Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400096638
CDS Infomation

pacid=37430469 polypeptide=PGSC0003DMP400068313 locus=PGSC0003DMG400046209 ID=PGSC0003DMT400096638.v4.03 annot-version=v4.03
Sequence

ATGGATGGTTGTCTGGCTAATTCCCCTGAAGATATAGTGAAGGAGATTTTGGTGAGGTGT
CCTGTGAAGTCGTTGTTGAGATTCAAATGCGTCTGTAAGAATTGGTGCACTCTTATCAAA
ACCCCTGAATTTGTTCAACAACACTTGAAAAATCATACCCCCCCTAAACTCTTGATTTAT
GATAATGGTGACATTGATGATGATGATGACGACCTTTCCATAACCTTGATTTCCGAAGAA
CATCCGCGAAGGTTCATAGGTATGAAACAACTCTTCGGTTCTGTGGATGGCTTGTTTTTT
ATGGTTGGAGAAATTGATCGTGAGGTTTCATGTGCATTATGGAATCCTGCGACTAGGGAG
GTGAAACCCCTCCATCTCCCTATCCCAGTAGCCACAATCCATGATTCCCCGGTGTTCGGG
TTTGGATTGGACCCCTTGACTTATGACTATAAAGTGGTTTACTTTCACATGAATAATTTG
TGTGAACATTATGCATCGGTCTACTCGTGTTCTAGGGACTTGTGGAGAATTTTCAAACCT
AAAATCCCCTACTTTACAGACGTCAAACACGCATTTGGTACTGCTTATTTGAATGGAACT
TATTACTGGCTGCTAATTGGGGGCCGCCATAGTAATTACACCATTCTTTTGTTCGACTTT
GGGAGTGAAATGTTTAAAGAGATTGAAGGGCCAGGTCATCAATCTGTTGATACTAACATG
TTGGGTTTGATGTTGGTTGATAGTTCCATTGCTATCTTGAACTTGAACCCGCGTACTGTG
TTTGCTTATGATATATGGGTAATGATCCAACCAGGTGTATGGAACAAACTTGTTACCTTT
CAATGCTTCTTTAGGATTAAGTCTTGTTTTGACAGCTCTCTCATTTTGGCAACTAAAGAT
TCTCAACTGGTCTCCTATGATGTTCGGACTAACAAGACGAGGCATCTTGGATTTCAACAT
CTGGGCTTGAGAAAAGATGCAGAGTATGATGGCGGTTGTGGAGTTTTTTATTATAAGGAG
AGCTTAGTGAAAATTAAACGACGAGAGGATGAAGATCTGGACCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400068313
PEP Infomation

pacid=37430469 transcript=PGSC0003DMT400096638 locus=PGSC0003DMG400046209 ID=PGSC0003DMT400096638.v4.03 annot-version=v4.03
Sequence

MDGCLANSPEDIVKEILVRCPVKSLLRFKCVCKNWCTLIKTPEFVQQHLKNHTPPKLLIY
DNGDIDDDDDDLSITLISEEHPRRFIGMKQLFGSVDGLFFMVGEIDREVSCALWNPATRE
VKPLHLPIPVATIHDSPVFGFGLDPLTYDYKVVYFHMNNLCEHYASVYSCSRDLWRIFKP
KIPYFTDVKHAFGTAYLNGTYYWLLIGGRHSNYTILLFDFGSEMFKEIEGPGHQSVDTNM
LGLMLVDSSIAILNLNPRTVFAYDIWVMIQPGVWNKLVTFQCFFRIKSCFDSSLILATKD
SQLVSYDVRTNKTRHLGFQHLGLRKDAEYDGGCGVFYYKESLVKIKRREDEDLDH*

Transcript Sequence

Transcript ID

PGSC0003DMT400096638
Transcript Infomation

pacid=37430469 locus=PGSC0003DMG400046209 ID=PGSC0003DMT400096638.v4.03 annot-version=v4.03
Sequence

ATGGATGGTTGTCTGGCTAATTCCCCTGAAGATATAGTGAAGGAGATTTTGGTGAGGTGT
CCTGTGAAGTCGTTGTTGAGATTCAAATGCGTCTGTAAGAATTGGTGCACTCTTATCAAA
ACCCCTGAATTTGTTCAACAACACTTGAAAAATCATACCCCCCCTAAACTCTTGATTTAT
GATAATGGTGACATTGATGATGATGATGACGACCTTTCCATAACCTTGATTTCCGAAGAA
CATCCGCGAAGGTTCATAGGTATGAAACAACTCTTCGGTTCTGTGGATGGCTTGTTTTTT
ATGGTTGGAGAAATTGATCGTGAGGTTTCATGTGCATTATGGAATCCTGCGACTAGGGAG
GTGAAACCCCTCCATCTCCCTATCCCAGTAGCCACAATCCATGATTCCCCGGTGTTCGGG
TTTGGATTGGACCCCTTGACTTATGACTATAAAGTGGTTTACTTTCACATGAATAATTTG
TGTGAACATTATGCATCGGTCTACTCGTGTTCTAGGGACTTGTGGAGAATTTTCAAACCT
AAAATCCCCTACTTTACAGACGTCAAACACGCATTTGGTACTGCTTATTTGAATGGAACT
TATTACTGGCTGCTAATTGGGGGCCGCCATAGTAATTACACCATTCTTTTGTTCGACTTT
GGGAGTGAAATGTTTAAAGAGATTGAAGGGCCAGGTCATCAATCTGTTGATACTAACATG
TTGGGTTTGATGTTGGTTGATAGTTCCATTGCTATCTTGAACTTGAACCCGCGTACTGTG
TTTGCTTATGATATATGGGTAATGATCCAACCAGGTGTATGGAACAAACTTGTTACCTTT
CAATGCTTCTTTAGGATTAAGTCTTGTTTTGACAGCTCTCTCATTTTGGCAACTAAAGAT
TCTCAACTGGTCTCCTATGATGTTCGGACTAACAAGACGAGGCATCTTGGATTTCAACAT
CTGGGCTTGAGAAAAGATGCAGAGTATGATGGCGGTTGTGGAGTTTTTTATTATAAGGAG
AGCTTAGTGAAAATTAAACGACGAGAGGATGAAGATCTGGACCATTAA