Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400096640
CDS Infomation

pacid=37476728 polypeptide=PGSC0003DMP400068315 locus=PGSC0003DMG400046211 ID=PGSC0003DMT400096640.v4.03 annot-version=v4.03
Sequence

ATGGATCTGAAATTCATCTCTACCTTTCTCTGCTTTGTCCTGCTTCATTCATCAAAAACA
TTTGGTGATCATTTCACTAATCAAAGTGATTTAGAAACTTATATAGTACATCTTGAATTT
CCTGATCAACTTTTTTCAAATTCCAAAGATTTACTTCTCTGGCATCAATCATTTTTGCCT
ACAAATTCGAATCTCTCATCGCACATTCTATATTCTTATCGTCATGTGTTCAATGGTTTT
GCTGCTATGTTGTCATCAGACGAAGTGACAGAAATGGAAAAGAAGCCAGGTTTTGTGTCA
GCGCGTCCCCAACGAATATTTCAGATGCACACCACACACGCACCAAGTTTCCTTGGCTTG
CACCAGAATGTTGGTTTGTGGAATGCATCAAATTCAGGTAAAGGTGTGGTTATTGGTATA
TTAGATTGTGGAATTGATCCTCATCATCCTTCATTTAATGATAATGGAATGCCTAATCCA
CCACTTAAATGGAAAGGCAAATGTGAGTTCAATGTTACAACTAATTGTAACAAGAAGCTT
ATTGGAGCAAGAAATTTTGTGCAACCGGATCTGTCCCCTACAGATGATTATGGACACGGG
ACACATACTTCAAGCACAGCCGCGGGAAACTTTGTGGATGGTGCCAATTTTTATGGTAAT
GCTAATGGCACGGCTGTTGGCATTGCGCCCCGAGCCCATGTGGCCATTTACAAAGTCTGT
GATGCATTTTATTGTCTAGAATACAAGATTTTAGCTGGTCTTGATGCTGCAATTGAAGAC
GGTGTGGATGTGATTTCCATTTCAATTGGATTCGGACACTTACGGTCTCCTTTATACGAT
GATAATATAGCTATTGGCACGTATAGCGCGATGGAGAAGGGGATTTTTGTAAGTTGCTCT
GCAGGAAATGGTGGACCGCGTAGTGGTACTGTGGAAAACGGGGCCCCGTGGATTCTCACA
GTTGGTGCTAGCACAACAGATAGAAAGATAAGTGCGGTTGCAGTTTTGGGTAACGGAGCT
GAGTATGAAGGCGAATCAGCTTTCCAACCAACGAATTTTTCGCAAAAATTGTTACCACTT
GTGAATGGTACAAATTGTGAATTGTTCAATACAAGCGATGTCAAGGGTAAAATAGTGTTG
TGTGATTCAAGCAGTGACTTGTCTAGAAAAGACATAGCAAGAATAGTGAAAAAAGCCGGT
GGTGCTGGCATGATTCTCATGAATGAAAAGTATGCTGGCTCTACAACATTCTCAGAATAT
GATGCCGTTCCCACGACACAGATTAGTTACAACGATGGACAAGAGATCACAAACTATATG
AAATCAACATCAACACCAGTTGCAACGATAACATTCAAGGGAACGAAGATTGGAGACAAG
CACGCCCCAACGGTTGCTTACTTTTCTTCTAGGGGACCATGTATGCAGAGTCAGGGCATA
CTAAAGCCGGACATTATTGGCCCTGGAGTGAATATCCTTGCAGCATGGCCAATCTCTATA
GGAGGTGAGACAACATCATTGACGTTTAACATCCTTTCTGGAACGTCGATGTCTTGCCCT
CTCCTTGCAGGAGTTGCAGCATTGTTAAAGAGCGCACATCCAGATTGGTCTCCAGCTGCA
ATTAAATCCGCAATCATGACCACAGCTGATATCATCAACCTTGGAAACGATCCAATTCAG
GACGAGACACTTGAACCTGCTGATCTACTTACAATCGGATCAGGACACGTGAATCCATCA
AGAGCAAATGATCCAGGACTAATTTATGACGTACAGCCCGAAGATTACATCCCATACTTA
TGTGGCTTGAATTATACAGATGATCAAGTCAGTGCCATTGTAAGAAAGAAGGTACATTGT
ACGTCAAGTATACCTCAATCAGAGTTGAACTACCCATCATTTTCAATTCCTAAGGAATCA
AATGCTCAAACATATACAAGGACTGTGACTAACATCGGAGAAGCAATTTCAGCTTACACA
GTTAAAGTATTTGGGCTCAAAGGCGTCGAGGTGACTGTTCAACCTAAAATCTTGAAATTT
ACAGCATTGAATCAGAAAGCGTCGTATAATGTAACAGTTAAGTCATTAGATCTTACAGGG
CATTCCCAAGGATACATAGTTTGGTCTTCTGATAGGTATTCTGTCAGAAGTCCAATAGAT
GTATTTCCCCATATCAGTGTGATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400068315
PEP Infomation

