Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400096427
CDS Infomation

pacid=37438843 polypeptide=PGSC0003DMP400068102 locus=PGSC0003DMG400045998 ID=PGSC0003DMT400096427.v4.03 annot-version=v4.03
Sequence

ATGGACTGCAACAAAGAAAAGGCTATCAAGGCTAAAGGCGTTGCTGAAGAAATTATGGGA
AATAATAGAAAGAGGGCATCAACAAAATCAAGTGAAAATTGGGCAATATCTGATCATTTG
GCTGGGCAGAATCTCCAGTGTCTCAATGAGGAAAATCGGCTAAGATCTACGCGGCGTAGA
CATCGTATCAATTACTGTGATAATCTAAGTGATGATGAAGATTCTTCTAAGCGATTTAAG
GGGGTTGGATATCCTTCTCCTACTAAGGAGTCTGAGATGCAACATTTGTCTCATGCAGCA
ACTCCTAATGGAGAGAGAAAGAAACTAAAAGATTGTTTGTCCTATGAAGAGAGCTTCCAT
AACACAAAGATGGAAATTGAGACTACAAATGGAAGTGTTGATGTATGGCTTTGTACAATG
ACTGAGTCAAAATCATTTGAATATCCAGATCCAGATTTTAGCGATTTTGACAAGGACAAG
AACGAGTCCTGCTTTAAGGTTGGGCAAGTATGGGCTGTTTATGATACCTTGGATGGCATG
CCTAGATTTTATGGCATCATCAGGGAGATTTTGTCTCCGGAATTTAAATTGTGCATAACA
TGGTTAGAGCCGCTGAATGAAACCAAATGGCTATATGAGGGCTTTGTACCTTCTTATGGT
AGGTTCAAAATAGAAAACTTAGACCACATTGAAGATCATCTTATGTTCTCACATTTAGTA
TGTGCAACAAATGGAAACAACAATGATGCAATAAAGATATTTCCATTGAAAGGAGAAACT
TGGGCCCTCTTAAAAGATTGGGGCAATAAAAATCTCAACTATGAATTTGTTGAGATCTTG
TCAAACTATAATGAATCTATTGGTGTGCATGTTCCATACATGGATAAAACAAAAGGCTTC
ATGTGTCTTTTCCATAGGGTAGGAGACCTATTTCTAGTTCCAGCAAAGGGTATGTTTAGA
TTCTCTCATCGAATTCCTTCTATGAAGAAGACAGGGATGGAGAAGGATGATGTTCCTGAA
GGATCCTTTGAACTAGACCCTACCTCCTTACCTATATACCAAGTAGTTGTTTCTGCTTCA
TCCATAGACCAAAGTGCGATAGCTAATTTCATGGACTCTGTAAATTCTGCTGAAAATTGG
GTTGCACCAATACCTAATCAGGTTCCTAAACCTGAGTTTTACAAATTTGTTGTTGAGAGA
TCACCAGAGAAATTTAAAATTGGTCAATGTTGGGCAATATACAGCGATGAAGATGCCTTG
CCCCGGTACTATGGGCTGATAAAAAAGATAGATCTTCTCCCTCAGTTTGTGTTGCATGTG
GCATGGTTTTATGCGTGTCCACTCCCTAAAAGTACAATACAAGGGCATGATAAAACAATG
TCAATTGGTTGTGGATTGTTTAAGTTTTTAAATAGTAAGCTAAACAAATATACTGTAACC
AACAACTTTTCACATGTAGTAGTTGCAGAACCTTTGAAAAAGGGTGTACACAAGATCTTT
CCCAAAACAGGTGAAGTTTGGCCATTATACAAAAACTGGAGTGCTCAGCTGATGAAAGGT
AATAATCTAAAAGATTTTGATTATGAGATTGTTGAAATAGTGGATGTTTCCGATAATTAT
GTAGATGTAAAGTTCTTAGTGTGGGTAAAAAGGCTTCAAGTCTGTCTACAAGGCTCGATG
GAAGAAGAAGAGGCTGACAAAGGAGTGAAAATATATGTATCAGAGCATCTCAGGTTTTCT
CATCGAATTCCTGCTTTTCGCCTAACAGAAGAGAGAGGTGGCAGCTTGCGAGGTTTCTGG
GAGCTTGATCCAGCAGGATTGCCTCTGTGTTTACTATGTACTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400068102
PEP Infomation

pacid=37438843 transcript=PGSC0003DMT400096427 locus=PGSC0003DMG400045998 ID=PGSC0003DMT400096427.v4.03 annot-version=v4.03
Sequence

