Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400096875
CDS Infomation

pacid=37443109 polypeptide=PGSC0003DMP400068550 locus=PGSC0003DMG400046446 ID=PGSC0003DMT400096875.v4.03 annot-version=v4.03
Sequence

ATGAACTCCACTCTTCCCCTTTCTCAATCACCCCAAATAACTCAACCCATTTTACCCTCT
TCTCCTAATAAACTCCCTATCAAACGCAAAGCAACAGACGACCCCTTTACCTCCGCCGCC
GGCACCGGCGCCGGCGACGGTGGTGGTGCCAATGGAGGAGTCGGAGAAATGGGTTCGGAC
CCAAAACCCCCACCATTCAAATTTCATAGAATATGGACTGAACCGGATGAGATCCGGTTT
CTTCAAGGTCTACTTGATGGGTCATCGGAAAATCTCTTCTTCCCTCGTGATCTTAATGTT
TTCTATACTCGTTTTTCGAACACTATGTCTCAGCCTTATACGAAATCTCAGCTTTCAGAG
AAGCTTCGTAGGCTTCGGAAGAAGTTTCGGGTTATTTCTTCTCGTTTGAGTAAAGGGTTA
GATAGGTCGTTGTTGTCTCCTCATGATCGTGCTTTGTATGATCTATCGAAACAGCTATGG
CATCCTGATTTTTCTGATACGTCGCCTTTTAATGCTGAGAAATCGAAGAAATCGAATTTG
GTTGGGGTGAAGGTTAGTTTTTTGCCGAATATTTATGACCCGGATCGATATGGTATTGTT
CCCTACCAAGATGGGAATGGGTCGACCTGTAATGGGGTTTCAGTGAATGAGGAAGTGGAA
CAAGGTGAAGATGAAGAGAATGATGGTAATATTGAGTTTGATGATGAAGATGGGAAGTTG
AGTGAGGTGAATGTGGAATTGGATAGAGGGGAGATAGGGGATGAACGGGTTGAATTTAGT
CGTGTGAATGGTCCGGTTCGGGTTGGAGTAGGATTTGGTGCAGGGGATATTGCTGCAAAA
GTGGTGATGGATGTGTTTGATGAGTGTTTGAAAGATTTTAGAAATGGTGTTGTTGGAGAA
AGATCAAATCTTGGTGGTATTTTGAAGAAGGCAAGCTCGGACGAGTTTGAAGAGAGATGG
AAGGAACAAAGAGTCGCGGAGTTGAACGTATTGGCACGTCGTATGAGGTTGGTTCTTGAG
CATTCTCTTCAAAGTCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400068550
PEP Infomation

pacid=37443109 transcript=PGSC0003DMT400096875 locus=PGSC0003DMG400046446 ID=PGSC0003DMT400096875.v4.03 annot-version=v4.03
Sequence

MNSTLPLSQSPQITQPILPSSPNKLPIKRKATDDPFTSAAGTGAGDGGGANGGVGEMGSD
PKPPPFKFHRIWTEPDEIRFLQGLLDGSSENLFFPRDLNVFYTRFSNTMSQPYTKSQLSE
KLRRLRKKFRVISSRLSKGLDRSLLSPHDRALYDLSKQLWHPDFSDTSPFNAEKSKKSNL
VGVKVSFLPNIYDPDRYGIVPYQDGNGSTCNGVSVNEEVEQGEDEENDGNIEFDDEDGKL
SEVNVELDRGEIGDERVEFSRVNGPVRVGVGFGAGDIAAKVVMDVFDECLKDFRNGVVGE
RSNLGGILKKASSDEFEERWKEQRVAELNVLARRMRLVLEHSLQSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400096875
Transcript Infomation

pacid=37443109 locus=PGSC0003DMG400046446 ID=PGSC0003DMT400096875.v4.03 annot-version=v4.03
Sequence

ATGAACTCCACTCTTCCCCTTTCTCAATCACCCCAAATAACTCAACCCATTTTACCCTCT
TCTCCTAATAAACTCCCTATCAAACGCAAAGCAACAGACGACCCCTTTACCTCCGCCGCC
GGCACCGGCGCCGGCGACGGTGGTGGTGCCAATGGAGGAGTCGGAGAAATGGGTTCGGAC
CCAAAACCCCCACCATTCAAATTTCATAGAATATGGACTGAACCGGATGAGATCCGGTTT
CTTCAAGGTCTACTTGATGGGTCATCGGAAAATCTCTTCTTCCCTCGTGATCTTAATGTT
TTCTATACTCGTTTTTCGAACACTATGTCTCAGCCTTATACGAAATCTCAGCTTTCAGAG
AAGCTTCGTAGGCTTCGGAAGAAGTTTCGGGTTATTTCTTCTCGTTTGAGTAAAGGGTTA
GATAGGTCGTTGTTGTCTCCTCATGATCGTGCTTTGTATGATCTATCGAAACAGCTATGG
CATCCTGATTTTTCTGATACGTCGCCTTTTAATGCTGAGAAATCGAAGAAATCGAATTTG
GTTGGGGTGAAGGTTAGTTTTTTGCCGAATATTTATGACCCGGATCGATATGGTATTGTT
CCCTACCAAGATGGGAATGGGTCGACCTGTAATGGGGTTTCAGTGAATGAGGAAGTGGAA
CAAGGTGAAGATGAAGAGAATGATGGTAATATTGAGTTTGATGATGAAGATGGGAAGTTG
AGTGAGGTGAATGTGGAATTGGATAGAGGGGAGATAGGGGATGAACGGGTTGAATTTAGT
CGTGTGAATGGTCCGGTTCGGGTTGGAGTAGGATTTGGTGCAGGGGATATTGCTGCAAAA
GTGGTGATGGATGTGTTTGATGAGTGTTTGAAAGATTTTAGAAATGGTGTTGTTGGAGAA
AGATCAAATCTTGGTGGTATTTTGAAGAAGGCAAGCTCGGACGAGTTTGAAGAGAGATGG
AAGGAACAAAGAGTCGCGGAGTTGAACGTATTGGCACGTCGTATGAGGTTGGTTCTTGAG
CATTCTCTTCAAAGTCTATGA