCAGGAGAACAA
ATGCGGTTTGGAGTAAACTATGCCTCTGCTGCTGCTGGCATTCTTGATGATACTGGCAGG
AACTTTGTTGGGCGCATTCCATTCAATCAACAAATAAAAAACTTTGAGGATACACTTGAT
GAAATAACAGACAATCTTGGTGCACCGGATGTGGCACAAGCATTAGCTAAATGCATTTTC
TTTGTAGGAATGGGAAGTAATGACTACCTCAACAATTACCTTATGCCTAATTATGATACT
AAGAATCACTATAATCCTCAACAATATGCCAATCTCTTGGTTCAACAGTATACCCAACAA
CTCACTAGATTGTATAATCTTGGAGGAAGAAAATTTGTGATTGGTGGAGTAGGACTAATG
GGTTGCATTCCAAGCATTCTTGCAAAAAGTAATAGTAATGTGTGTTCAGAAGAAGTGAAT
GAGCTTATTCTTCCATTCACTAATAATGTTAAGTCAATGCTGCTTACCAACTTAAATGTC
AATCTTCCTGGTTCCAAATTCATCTACATTGACATTAAGAACATGTTCCAAGATCTCCTT
ACCAATTACAGACAATATGGATTTAGTGTGATAAATAGAGGGTGCTGTGGTATAGGGAGA
AATAGAGGACAAATAACATGTCTACCAATGCAAACACCATGTCCAAATAGGGATCAATAC
ATATTTTGGGATGCCTTTCACCCAACAGAGGCAGTCAACATCTTGTTTGCAAGGAAAGCT
TTTAATGGTGGTCCTGATGTTGTTTATCCCATCAACATTCACCAACTTGCCACCCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400068714
PEP Infomation

pacid=37465050 transcript=PGSC0003DMT400097039 locus=PGSC0003DMG400046610 ID=PGSC0003DMT400097039.v4.03 annot-version=v4.03
Sequence

MFHLLFVVFLLVNVATCEDADGRKRGLIPAMFIFGDSLIDNGNNNNLPSFAKANYYPYGI
DFDGGPTGRFSNGYTMVDEIAEQLGLPLIPAHSEASSGEQMRFGVNYASAAAGILDDTGR
NFVGRIPFNQQIKNFEDTLDEITDNLGAPDVAQALAKCIFFVGMGSNDYLNNYLMPNYDT
KNHYNPQQYANLLVQQYTQQLTRLYNLGGRKFVIGGVGLMGCIPSILAKSNSNVCSEEVN
ELILPFTNNVKSMLLTNLNVNLPGSKFIYIDIKNMFQDLLTNYRQYGFSVINRGCCGIGR
NRGQITCLPMQTPCPNRDQYIFWDAFHPTEAVNILFARKAFNGGPDVVYPINIHQLATL*

Transcript Sequence

Transcript ID

PGSC0003DMT400097039
Transcript Infomation

pacid=37465050 locus=PGSC0003DMG400046610 ID=PGSC0003DMT400097039.v4.03 annot-version=v4.03
Sequence

ATGTTTCACCTCTTATTTGTGGTGTTTTTGTTGGTGAATGTGGCAACTTGTGAAGATGCA
GATGGAAGAAAGAGGGGTTTGATTCCTGCCATGTTTATATTTGGAGACTCTCTGATTGAC
AATGGCAATAATAATAATTTGCCATCTTTTGCAAAGGCCAACTATTACCCTTATGGAATT
GATTTTGATGGTGGCCCTACTGGTCGTTTTTCCAATGGTTACACTATGGTTGATGAAATT
GCTGAACAACTAGGACTACCACTGATTCCAGCACACTCAGAAGCTTCATCAGGAGAACAA
ATGCGGTTTGGAGTAAACTATGCCTCTGCTGCTGCTGGCATTCTTGATGATACTGGCAGG
AACTTTGTTGGGCGCATTCCATTCAATCAACAAATAAAAAACTTTGAGGATACACTTGAT
GAAATAACAGACAATCTTGGTGCACCGGATGTGGCACAAGCATTAGCTAAATGCATTTTC
TTTGTAGGAATGGGAAGTAATGACTACCTCAACAATTACCTTATGCCTAATTATGATACT
AAGAATCACTATAATCCTCAACAATATGCCAATCTCTTGGTTCAACAGTATACCCAACAA
CTCACTAGATTGTATAATCTTGGAGGAAGAAAATTTGTGATTGGTGGAGTAGGACTAATG
GGTTGCATTCCAAGCATTCTTGCAAAAAGTAATAGTAATGTGTGTTCAGAAGAAGTGAAT
GAGCTTATTCTTCCATTCACTAATAATGTTAAGTCAATGCTGCTTACCAACTTAAATGTC
AATCTTCCTGGTTCCAAATTCATCTACATTGACATTAAGAACATGTTCCAAGATCTCCTT
ACCAATTACAGACAATATGGATTTAGTGTGATAAATAGAGGGTGCTGTGGTATAGGGAGA
AATAGAGGACAAATAACATGTCTACCAATGCAAACACCATGTCCAAATAGGGATCAATAC
ATATTTTGGGATGCCTTTCACCCAACAGAGGCAGTCAACATCTTGTTTGCAAGGAAAGCT
TTTAATGGTGGTCCTGATGTTGTTTATCCCATCAACATTCACCAACTTGCCACCCTTTAA