MDCNKEKAIKAKGVAEEIMGNNRKRASTKSSENWAISDHLAGQNLQCLNEENRLRSTRRR
HRINYCDNLSDDEDSSKRFKGVGYPSPTKESEMQHLSHAATPNGERKKLKDCLSYEESFH
NTKMEIETTNGSVDVWLCTMTESKSFEYPDPDFSDFDKDKNESCFKVGQVWAVYDTLDGM
PRFYGIIREILSPEFKLCITWLEPLNETKWLYEGFVPSYGRFKIENLDHIEDHLMFSHLV
CATNGNNNDAIKIFPLKGETWALLKDWGNKNLNYEFVEILSNYNESIGVHVPYMDKTKGF
MCLFHRVGDLFLVPAKGMFRFSHRIPSMKKTGMEKDDVPEGSFELDPTSLPIYQVVVSAS
SIDQSAIANFMDSVNSAENWVAPIPNQVPKPEFYKFVVERSPEKFKIGQCWAIYSDEDAL
PRYYGLIKKIDLLPQFVLHVAWFYACPLPKSTIQGHDKTMSIGCGLFKFLNSKLNKYTVT
NNFSHVVVAEPLKKGVHKIFPKTGEVWPLYKNWSAQLMKGNNLKDFDYEIVEIVDVSDNY
VDVKFLVWVKRLQVCLQGSMEEEEADKGVKIYVSEHLRFSHRIPAFRLTEERGGSLRGFW
ELDPAGLPLCLLCTD*

Transcript Sequence

Transcript ID

PGSC0003DMT400096427
Transcript Infomation

pacid=37438843 locus=PGSC0003DMG400045998 ID=PGSC0003DMT400096427.v4.03 annot-version=v4.03
Sequence

ATGGACTGCAACAAAGAAAAGGCTATCAAGGCTAAAGGCGTTGCTGAAGAAATTATGGGA
AATAATAGAAAGAGGGCATCAACAAAATCAAGTGAAAATTGGGCAATATCTGATCATTTG
GCTGGGCAGAATCTCCAGTGTCTCAATGAGGAAAATCGGCTAAGATCTACGCGGCGTAGA
CATCGTATCAATTACTGTGATAATCTAAGTGATGATGAAGATTCTTCTAAGCGATTTAAG
GGGGTTGGATATCCTTCTCCTACTAAGGAGTCTGAGATGCAACATTTGTCTCATGCAGCA
ACTCCTAATGGAGAGAGAAAGAAACTAAAAGATTGTTTGTCCTATGAAGAGAGCTTCCAT
AACACAAAGATGGAAATTGAGACTACAAATGGAAGTGTTGATGTATGGCTTTGTACAATG
ACTGAGTCAAAATCATTTGAATATCCAGATCCAGATTTTAGCGATTTTGACAAGGACAAG
AACGAGTCCTGCTTTAAGGTTGGGCAAGTATGGGCTGTTTATGATACCTTGGATGGCATG
CCTAGATTTTATGGCATCATCAGGGAGATTTTGTCTCCGGAATTTAAATTGTGCATAACA
TGGTTAGAGCCGCTGAATGAAACCAAATGGCTATATGAGGGCTTTGTACCTTCTTATGGT
AGGTTCAAAATAGAAAACTTAGACCACATTGAAGATCATCTTATGTTCTCACATTTAGTA
TGTGCAACAAATGGAAACAACAATGATGCAATAAAGATATTTCCATTGAAAGGAGAAACT
TGGGCCCTCTTAAAAGATTGGGGCAATAAAAATCTCAACTATGAATTTGTTGAGATCTTG
TCAAACTATAATGAATCTATTGGTGTGCATGTTCCATACATGGATAAAACAAAAGGCTTC
ATGTGTCTTTTCCATAGGGTAGGAGACCTATTTCTAGTTCCAGCAAAGGGTATGTTTAGA
TTCTCTCATCGAATTCCTTCTATGAAGAAGACAGGGATGGAGAAGGATGATGTTCCTGAA
GGATCCTTTGAACTAGACCCTACCTCCTTACCTATATACCAAGTAGTTGTTTCTGCTTCA
TCCATAGACCAAAGTGCGATAGCTAATTTCATGGACTCTGTAAATTCTGCTGAAAATTGG
GTTGCACCAATACCTAATCAGGTTCCTAAACCTGAGTTTTACAAATTTGTTGTTGAGAGA
TCACCAGAGAAATTTAAAATTGGTCAATGTTGGGCAATATACAGCGATGAAGATGCCTTG
CCCCGGTACTATGGGCTGATAAAAAAGATAGATCTTCTCCCTCAGTTTGTGTTGCATGTG
GCATGGTTTTATGCGTGTCCACTCCCTAAAAGTACAATACAAGGGCATGATAAAACAATG
TCAATTGGTTGTGGATTGTTTAAGTTTTTAAATAGTAAGCTAAACAAATATACTGTAACC
AACAACTTTTCACATGTAGTAGTTGCAGAACCTTTGAAAAAGGGTGTACACAAGATCTTT
CCCAAAACAGGTGAAGTTTGGCCATTATACAAAAACTGGAGTGCTCAGCTGATGAAAGGT
AATAATCTAAAAGATTTTGATTATGAGATTGTTGAAATAGTGGATGTTTCCGATAATTAT
GTAGATGTAAAGTTCTTAGTGTGGGTAAAAAGGCTTCAAGTCTGTCTACAAGGCTCGATG
GAAGAAGAAGAGGCTGACAAAGGAGTGAAAATATATGTATCAGAGCATCTCAGGTTTTCT
CATCGAATTCCTGCTTTTCGCCTAACAGAAGAGAGAGGTGGCAGCTTGCGAGGTTTCTGG
GAGCTTGATCCAGCAGGATTGCCTCTGTGTTTACTATGTACTGATTGA