Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400096975
CDS Infomation

pacid=37431522 polypeptide=PGSC0003DMP400068650 locus=PGSC0003DMG400046546 ID=PGSC0003DMT400096975.v4.03 annot-version=v4.03
Sequence

ATGGATGAAGAGGAAATTCCTGTTGTTGATACTCAATCCCTTACCATCAAGATTGCAAAT
TCAGGTCAGCAAAAACTGACAGCAACATCATCTCCATATAACTCACCTTCTCTCATTTCT
CCTCCATCTTCTGCATTTGTTTCAGCATTACAATCACCTTACATTTCTCCAAGAGCCACT
TTAGTTACAAATCCAACTCAAGAAAATCAAGAAACTCTCATTGCTTCTCTTACCTCAGTT
GTCCATCCATCCCCACCAGTCTCATACTGCGGTTCGCAATCTGATGATGTTCCCAGCACC
TCCTACACTCCACCACCAGAAAGATATGATTTTTCTGATGATCCTACAGGCACAAAGCTC
AAGATTGTCACCTGTGTCCCAGTTTCAGGACCGGAAACCGATCCCAGGATATCATTTTCT
TTCCCTGTCCCTCGAATTTCGTTTGCCAAGGGGTCAGTTTCACCGGCTTCCAATGCTAAA
CTTAGGAGCTGTGATGTGTATATAGGATTCCATGGTCAGAACCCGAATTTAGTACGCTTC
TGTAAGTGGCTCAAATCAGAACTTGAGCTTCAGGGAATTGCTTGTTTTATTGCTGATAGA
GCAAAGTATGCAGATAATCAGAGCCATGAGATTGCTGACAGAGTTATATGCTCAGTAACC
TTTGGTGTCATAGTTGTCACTGGTTGTAGCTTTTTCAACCATCTTAGCTTGGAGGAAATA
AGATTCTTCGCGCAAAAGAAGAACTTGATTCCTTTGTTCTTTAACACGGATGCCAATGAA
ATTGCAAGTCTTTCTAACTGTAATGGTGATACCAAGAAATGTAAAGAGGCACTGGATGTA
ATACTTAAGTGCCATGAGTTTAGATTGGAGACAGATGAGAGTAATTGGAGATCTTGTGTG
TCGAAAGCAGCTGGGATATTAAGGGCCAAGCTTGGTAGGAAAAGTGTTGTAGAAAAGTGT
ACAGAAGGCTTTGAAGAGTTGCCCTTTCCAAGGAATAAAAGTTTTGTGGGAAGAGAGAAG
GAAATTATCGATATAGAGACGACTCTTTTTGGCTGTGGTGATTCTTTCGATCAAGAAAGT
TCTGTCCCAAGTGTCAAAGGAGGAACACCAGGACAATCTGAAGGTCTGGCTGATGATGAA
AGTGAAGCTGATGTTGGCAGAGGCAAATACATAAATCTAGAGCTAGGAAAGAACAAGGAA
ACAAATAAAGAAGCTTGGGCTGAACGAAATTCGCTGAAGAGATCCAAGTACAAAAAATCA
AGAAGTGGGAAGGATATGAATTTGAGAATGAGTGTTGTATGCATAAATGGGTTGGCTGGT
GTTGGAAAGACGGACCTCGCTTTGGAATTCGCTTACAGGTATTCACAGAGATACAAGATG
GTCTTGTGGGTAGGGGGTGAAGCTCGCTATTTTCGACAGAACATATTGAACTTGTCTCTA
AATTTGGAACTGGATGTGAGTGCAGATGCAGAGAAGGAAAGAGGGAGGATAAGGAGTTTT
GATGAGCAAGAATCGGAAGCATTCAAGAGAGTTAAAAGGGAGATGTTCCGCGACATGCCA
TATTTACTAATTATAGACAATTTAGAGACTGAGAAGGAGTGGTGGGAAGGGAAGGATCTT
CATGATTTGATACCAACTAACACTGGCGGTACCCATGTAATTATCACAACACAACTCAAC
CGAGTAATGAACTTTGATCCGTTGCAGCTGCAGCCATTGACCACACCTGATGCCATGATA
TTGATAAGGGGAAGACGTAAAAGGGAGTATCCGGCTGGTGAGGTAGAATTCCTCCATAAA
TTTGATGAGAAATTGGGAAGGTCTAGTTTTGGTCTGTGGGTGGTTGGTTCCTTGCTATCG
GAGCTTGCAATATTGCCCTCTGCTCTATTCGAAGATGTGAATCAGGTTCCAGTTGAAGAA
ACCACAAGTTGCTCTAATCTATCCATTCCACATCAACAATTCTGTAGAACCAATCCATTT
TTAATGAAAACATTGATTTTTTGTACAACCCTCTTGCAGCAAAGCAGCGATAGCAGGGAC
TCCGTTGCTTCAAGAATGCTTCAGGTAGGGGCATGGTTTGCTCCAGCACCCATCTCGGTG
AATTTACTGGCAGCAGCTGCAAAGAAAATTCCTGTAAACACAAACAGGTTCAAAAAGTGG
ACTAATTGTATGAGAGTTGCTCTATGCTTCTACTCAGGTCACTGCCTCACAAGCCAAGCA
TGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTTAAACTTGGTTTGGCACGAAAAGCA
AACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACGCAGATTTTTGCGAAAAGG
AAAGATGGACTAGTTGCTGCTAAAGCCAATGTTCAAGGTGCAAGGAAACTTGGAAACCCG
GTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCCGAA
CCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTT
CCTTTAGCAATCAGTGCCTTCACAACATTCTCAAGATGCAACTCGGCCTTAGAACTCTTG
AAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGAT
TGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTTCAATCTAACCAAAGAGTGGACGAG
TATGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTG
CTACTAAGAGGAGGTCATTTCGATAGCGGAGAGGATCTTTGCAGAACCTGCATTAGTATC
CGAACCGTAATGTTGGGTCATAACCATGCTCAAACTTTGGCTGCTCAACAAACATTAGCC
AAATTAGTAAGGATGAGGAGCAAAATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400068650
PEP Infomation