pacid=37476728 transcript=PGSC0003DMT400096640 locus=PGSC0003DMG400046211 ID=PGSC0003DMT400096640.v4.03 annot-version=v4.03
Sequence

MDLKFISTFLCFVLLHSSKTFGDHFTNQSDLETYIVHLEFPDQLFSNSKDLLLWHQSFLP
TNSNLSSHILYSYRHVFNGFAAMLSSDEVTEMEKKPGFVSARPQRIFQMHTTHAPSFLGL
HQNVGLWNASNSGKGVVIGILDCGIDPHHPSFNDNGMPNPPLKWKGKCEFNVTTNCNKKL
IGARNFVQPDLSPTDDYGHGTHTSSTAAGNFVDGANFYGNANGTAVGIAPRAHVAIYKVC
DAFYCLEYKILAGLDAAIEDGVDVISISIGFGHLRSPLYDDNIAIGTYSAMEKGIFVSCS
AGNGGPRSGTVENGAPWILTVGASTTDRKISAVAVLGNGAEYEGESAFQPTNFSQKLLPL
VNGTNCELFNTSDVKGKIVLCDSSSDLSRKDIARIVKKAGGAGMILMNEKYAGSTTFSEY
DAVPTTQISYNDGQEITNYMKSTSTPVATITFKGTKIGDKHAPTVAYFSSRGPCMQSQGI
LKPDIIGPGVNILAAWPISIGGETTSLTFNILSGTSMSCPLLAGVAALLKSAHPDWSPAA
IKSAIMTTADIINLGNDPIQDETLEPADLLTIGSGHVNPSRANDPGLIYDVQPEDYIPYL
CGLNYTDDQVSAIVRKKVHCTSSIPQSELNYPSFSIPKESNAQTYTRTVTNIGEAISAYT
VKVFGLKGVEVTVQPKILKFTALNQKASYNVTVKSLDLTGHSQGYIVWSSDRYSVRSPID
VFPHISVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400096640
Transcript Infomation

pacid=37476728 locus=PGSC0003DMG400046211 ID=PGSC0003DMT400096640.v4.03 annot-version=v4.03
Sequence