pacid=37431522 transcript=PGSC0003DMT400096975 locus=PGSC0003DMG400046546 ID=PGSC0003DMT400096975.v4.03 annot-version=v4.03
Sequence

MDEEEIPVVDTQSLTIKIANSGQQKLTATSSPYNSPSLISPPSSAFVSALQSPYISPRAT
LVTNPTQENQETLIASLTSVVHPSPPVSYCGSQSDDVPSTSYTPPPERYDFSDDPTGTKL
KIVTCVPVSGPETDPRISFSFPVPRISFAKGSVSPASNAKLRSCDVYIGFHGQNPNLVRF
CKWLKSELELQGIACFIADRAKYADNQSHEIADRVICSVTFGVIVVTGCSFFNHLSLEEI
RFFAQKKNLIPLFFNTDANEIASLSNCNGDTKKCKEALDVILKCHEFRLETDESNWRSCV
SKAAGILRAKLGRKSVVEKCTEGFEELPFPRNKSFVGREKEIIDIETTLFGCGDSFDQES
SVPSVKGGTPGQSEGLADDESEADVGRGKYINLELGKNKETNKEAWAERNSLKRSKYKKS
RSGKDMNLRMSVVCINGLAGVGKTDLALEFAYRYSQRYKMVLWVGGEARYFRQNILNLSL
NLELDVSADAEKERGRIRSFDEQESEAFKRVKREMFRDMPYLLIIDNLETEKEWWEGKDL
HDLIPTNTGGTHVIITTQLNRVMNFDPLQLQPLTTPDAMILIRGRRKREYPAGEVEFLHK
FDEKLGRSSFGLWVVGSLLSELAILPSALFEDVNQVPVEETTSCSNLSIPHQQFCRTNPF
LMKTLIFCTTLLQQSSDSRDSVASRMLQVGAWFAPAPISVNLLAAAAKKIPVNTNRFKKW
TNCMRVALCFYSGHCLTSQAWKSEEESALLLVKLGLARKANRQTGCWIQFHPITQIFAKR
KDGLVAAKANVQGARKLGNPVTDSDHLWACAFLVFGFKSEPPVVQLKAMDMVFFIRKTAL
PLAISAFTTFSRCNSALELLKVCTNVLEEAEKSFVSQIQDWCHGSLCWKKKLQSNQRVDE
YVWQEVTLLKATLLETRAKLLLRGGHFDSGEDLCRTCISIRTVMLGHNHAQTLAAQQTLA
KLVRMRSKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400096975
Transcript Infomation

pacid=37431522 locus=PGSC0003DMG400046546 ID=PGSC0003DMT400096975.v4.03 annot-version=v4.03
Sequence