ATGGATCTGAAATTCATCTCTACCTTTCTCTGCTTTGTCCTGCTTCATTCATCAAAAACA
TTTGGTGATCATTTCACTAATCAAAGTGATTTAGAAACTTATATAGTACATCTTGAATTT
CCTGATCAACTTTTTTCAAATTCCAAAGATTTACTTCTCTGGCATCAATCATTTTTGCCT
ACAAATTCGAATCTCTCATCGCACATTCTATATTCTTATCGTCATGTGTTCAATGGTTTT
GCTGCTATGTTGTCATCAGACGAAGTGACAGAAATGGAAAAGAAGCCAGGTTTTGTGTCA
GCGCGTCCCCAACGAATATTTCAGATGCACACCACACACGCACCAAGTTTCCTTGGCTTG
CACCAGAATGTTGGTTTGTGGAATGCATCAAATTCAGGTAAAGGTGTGGTTATTGGTATA
TTAGATTGTGGAATTGATCCTCATCATCCTTCATTTAATGATAATGGAATGCCTAATCCA
CCACTTAAATGGAAAGGCAAATGTGAGTTCAATGTTACAACTAATTGTAACAAGAAGCTT
ATTGGAGCAAGAAATTTTGTGCAACCGGATCTGTCCCCTACAGATGATTATGGACACGGG
ACACATACTTCAAGCACAGCCGCGGGAAACTTTGTGGATGGTGCCAATTTTTATGGTAAT
GCTAATGGCACGGCTGTTGGCATTGCGCCCCGAGCCCATGTGGCCATTTACAAAGTCTGT
GATGCATTTTATTGTCTAGAATACAAGATTTTAGCTGGTCTTGATGCTGCAATTGAAGAC
GGTGTGGATGTGATTTCCATTTCAATTGGATTCGGACACTTACGGTCTCCTTTATACGAT
GATAATATAGCTATTGGCACGTATAGCGCGATGGAGAAGGGGATTTTTGTAAGTTGCTCT
GCAGGAAATGGTGGACCGCGTAGTGGTACTGTGGAAAACGGGGCCCCGTGGATTCTCACA
GTTGGTGCTAGCACAACAGATAGAAAGATAAGTGCGGTTGCAGTTTTGGGTAACGGAGCT
GAGTATGAAGGCGAATCAGCTTTCCAACCAACGAATTTTTCGCAAAAATTGTTACCACTT
GTGAATGGTACAAATTGTGAATTGTTCAATACAAGCGATGTCAAGGGTAAAATAGTGTTG
TGTGATTCAAGCAGTGACTTGTCTAGAAAAGACATAGCAAGAATAGTGAAAAAAGCCGGT
GGTGCTGGCATGATTCTCATGAATGAAAAGTATGCTGGCTCTACAACATTCTCAGAATAT
GATGCCGTTCCCACGACACAGATTAGTTACAACGATGGACAAGAGATCACAAACTATATG
AAATCAACATCAACACCAGTTGCAACGATAACATTCAAGGGAACGAAGATTGGAGACAAG
CACGCCCCAACGGTTGCTTACTTTTCTTCTAGGGGACCATGTATGCAGAGTCAGGGCATA
CTAAAGCCGGACATTATTGGCCCTGGAGTGAATATCCTTGCAGCATGGCCAATCTCTATA
GGAGGTGAGACAACATCATTGACGTTTAACATCCTTTCTGGAACGTCGATGTCTTGCCCT
CTCCTTGCAGGAGTTGCAGCATTGTTAAAGAGCGCACATCCAGATTGGTCTCCAGCTGCA
ATTAAATCCGCAATCATGACCACAGCTGATATCATCAACCTTGGAAACGATCCAATTCAG
GACGAGACACTTGAACCTGCTGATCTACTTACAATCGGATCAGGACACGTGAATCCATCA
AGAGCAAATGATCCAGGACTAATTTATGACGTACAGCCCGAAGATTACATCCCATACTTA
TGTGGCTTGAATTATACAGATGATCAAGTCAGTGCCATTGTAAGAAAGAAGGTACATTGT
ACGTCAAGTATACCTCAATCAGAGTTGAACTACCCATCATTTTCAATTCCTAAGGAATCA
AATGCTCAAACATATACAAGGACTGTGACTAACATCGGAGAAGCAATTTCAGCTTACACA
GTTAAAGTATTTGGGCTCAAAGGCGTCGAGGTGACTGTTCAACCTAAAATCTTGAAATTT
ACAGCATTGAATCAGAAAGCGTCGTATAATGTAACAGTTAAGTCATTAGATCTTACAGGG
CATTCCCAAGGATACATAGTTTGGTCTTCTGATAGGTATTCTGTCAGAAGTCCAATAGAT
GTATTTCCCCATATCAGTGTGATTTAA