ATGGATGAAGAGGAAATTCCTGTTGTTGATACTCAATCCCTTACCATCAAGATTGCAAAT
TCAGGTCAGCAAAAACTGACAGCAACATCATCTCCATATAACTCACCTTCTCTCATTTCT
CCTCCATCTTCTGCATTTGTTTCAGCATTACAATCACCTTACATTTCTCCAAGAGCCACT
TTAGTTACAAATCCAACTCAAGAAAATCAAGAAACTCTCATTGCTTCTCTTACCTCAGTT
GTCCATCCATCCCCACCAGTCTCATACTGCGGTTCGCAATCTGATGATGTTCCCAGCACC
TCCTACACTCCACCACCAGAAAGATATGATTTTTCTGATGATCCTACAGGCACAAAGCTC
AAGATTGTCACCTGTGTCCCAGTTTCAGGACCGGAAACCGATCCCAGGATATCATTTTCT
TTCCCTGTCCCTCGAATTTCGTTTGCCAAGGGGTCAGTTTCACCGGCTTCCAATGCTAAA
CTTAGGAGCTGTGATGTGTATATAGGATTCCATGGTCAGAACCCGAATTTAGTACGCTTC
TGTAAGTGGCTCAAATCAGAACTTGAGCTTCAGGGAATTGCTTGTTTTATTGCTGATAGA
GCAAAGTATGCAGATAATCAGAGCCATGAGATTGCTGACAGAGTTATATGCTCAGTAACC
TTTGGTGTCATAGTTGTCACTGGTTGTAGCTTTTTCAACCATCTTAGCTTGGAGGAAATA
AGATTCTTCGCGCAAAAGAAGAACTTGATTCCTTTGTTCTTTAACACGGATGCCAATGAA
ATTGCAAGTCTTTCTAACTGTAATGGTGATACCAAGAAATGTAAAGAGGCACTGGATGTA
ATACTTAAGTGCCATGAGTTTAGATTGGAGACAGATGAGAGTAATTGGAGATCTTGTGTG
TCGAAAGCAGCTGGGATATTAAGGGCCAAGCTTGGTAGGAAAAGTGTTGTAGAAAAGTGT
ACAGAAGGCTTTGAAGAGTTGCCCTTTCCAAGGAATAAAAGTTTTGTGGGAAGAGAGAAG
GAAATTATCGATATAGAGACGACTCTTTTTGGCTGTGGTGATTCTTTCGATCAAGAAAGT
TCTGTCCCAAGTGTCAAAGGAGGAACACCAGGACAATCTGAAGGTCTGGCTGATGATGAA
AGTGAAGCTGATGTTGGCAGAGGCAAATACATAAATCTAGAGCTAGGAAAGAACAAGGAA
ACAAATAAAGAAGCTTGGGCTGAACGAAATTCGCTGAAGAGATCCAAGTACAAAAAATCA
AGAAGTGGGAAGGATATGAATTTGAGAATGAGTGTTGTATGCATAAATGGGTTGGCTGGT
GTTGGAAAGACGGACCTCGCTTTGGAATTCGCTTACAGGTATTCACAGAGATACAAGATG
GTCTTGTGGGTAGGGGGTGAAGCTCGCTATTTTCGACAGAACATATTGAACTTGTCTCTA
AATTTGGAACTGGATGTGAGTGCAGATGCAGAGAAGGAAAGAGGGAGGATAAGGAGTTTT
GATGAGCAAGAATCGGAAGCATTCAAGAGAGTTAAAAGGGAGATGTTCCGCGACATGCCA
TATTTACTAATTATAGACAATTTAGAGACTGAGAAGGAGTGGTGGGAAGGGAAGGATCTT
CATGATTTGATACCAACTAACACTGGCGGTACCCATGTAATTATCACAACACAACTCAAC
CGAGTAATGAACTTTGATCCGTTGCAGCTGCAGCCATTGACCACACCTGATGCCATGATA
TTGATAAGGGGAAGACGTAAAAGGGAGTATCCGGCTGGTGAGGTAGAATTCCTCCATAAA
TTTGATGAGAAATTGGGAAGGTCTAGTTTTGGTCTGTGGGTGGTTGGTTCCTTGCTATCG
GAGCTTGCAATATTGCCCTCTGCTCTATTCGAAGATGTGAATCAGGTTCCAGTTGAAGAA
ACCACAAGTTGCTCTAATCTATCCATTCCACATCAACAATTCTGTAGAACCAATCCATTT
TTAATGAAAACATTGATTTTTTGTACAACCCTCTTGCAGCAAAGCAGCGATAGCAGGGAC
TCCGTTGCTTCAAGAATGCTTCAGGTAGGGGCATGGTTTGCTCCAGCACCCATCTCGGTG
AATTTACTGGCAGCAGCTGCAAAGAAAATTCCTGTAAACACAAACAGGTTCAAAAAGTGG
ACTAATTGTATGAGAGTTGCTCTATGCTTCTACTCAGGTCACTGCCTCACAAGCCAAGCA
TGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTTAAACTTGGTTTGGCACGAAAAGCA
AACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACGCAGATTTTTGCGAAAAGG
AAAGATGGACTAGTTGCTGCTAAAGCCAATGTTCAAGGTGCAAGGAAACTTGGAAACCCG
GTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCCGAA
CCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTT
CCTTTAGCAATCAGTGCCTTCACAACATTCTCAAGATGCAACTCGGCCTTAGAACTCTTG
AAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGAT
TGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTTCAATCTAACCAAAGAGTGGACGAG
TATGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTG
CTACTAAGAGGAGGTCATTTCGATAGCGGAGAGGATCTTTGCAGAACCTGCATTAGTATC
CGAACCGTAATGTTGGGTCATAACCATGCTCAAACTTTGGCTGCTCAACAAACATTAGCC
AAATTAGTAAGGATGAGGAGCAAAATATGA